CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSDNOG00000013859
(
Dasypus novemcinctus
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
ENSDNOG00000013859
T033777_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Tcf4
M01750_2.00
Mus musculus
VCAGVTGBN
NVCABCTGB
PBM
Weirauch et al.(2014)
pTH5101
0.914
1.000
TCF4
M02807_2.00
Homo sapiens
HRCACCTGBN
NVCAGGTGYD
SELEX
Jolma et al.(2013)
TCF4_1
0.914
1.000
TCF4
M02808_2.00
Homo sapiens
NVCACCTBBN
NVVAGGTGBN
SELEX
Jolma et al.(2013)
TCF4_2
0.914
1.000
TCF4
M02728_2.00
Homo sapiens
RCACCTG
CAGGTGY
SELEX
Jolma et al.(2010)
TCF4_dimer
0.914
1.000
TCF4
M04214_2.00
Homo sapiens
VCACCTGB
VCAGGTGB
SELEX
Yin et al.(2017)
TCF4_eDBD_HT-SELEX
0.914
1.000
Tcf4
M08775_2.00
Mus musculus
HRCACCTGB
VCAGGTGYD
Misc
Kulakovskiy et al.(2013)
ITF2_MOUSE.H11MO.0.B
0.914
1.000
TCF4
M09461_2.00
Homo sapiens
ASWTCAAAGRVN
NBYCTTTGAWST
Misc
Heinz et al.(2010)
Hct116-Tcf4_SRA012054
0.914
1.000
TCF4
M04215_2.00
Homo sapiens
VCACCTGN
NCAGGTGB
SELEX
Yin et al.(2017)
TCF4_eDBD_Methyl-HT-SELEX
0.914
1.000
Tcf12
M01740_2.00
Mus musculus
NVCAYCTGB
VCAGRTGBN
PBM
Weirauch et al.(2014)
pTH5071
0.912
0.962
TCF12
M04137_2.00
Homo sapiens
VCACSTGB
VCASGTGB
SELEX
Yin et al.(2017)
TCF12_eDBD_HT-SELEX
0.912
0.962
Tcf12
M08062_2.00
Mus musculus
RRCAGCTGNNN
NNNCAGCTGYY
ChIP-seq
Mathelier et al.(2014)
MA0521.1
0.912
0.962
TCF12
M07805_2.00
Homo sapiens
NVDSCAGSTGB
VCASCTGSHBN
ChIP-seq
Gerstein et al.(2012)
GM12878_TCF12_HudsonAlpha
0.912
0.962
TCF12
M07806_2.00
Homo sapiens
VCASCTGB
VCAGSTGB
ChIP-seq
Gerstein et al.(2012)
H1-hESC_TCF12_HudsonAlpha
0.912
0.962
TCF12
M08731_2.00
Homo sapiens
CMCASCTGSH
DSCAGSTGKG
Misc
Kulakovskiy et al.(2013)
HTF4_HUMAN.H11MO.0.A
0.912
0.962
Tcf12
M08762_2.00
Mus musculus
VMCASCTGSH
DSCAGSTGKB
Misc
Kulakovskiy et al.(2013)
HTF4_MOUSE.H11MO.0.A
0.912
0.962
TCF12
M09458_2.00
Homo sapiens
NNVCAGCTGB
VCAGCTGBNN
Misc
Heinz et al.(2010)
GM12878-Tcf12_GSE32465
0.912
0.962
TCF12
M09858_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HEB_Q6
0.912
0.962
TCF12
M09859_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HTF4_Q2
0.912
0.962
TCF12
M09860_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TCF12_01
0.912
0.962
TCF12
M09861_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TCF12_03
0.912
0.962
TCF12
M09862_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TCF12_05
0.912
0.962
TCF12
M04138_2.00
Homo sapiens
NCAYCTGN
NCAGRTGN
SELEX
Yin et al.(2017)
TCF12_eDBD_Methyl-HT-SELEX
0.912
0.962
Tcf3
M00753_2.00
Mus musculus
VCACCTGBN
NVCAGGTGB
PBM
Weirauch et al.(2013)
pTH3866
0.912
0.885
Tcf3
M01723_2.00
Mus musculus
NNVCACSTGB
VCASGTGBNN
PBM
Weirauch et al.(2014)
pTH4580
0.912
0.885
Tcf3
M00118_2.00
Mus musculus
VCAYCTGB
VCAGRTGB
PBM
Badis et al.(2009)
Tcfe2a_3865
0.912
0.885
Tcf3
M09465_2.00
Mus musculus
ABWTCAAAGS
SCTTTGAWVT
Misc
Heinz et al.(2010)
mES-Tcf3_GSE11724
0.884
0.923
Tcf3
M09466_2.00
Mus musculus
VCAGCTGBNN
NNVCAGCTGB
Misc
Heinz et al.(2010)
proBcell-E2A_GSE21978
0.884
0.923
Tcf3
M09886_2.00
Mus musculus
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E47_05
0.884
0.923
TCF3
M02775_2.00
Homo sapiens
NVCACCTGBN
NVCAGGTGBN
SELEX
Jolma et al.(2013)
TCF3_1
0.884
0.885
TCF3
M08710_2.00
Homo sapiens
VVCASCTGCHN
NDGCAGSTGBB
Misc
Kulakovskiy et al.(2013)
TFE2_HUMAN.H11MO.0.A
0.884
0.885
TCF3
M09791_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E12_Q6
0.884
0.885
TCF3
M09792_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E2A_Q6_01
0.884
0.885
TCF3
M09793_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E2A_Q6_02
0.884
0.885
TCF3
M09794_2.00
Homo sapiens
VVVVMCACCTGCNBB
VVNGCAGGTGKBBBB
Transfac
Matys et al.(2006)
V$E47_01
0.884
0.885
TCF3
M09795_2.00
Homo sapiens
NNKWRCACCTGYDNNN
NNNHRCAGGTGYWMNN
Transfac
Matys et al.(2006)
V$E47_02
0.884
0.885
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSDNOP00000010753
bHLH
400
453
RRMANNARERLRVRDINEAFKELGRMVQLHLKSDKPQTKLLILHQAVAVILSLE
Links
Other
bHLH
family TFs
Other
Dasypus novemcinctus
TFs
212 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AMTR_s00133p00020030
Amborella trichopoda
AMTR_s00133p00020030
N
Aquca_002_00510
Aquilegia coerulea
Aquca_002_00510
N
ATWHY3
Arabidopsis lyrata
fgenesh2_kg.5__172__AT2G02740.1
N
ATWHY1
Arabidopsis lyrata
fgenesh2_kg.1__1569__AT1G14410.1
N
WHY3
Arabidopsis thaliana
AT2G02740
N
Bostr.0556s0088
Boechera stricta
Bostr.0556s0088
N
BRADI1G51040
Brachypodium distachyon
BRADI1G51040
N
Bo8g066030
Brassica oleracea
Bo8g066030
N
Bo7g080560
Brassica oleracea
Bo7g080560
N
Bra016702
Brassica rapa
Bra016702
N
Bra024809
Brassica rapa
Bra024809
N
PK22670.1
Cannabis sativa
PK22670.1
N
Cagra.0534s0030
Capsella grandiflora
Cagra.0534s0030
N
Cagra.3501s0060
Capsella grandiflora
Cagra.3501s0060
N
Carubv10010024m.g
Capsella rubella
Carubv10010024m.g
N
Carubv10017841m.g
Capsella rubella
Carubv10017841m.g
N
evm.TU.supercontig_1007.4
Carica papaya
evm.TU.supercontig_1007.4
N
Ca_24297
Cicer arietinum
Ca_24297
N
Cla022217
Citrullus lanatus
Cla022217
N
Ciclev10032427m.g
Citrus clementina
Ciclev10032427m.g
N
orange1.1g024467m.g
Citrus sinensis
orange1.1g024467m.g
N
Cucsa.005520
Cucumis sativus
Cucsa.005520
N
Eucgr.G02539
Eucalyptus grandis
Eucgr.G02539
N
Thhalv10004763m.g
Eutrema salsugineum
Thhalv10004763m.g
N
GLYMA18G16200
Glycine max
GLYMA18G16200
N
GLYMA08G40850
Glycine max
GLYMA08G40850
N
Gorai.013G077400
Gossypium raimondii
Gorai.013G077400
N
MLOC_11586
Hordeum vulgare
MLOC_11586
N
LPERR06G02670
Leersia perrieri
LPERR06G02670
N
Lus10036723.g
Linum usitatissimum
Lus10036723.g
N
LjSGA_053590.1
Lotus japonicus
LjSGA_053590.1
N
MDP0000268451
Malus domestica
MDP0000268451
N
cassava35817.valid.m1
Manihot esculenta
cassava35817.valid.m1
N
MTR_8g468570
Medicago truncatula
MTR_8g468570
N
mgf002465m
Mimulus guttatus
mgf002465m
N
GSMUA_Achr10G21100_001
Musa acuminata
GSMUA_Achr10G21100_001
N
OBART06G03050
Oryza barthii
OBART06G03050
N
ORGLA06G0029900
Oryza glaberrima
ORGLA06G0029900
N
BGIOSGA022297
Oryza indica
BGIOSGA022297
N
OMERI06G03280
Oryza meridionalis
OMERI06G03280
N
OMERI07G11550
Oryza meridionalis
OMERI07G11550
N
ONIVA06G03980
Oryza nivara
ONIVA06G03980
N
OPUNC06G02750
Oryza punctata
OPUNC06G02750
N
ORUFI06G03010
Oryza rufipogon
ORUFI06G03010
N
OS06G0145800
Oryza sativa
OS06G0145800
N
Pavir.Db02235
Panicum virgatum
Pavir.Db02235
N
Pavir.Da02402
Panicum virgatum
Pavir.Da02402
N
POPTR_0008s14840
Populus trichocarpa
POPTR_0008s14840
N
POPTR_0010s10260
Populus trichocarpa
POPTR_0010s10260
N
Pm006558
Prunus mume
Pm006558
N
PRUPE_ppa009776mg
Prunus persica
PRUPE_ppa009776mg
N
29736.m002027
Ricinus communis
29736.m002027
N
SapurV1A.0609s0180
Salix purpurea
SapurV1A.0609s0180
N
Si006951m.g
Setaria italica
Si006951m.g
N
Solyc05g007100.2
Solanum lycopersicum
Solyc05g007100.2
N
PGSC0003DMG400017627
Solanum tuberosum
PGSC0003DMG400017627
N
Sb10g003170
Sorghum bicolor
Sb10g003170
N
TCM_011795
Theobroma cacao
TCM_011795
N
Traes_7DS_B1FD1C84F
Triticum aestivum
Traes_7DS_B1FD1C84F
N
Traes_4AL_FE94301FD
Triticum aestivum
Traes_4AL_FE94301FD
N
VIT_01s0026g01720
Vitis vinifera
VIT_01s0026g01720
N
GRMZM2G155662
Zea mays
GRMZM2G155662
N