Lus10028880.g (Linum usitatissimum)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Lus10028880.g T008862_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10028880 AP2 138 195
Lus10028880 AP2 237 289

Links

Other AP2 family TFs
Other Linum usitatissimum TFs

292 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_02064 Aegilops tauschii F775_02064 N 0.730
F775_02400 Aegilops tauschii F775_02400 I 0.753
F775_06373 Aegilops tauschii F775_06373 N 0.836
AMTR_s00019p00086450 Amborella trichopoda AMTR_s00019p00086450 I 0.807
AMTR_s00101p00022740 Amborella trichopoda AMTR_s00101p00022740 N 0.811
AMTR_s00202p00017170 Amborella trichopoda AMTR_s00202p00017170 N 0.784
Aquca_002_00506 Aquilegia coerulea Aquca_002_00506 I 0.735
Aquca_016_00348 Aquilegia coerulea Aquca_016_00348 I 0.792
Aquca_048_00034 Aquilegia coerulea Aquca_048_00034 I 0.802
Aquca_074_00065 Aquilegia coerulea Aquca_074_00065 I 0.769
ADAP Arabidopsis lyrata fgenesh2_kg.1__1760__AT1G16060.1 N 0.790
fgenesh2_kg.2__2276__AT1G79700.2 Arabidopsis lyrata fgenesh2_kg.2__2276__AT1G79700.2 I 0.797
WRI1 Arabidopsis lyrata fgenesh2_kg.5__1822__AT3G54320.1 N 0.857
ADAP Arabidopsis thaliana AT1G16060 I 0.785
AIL1 Arabidopsis thaliana AT1G72570 I 0.681
AT1G79700 Arabidopsis thaliana AT1G79700 I 0.791
WRI1 Arabidopsis thaliana AT3G54320 I 0.813
Bostr.0697s0045 Boechera stricta Bostr.0697s0045 I 0.813
Bostr.20129s0410 Boechera stricta Bostr.20129s0410 I 0.801
Bostr.7128s0222 Boechera stricta Bostr.7128s0222 N 0.790
BRADI1G64240 Brachypodium distachyon BRADI1G64240 I 0.682
BRADI2G18570 Brachypodium distachyon BRADI2G18570 I 0.753
BRADI2G48130 Brachypodium distachyon BRADI2G48130 N 0.782
BRADI3G36820 Brachypodium distachyon BRADI3G36820 N 0.797
BRADI4G30617 Brachypodium distachyon BRADI4G30617 I 0.812
BRADI4G43877 Brachypodium distachyon BRADI4G43877 I 0.829
Bo5g021520 Brassica oleracea Bo5g021520 N 0.789
Bo6g067950 Brassica oleracea Bo6g067950 I 0.817
Bo6g124080 Brassica oleracea Bo6g124080 N 0.805
Bo8g083590 Brassica oleracea Bo8g083590 I 0.813
Bra003178 Brassica rapa Bra003178 N 0.860
Bra007066 Brassica rapa Bra007066 N 0.856
Bra026082 Brassica rapa Bra026082 I 0.784
Bra035137 Brassica rapa Bra035137 I 0.802
PK04008.1 Cannabis sativa PK04008.1 I 0.805
PK24809.1 Cannabis sativa PK24809.1 I 0.765
PK26651.1 Cannabis sativa PK26651.1 I 0.796
Cagra.0562s0024 Capsella grandiflora Cagra.0562s0024 I 0.813
Cagra.1725s0044 Capsella grandiflora Cagra.1725s0044 I 0.789
Cagra.2238s0017 Capsella grandiflora Cagra.2238s0017 N 0.753
Carubv10010918m.g Capsella rubella Carubv10010918m.g N 0.781
Carubv10018845m.g Capsella rubella Carubv10018845m.g I 0.813
Carubv10020688m.g Capsella rubella Carubv10020688m.g N 0.797
evm.TU.contig_28586.3 Carica papaya evm.TU.contig_28586.3 N 0.771
evm.TU.supercontig_14.38 Carica papaya evm.TU.supercontig_14.38 N 0.818
evm.TU.supercontig_199.10 Carica papaya evm.TU.supercontig_199.10 I 0.802
evm.TU.supercontig_54.28 Carica papaya evm.TU.supercontig_54.28 N 0.865
Ca_03306 Cicer arietinum Ca_03306 N 0.779
Ca_10533 Cicer arietinum Ca_10533 N 0.804
Ca_17532 Cicer arietinum Ca_17532 N 0.828
Ca_20689 Cicer arietinum Ca_20689 N 0.818
Cla015555 Citrullus lanatus Cla015555 N 0.800
Cla017294 Citrullus lanatus Cla017294 N 0.773
Cla019044 Citrullus lanatus Cla019044 N 0.800
Cla020765 Citrullus lanatus Cla020765 N 0.860
Ciclev10003896m.g Citrus clementina Ciclev10003896m.g N 0.854
Ciclev10010237m.g Citrus clementina Ciclev10010237m.g N 0.809
Ciclev10013824m.g Citrus clementina Ciclev10013824m.g N 0.782
Ciclev10025985m.g Citrus clementina Ciclev10025985m.g I 0.797
Ciclev10033673m.g Citrus clementina Ciclev10033673m.g N 0.764
orange1.1g018990m.g Citrus sinensis orange1.1g018990m.g I 0.797
orange1.1g036423m.g Citrus sinensis orange1.1g036423m.g N 0.854
orange1.1g042319m.g Citrus sinensis orange1.1g042319m.g N 0.782
orange1.1g043551m.g Citrus sinensis orange1.1g043551m.g N 0.737
Cucsa.106090 Cucumis sativus Cucsa.106090 N 0.797
Cucsa.170790 Cucumis sativus Cucsa.170790 I 0.798
Cucsa.282940 Cucumis sativus Cucsa.282940 N 0.819
Eucgr.B03412 Eucalyptus grandis Eucgr.B03412 I 0.797
Eucgr.C00238 Eucalyptus grandis Eucgr.C00238 N 0.787
Eucgr.F03987 Eucalyptus grandis Eucgr.F03987 I 0.810
Eucgr.I01921 Eucalyptus grandis Eucgr.I01921 N 0.763
Eucgr.J00316 Eucalyptus grandis Eucgr.J00316 I 0.838
Eucgr.J02131 Eucalyptus grandis Eucgr.J02131 N 0.782
Thhalv10008118m.g Eutrema salsugineum Thhalv10008118m.g I 0.785
Thhalv10010394m.g Eutrema salsugineum Thhalv10010394m.g N 0.857
Thhalv10018877m.g Eutrema salsugineum Thhalv10018877m.g N 0.758
gene00377-v1.0-hybrid Fragaria vesca gene00377-v1.0-hybrid N 0.814
gene01262-v1.0-hybrid Fragaria vesca gene01262-v1.0-hybrid I 0.765
gene15913-v1.0-hybrid Fragaria vesca gene15913-v1.0-hybrid N 0.809
gene27659-v1.0-hybrid Fragaria vesca gene27659-v1.0-hybrid N 0.805
GLYMA02G36880 Glycine max GLYMA02G36880 I 0.795
GLYMA04G24010 Glycine max GLYMA04G24010 N 0.806
GLYMA06G30840 Glycine max GLYMA06G30840 N 0.805
GLYMA07G02380 Glycine max GLYMA07G02380 I 0.798
GLYMA08G23630 Glycine max GLYMA08G23630 I 0.828
GLYMA08G24420 Glycine max GLYMA08G24420 N 0.804
GLYMA08G40831 Glycine max GLYMA08G40831 N 0.770
GLYMA09G37540 Glycine max GLYMA09G37540 N 0.762
GLYMA15G34770 Glycine max GLYMA15G34770 N 0.807
GLYMA17G07860 Glycine max GLYMA17G07860 I 0.795
GLYMA18G16236 Glycine max GLYMA18G16236 N 0.771
GLYMA18G49101 Glycine max GLYMA18G49101 N 0.761
Gorai.001G256900 Gossypium raimondii Gorai.001G256900 N 0.815
Gorai.006G025100 Gossypium raimondii Gorai.006G025100 N 0.813
Gorai.008G182500 Gossypium raimondii Gorai.008G182500 N 0.773
Gorai.009G008800 Gossypium raimondii Gorai.009G008800 I 0.786
Gorai.009G122000 Gossypium raimondii Gorai.009G122000 I 0.799
Gorai.011G225700 Gossypium raimondii Gorai.011G225700 I 0.819
Gorai.012G056300 Gossypium raimondii Gorai.012G056300 N 0.794
Gorai.012G098200 Gossypium raimondii Gorai.012G098200 I 0.802
Gorai.013G003400 Gossypium raimondii Gorai.013G003400 I 0.789
LPERR01G30020 Leersia perrieri LPERR01G30020 N 0.737
LPERR05G19870 Leersia perrieri LPERR05G19870 I 0.760
LPERR08G13500 Leersia perrieri LPERR08G13500 N 0.816
LPERR09G07570 Leersia perrieri LPERR09G07570 N 0.813
LPERR12G01610 Leersia perrieri LPERR12G01610 N 0.833
Lus10001553.g Linum usitatissimum Lus10001553.g N 0.809
Lus10005253.g Linum usitatissimum Lus10005253.g N 0.775
Lus10008939.g Linum usitatissimum Lus10008939.g N 0.924
Lus10013268.g Linum usitatissimum Lus10013268.g N 0.760
Lus10024101.g Linum usitatissimum Lus10024101.g I 0.804
Lus10030671.g Linum usitatissimum Lus10030671.g N 0.775
Lus10030792.g Linum usitatissimum Lus10030792.g N 0.765
Lus10036719.g Linum usitatissimum Lus10036719.g I 0.768
Lus10037209.g Linum usitatissimum Lus10037209.g I 0.768
Lus10041618.g Linum usitatissimum Lus10041618.g I 0.808
chr2.CM0225.20.nc Lotus japonicus chr2.CM0225.20.nc N 0.788
chr2.CM0608.630.nc Lotus japonicus chr2.CM0608.630.nc N 0.784
chr6.CM0041.30.nd Lotus japonicus chr6.CM0041.30.nd N 0.809
LjSGA_030627.1 Lotus japonicus LjSGA_030627.1 N 0.730
MDP0000133423 Malus domestica MDP0000133423 N 0.805
MDP0000166059 Malus domestica MDP0000166059 N 0.777
MDP0000186581 Malus domestica MDP0000186581 N 0.766
MDP0000206674 Malus domestica MDP0000206674 N 0.754
MDP0000231748 Malus domestica MDP0000231748 N 0.808
MDP0000281784 Malus domestica MDP0000281784 I 0.766
MDP0000297698 Malus domestica MDP0000297698 N 0.766
MDP0000318457 Malus domestica MDP0000318457 N 0.805
cassava11368.m1 Manihot esculenta cassava11368.m1 N 0.805
cassava16315.m1 Manihot esculenta cassava16315.m1 N 0.856
cassava39084.m1 Manihot esculenta cassava39084.m1 I 0.768
MTR_2g460730 Medicago truncatula MTR_2g460730 N 0.809
MTR_4g007770 Medicago truncatula MTR_4g007770 N 0.830
MTR_4g130270 Medicago truncatula MTR_4g130270 I 0.776
MTR_6g011490 Medicago truncatula MTR_6g011490 N 0.802
MTR_7g009410 Medicago truncatula MTR_7g009410 N 0.782
MTR_8g044040 Medicago truncatula MTR_8g044040 N 0.801
MTR_8g044070 Medicago truncatula MTR_8g044070 N 0.829
MTR_8g468920 Medicago truncatula MTR_8g468920 N 0.787
EuGene.0000120285 Micromonas pusilla EuGene.0000120285 I 0.683
mg013664m Mimulus guttatus mg013664m N 0.804
mgf008907m Mimulus guttatus mgf008907m I 0.773
mgf017413m Mimulus guttatus mgf017413m N 0.764
mgf019116m Mimulus guttatus mgf019116m N 0.836
mgf019814m Mimulus guttatus mgf019814m N 0.810
GSMUA_Achr3G03630_001 Musa acuminata GSMUA_Achr3G03630_001 I 0.815
GSMUA_Achr5G04670_001 Musa acuminata GSMUA_Achr5G04670_001 N 0.794
GSMUA_Achr8G09350_001 Musa acuminata GSMUA_Achr8G09350_001 I 0.842
OBART01G34800 Oryza barthii OBART01G34800 N 0.688
OBART06G03040 Oryza barthii OBART06G03040 N 0.778
OBART09G10730 Oryza barthii OBART09G10730 N 0.813
OBART12G01740 Oryza barthii OBART12G01740 N 0.825
OB01G43640 Oryza brachyantha OB01G43640 N 0.756
OB05G31600 Oryza brachyantha OB05G31600 I 0.741
OB08G23780 Oryza brachyantha OB08G23780 N 0.707
OB09G17420 Oryza brachyantha OB09G17420 I 0.808
OB11G11380 Oryza brachyantha OB11G11380 I 0.833
OB12G11690 Oryza brachyantha OB12G11690 I 0.833
ORGLA01G0286200 Oryza glaberrima ORGLA01G0286200 N 0.688
ORGLA06G0029800 Oryza glaberrima ORGLA06G0029800 N 0.778
ORGLA08G0142100 Oryza glaberrima ORGLA08G0142100 I 0.785
ORGLA09G0079700 Oryza glaberrima ORGLA09G0079700 I 0.808
ORGLA11G0014900 Oryza glaberrima ORGLA11G0014900 I 0.833
ORGLA12G0015400 Oryza glaberrima ORGLA12G0015400 N 0.852
OGLUM01G38820 Oryza glumaepatula OGLUM01G38820 N 0.688
OGLUM08G17060 Oryza glumaepatula OGLUM08G17060 N 0.816
OGLUM09G11130 Oryza glumaepatula OGLUM09G11130 I 0.813
OGLUM11G01480 Oryza glumaepatula OGLUM11G01480 N 0.756
BGIOSGA004677 Oryza indica BGIOSGA004677 N 0.688
BGIOSGA017664 Oryza indica BGIOSGA017664 I 0.738
BGIOSGA021927 Oryza indica BGIOSGA021927 N 0.778
BGIOSGA028751 Oryza indica BGIOSGA028751 I 0.785
BGIOSGA030783 Oryza indica BGIOSGA030783 I 0.808
BGIOSGA034580 Oryza indica BGIOSGA034580 N 0.852
BGIOSGA036704 Oryza indica BGIOSGA036704 N 0.852
OLONG_002862 Oryza longistaminata OLONG_002862 N 0.785
OLONG_014256 Oryza longistaminata OLONG_014256 I 0.738
OMERI01G26790 Oryza meridionalis OMERI01G26790 I 0.760
OMERI06G03270 Oryza meridionalis OMERI06G03270 N 0.745
OMERI08G13500 Oryza meridionalis OMERI08G13500 N 0.816
OMERI09G08520 Oryza meridionalis OMERI09G08520 N 0.813
OMERI11G02080 Oryza meridionalis OMERI11G02080 N 0.852
OMERI12G00060 Oryza meridionalis OMERI12G00060 N 0.852
ONIVA01G39780 Oryza nivara ONIVA01G39780 N 0.688
ONIVA03G39530 Oryza nivara ONIVA03G39530 N 0.852
ONIVA06G03970 Oryza nivara ONIVA06G03970 N 0.778
ONIVA08G17820 Oryza nivara ONIVA08G17820 N 0.816
ONIVA09G10420 Oryza nivara ONIVA09G10420 I 0.808
ONIVA11G01800 Oryza nivara ONIVA11G01800 N 0.852
OPUNC05G21440 Oryza punctata OPUNC05G21440 I 0.738
OPUNC08G14310 Oryza punctata OPUNC08G14310 N 0.813
OPUNC09G09320 Oryza punctata OPUNC09G09320 N 0.785
OPUNC11G01540 Oryza punctata OPUNC11G01540 N 0.852
OPUNC12G01560 Oryza punctata OPUNC12G01560 N 0.852
ORUFI01G38130 Oryza rufipogon ORUFI01G38130 N 0.688
ORUFI06G03000 Oryza rufipogon ORUFI06G03000 N 0.778
ORUFI08G18170 Oryza rufipogon ORUFI08G18170 N 0.816
ORUFI09G11510 Oryza rufipogon ORUFI09G11510 N 0.813
OS05G0536250 Oryza sativa OS05G0536250 I 0.738
OS06G0145700 Oryza sativa OS06G0145700 N 0.762
OS08G0442400 Oryza sativa OS08G0442400 I 0.785
OS09G0423800 Oryza sativa OS09G0423800 I 0.808
OS12G0126300 Oryza sativa OS12G0126300 I 0.833
Pavir.Bb02213 Panicum virgatum Pavir.Bb02213 I 0.799
Pavir.Ea03213 Panicum virgatum Pavir.Ea03213 N 0.687
Pavir.Fa00925 Panicum virgatum Pavir.Fa00925 N 0.712
Pavir.Ia03819 Panicum virgatum Pavir.Ia03819 I 0.681
Pavir.J02216 Panicum virgatum Pavir.J02216 I 0.760
Pavir.J08481 Panicum virgatum Pavir.J08481 N 0.714
Pavir.J19507 Panicum virgatum Pavir.J19507 N 0.778
Pavir.J34675 Panicum virgatum Pavir.J34675 I 0.760
Pavir.J34903 Panicum virgatum Pavir.J34903 N 0.714
PDK_20s13009417g005 Phoenix dactylifera PDK_20s13009417g005 N 0.746
e_gw1.261.8.1 Physcomitrella patens e_gw1.261.8.1 N 0.775
e_gw1.32.189.1 Physcomitrella patens e_gw1.32.189.1 N 0.853
POPTR_0001s03300 Populus trichocarpa POPTR_0001s03300 I 0.802
POPTR_0003s18350 Populus trichocarpa POPTR_0003s18350 N 0.759
POPTR_0006s19360 Populus trichocarpa POPTR_0006s19360 N 0.748
POPTR_0008s01260 Populus trichocarpa POPTR_0008s01260 N 0.705
POPTR_0010s10290 Populus trichocarpa POPTR_0010s10290 N 0.781
POPTR_0010s25340 Populus trichocarpa POPTR_0010s25340 N 0.849
POPTR_0017s11470 Populus trichocarpa POPTR_0017s11470 N 0.805
POPTR_0018s11110 Populus trichocarpa POPTR_0018s11110 N 0.809
Pm006561 Prunus mume Pm006561 N 0.779
Pm008629 Prunus mume Pm008629 I 0.802
Pm013856 Prunus mume Pm013856 N 0.808
Pm015843 Prunus mume Pm015843 N 0.768
Pm015847 Prunus mume Pm015847 N 0.780
Pm017032 Prunus mume Pm017032 N 0.857
PRUPE_ppa007768mg Prunus persica PRUPE_ppa007768mg N 0.808
PRUPE_ppa022243mg Prunus persica PRUPE_ppa022243mg N 0.779
PRUPE_ppa022978mg Prunus persica PRUPE_ppa022978mg N 0.780
PRUPE_ppa023152mg Prunus persica PRUPE_ppa023152mg I 0.802
PRUPE_ppa024318mg Prunus persica PRUPE_ppa024318mg N 0.805
29822.m003477 Ricinus communis 29822.m003477 N 0.805
30069.m000440 Ricinus communis 30069.m000440 N 0.857
30114.m000507 Ricinus communis 30114.m000507 N 0.787
SapurV1A.0036s0830 Salix purpurea SapurV1A.0036s0830 N 0.812
SapurV1A.0070s0630 Salix purpurea SapurV1A.0070s0630 N 0.831
SapurV1A.0153s0330 Salix purpurea SapurV1A.0153s0330 I 0.802
SapurV1A.1535s0040 Salix purpurea SapurV1A.1535s0040 I 0.802
SapurV1A.1603s0090 Salix purpurea SapurV1A.1603s0090 I 0.802
SELMODRAFT_108361 Selaginella moellendorffii SELMODRAFT_108361 N 0.742
SELMODRAFT_129793 Selaginella moellendorffii SELMODRAFT_129793 N 0.791
SELMODRAFT_78076 Selaginella moellendorffii SELMODRAFT_78076 N 0.761
SELMODRAFT_85823 Selaginella moellendorffii SELMODRAFT_85823 N 0.852
Si004222m.g Setaria italica Si004222m.g N 0.687
Si007857m.g Setaria italica Si007857m.g N 0.781
Si012026m.g Setaria italica Si012026m.g N 0.827
Si013842m.g Setaria italica Si013842m.g N 0.811
Si022186m.g Setaria italica Si022186m.g I 0.760
Si026433m.g Setaria italica Si026433m.g N 0.827
Si030129m.g Setaria italica Si030129m.g I 0.806
Solyc01g096860.1 Solanum lycopersicum Solyc01g096860.1 I 0.802
Solyc03g117720.2 Solanum lycopersicum Solyc03g117720.2 I 0.795
Solyc06g066390.1 Solanum lycopersicum Solyc06g066390.1 N 0.762
Solyc06g068570.2 Solanum lycopersicum Solyc06g068570.2 I 0.776
Solyc12g010490.1 Solanum lycopersicum Solyc12g010490.1 N 0.775
PGSC0003DMG400002399 Solanum tuberosum PGSC0003DMG400002399 N 0.766
PGSC0003DMG400027502 Solanum tuberosum PGSC0003DMG400027502 N 0.851
Sb02g025080 Sorghum bicolor Sb02g025080 I 0.808
Sb03g037750 Sorghum bicolor Sb03g037750 N 0.726
Sb05g001790 Sorghum bicolor Sb05g001790 I 0.830
Sb07g021800 Sorghum bicolor Sb07g021800 N 0.819
Sb09g026800 Sorghum bicolor Sb09g026800 I 0.760
Sb10g003160 Sorghum bicolor Sb10g003160 N 0.778
TCM_011797 Theobroma cacao TCM_011797 N 0.772
TCM_018386 Theobroma cacao TCM_018386 N 0.776
TCM_027569 Theobroma cacao TCM_027569 I 0.804
TCM_038442 Theobroma cacao TCM_038442 N 0.805
TCM_044588 Theobroma cacao TCM_044588 I 0.823
Traes_1BL_3EFA4A82D Triticum aestivum Traes_1BL_3EFA4A82D N 0.715
Traes_4AL_C863DCEDC Triticum aestivum Traes_4AL_C863DCEDC N 0.770
Traes_5AL_F8DEBE8E7 Triticum aestivum Traes_5AL_F8DEBE8E7 I 0.833
Traes_5BL_B6C71B544 Triticum aestivum Traes_5BL_B6C71B544 I 0.813
Traes_5DL_2CF55DD05 Triticum aestivum Traes_5DL_2CF55DD05 I 0.833
Traes_7AS_A70A185F1 Triticum aestivum Traes_7AS_A70A185F1 N 0.781
TRIUR3_01982 Triticum urartu TRIUR3_01982 I 0.753
TRIUR3_04644 Triticum urartu TRIUR3_04644 N 0.694
TRIUR3_24036 Triticum urartu TRIUR3_24036 N 0.858
VIT_01s0026g01690 Vitis vinifera VIT_01s0026g01690 N 0.809
VIT_09s0018g01650 Vitis vinifera VIT_09s0018g01650 I 0.802
VIT_11s0037g00870 Vitis vinifera VIT_11s0037g00870 N 0.795
WRI1 Vitis vinifera VIT_13s0047g00340 N 0.786
VIT_14s0108g00050 Vitis vinifera VIT_14s0108g00050 N 0.805
GRMZM2G073982 Zea mays GRMZM2G073982 N 0.778
GRMZM2G113078 Zea mays GRMZM2G113078 I 0.760
GRMZM2G124524 Zea mays GRMZM2G124524 I 0.830
GRMZM2G131266 Zea mays GRMZM2G131266 N 0.829
GRMZM2G141219 Zea mays GRMZM2G141219 I 0.808
GRMZM2G174834 Zea mays GRMZM2G174834 I 0.857
GRMZM2G451031 Zea mays GRMZM2G451031 N 0.724