CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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brk
(
Drosophila willistoni
)
Brinker
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF09607 (BrkDBD)
IPR018586
FBgn0218144
T055673_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
brk
M03628_2.00
Drosophila melanogaster
WRGCGCCGGCGCYW
WRGCGCCGGCGCYW
SELEX
Nitta et al.(2015)
brk_1
0.966
0.966
brk
M03629_2.00
Drosophila melanogaster
WRGCGCCAGGCGCYW
WRGCGCCTGGCGCYW
SELEX
Nitta et al.(2015)
brk_2
0.966
0.966
brk
M03630_2.00
Drosophila melanogaster
WRGCGCCATGGCGCYW
WRGCGCCATGGCGCYW
SELEX
Nitta et al.(2015)
brk_3
0.966
0.966
brk
M06013_2.00
Drosophila melanogaster
RGCGCCRS
SYGGCGCY
B1H
Zhu et al.(2011)
brk_FlyReg_FBgn0024250
0.966
0.966
brk
M07539_2.00
Drosophila melanogaster
RGCGCCRS
SYGGCGCY
DNaseI footprinting
Mathelier et al.(2014)
MA0213.1
0.966
0.966
brk
M09658_2.00
Drosophila melanogaster
BHRRCGCCABBHVV
BBDVVTGGCGYYDV
Misc
Kulakovskiy et al.(2009)
brk
0.966
0.966
brk
M09903_2.00
Drosophila melanogaster
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
I$BRK_Q6
0.966
0.966
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0245285
Brinker
83
140
GSRRIFTPQFKLQVLESYRNDNDCKGNQRATARKYNIHRRQIQKWLQCELNLRSSVAN
Links
Other
Brinker
family TFs
Other
Drosophila willistoni
TFs
17 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
F775_24151
Aegilops tauschii
F775_24151
I
AMTR_s00070p00149100
Amborella trichopoda
AMTR_s00070p00149100
I
Aquca_009_00280
Aquilegia coerulea
Aquca_009_00280
I
Aquca_058_00134
Aquilegia coerulea
Aquca_058_00134
I
fgenesh2_kg.1__4183__AT1G51140.1
Arabidopsis lyrata
fgenesh2_kg.1__4183__AT1G51140.1
I
fgenesh2_kg.4__2475__AT2G43140.1
Arabidopsis lyrata
fgenesh2_kg.4__2475__AT2G43140.1
I
fgenesh2_kg.6__2924__AT4G09180.1
Arabidopsis lyrata
fgenesh2_kg.6__2924__AT4G09180.1
I
scaffold_103992.1
Arabidopsis lyrata
scaffold_103992.1
I
scaffold_403077.1
Arabidopsis lyrata
scaffold_403077.1
I
BHLH80
Arabidopsis thaliana
AT1G35460
D
BHLH122
Arabidopsis thaliana
AT1G51140
D
AT2G42280
Arabidopsis thaliana
AT2G42280
D
AT2G43140
Arabidopsis thaliana
AT2G43140
I
BHLH81
Arabidopsis thaliana
AT4G09180
I
Bostr.1774s0027
Boechera stricta
Bostr.1774s0027
I
Bostr.25463s0393
Boechera stricta
Bostr.25463s0393
I
Bostr.25993s0461
Boechera stricta
Bostr.25993s0461
I
Bostr.26675s0074
Boechera stricta
Bostr.26675s0074
I
BRADI3G39927
Brachypodium distachyon
BRADI3G39927
I
Bo3g036400
Brassica oleracea
Bo3g036400
I
Bo4g019620
Brassica oleracea
Bo4g019620
I
Bo4g191390
Brassica oleracea
Bo4g191390
I
Bo6g024810
Brassica oleracea
Bo6g024810
I
Bo6g043840
Brassica oleracea
Bo6g043840
I
Bo8g026850
Brassica oleracea
Bo8g026850
I
Bra000291
Brassica rapa
Bra000291
I
Bra004748
Brassica rapa
Bra004748
I
Bra016886
Brassica rapa
Bra016886
I
Bra018896
Brassica rapa
Bra018896
I
Bra028088
Brassica rapa
Bra028088
I
Bra036760
Brassica rapa
Bra036760
I
PK06301.1
Cannabis sativa
PK06301.1
I
PK07850.1
Cannabis sativa
PK07850.1
I
PK14093.1
Cannabis sativa
PK14093.1
I
PK18038.1
Cannabis sativa
PK18038.1
I
PK20089.1
Cannabis sativa
PK20089.1
I
Cagra.18223s0002
Capsella grandiflora
Cagra.18223s0002
I
Cagra.2093s0006
Capsella grandiflora
Cagra.2093s0006
I
Cagra.2636s0012
Capsella grandiflora
Cagra.2636s0012
I
Cagra.3706s0004
Capsella grandiflora
Cagra.3706s0004
I
Cagra.9781s0002
Capsella grandiflora
Cagra.9781s0002
I
Carubv10001721m.g
Capsella rubella
Carubv10001721m.g
I
Carubv10009458m.g
Capsella rubella
Carubv10009458m.g
I
Carubv10010050m.g
Capsella rubella
Carubv10010050m.g
I
Carubv10023498m.g
Capsella rubella
Carubv10023498m.g
I
Carubv10023683m.g
Capsella rubella
Carubv10023683m.g
I
evm.TU.contig_45766
Carica papaya
evm.TU.contig_45766
I
evm.TU.supercontig_84.89
Carica papaya
evm.TU.supercontig_84.89
I
evm.TU.supercontig_85.115
Carica papaya
evm.TU.supercontig_85.115
I
Ca_02662
Cicer arietinum
Ca_02662
I
Ca_14223
Cicer arietinum
Ca_14223
I
Ca_26916
Cicer arietinum
Ca_26916
I
Cla015469
Citrullus lanatus
Cla015469
I
Cla017792
Citrullus lanatus
Cla017792
I
Ciclev10002083m.g
Citrus clementina
Ciclev10002083m.g
I
Ciclev10005233m.g
Citrus clementina
Ciclev10005233m.g
I
Ciclev10015437m.g
Citrus clementina
Ciclev10015437m.g
I
Ciclev10031622m.g
Citrus clementina
Ciclev10031622m.g
I
orange1.1g015337m.g
Citrus sinensis
orange1.1g015337m.g
I
orange1.1g016638m.g
Citrus sinensis
orange1.1g016638m.g
I
orange1.1g018007m.g
Citrus sinensis
orange1.1g018007m.g
I
orange1.1g023215m.g
Citrus sinensis
orange1.1g023215m.g
I
Cucsa.050160
Cucumis sativus
Cucsa.050160
I
Cucsa.061590
Cucumis sativus
Cucsa.061590
I
Cucsa.242910
Cucumis sativus
Cucsa.242910
I
Eucgr.A02417
Eucalyptus grandis
Eucgr.A02417
I
Eucgr.B03669
Eucalyptus grandis
Eucgr.B03669
I
Eucgr.G03396
Eucalyptus grandis
Eucgr.G03396
I
Eucgr.J00796
Eucalyptus grandis
Eucgr.J00796
I
Thhalv10011463m.g
Eutrema salsugineum
Thhalv10011463m.g
I
Thhalv10016998m.g
Eutrema salsugineum
Thhalv10016998m.g
I
Thhalv10028883m.g
Eutrema salsugineum
Thhalv10028883m.g
I
gene00545-v1.0-hybrid
Fragaria vesca
gene00545-v1.0-hybrid
I
gene20622-v1.0-hybrid
Fragaria vesca
gene20622-v1.0-hybrid
I
gene26880-v1.0-hybrid
Fragaria vesca
gene26880-v1.0-hybrid
I
gene26967-v1.0-hybrid
Fragaria vesca
gene26967-v1.0-hybrid
I
GLYMA02G29830
Glycine max
GLYMA02G29830
I
GLYMA08G16190
Glycine max
GLYMA08G16190
I
GLYMA08G26110
Glycine max
GLYMA08G26110
I
GLYMA10G12150
Glycine max
GLYMA10G12150
I
GLYMA11G13960
Glycine max
GLYMA11G13960
I
GLYMA12G05930
Glycine max
GLYMA12G05930
I
GLYMA12G36750
Glycine max
GLYMA12G36750
I
GLYMA13G27455
Glycine max
GLYMA13G27455
I
GLYMA13G41670
Glycine max
GLYMA13G41670
I
GLYMA15G03740
Glycine max
GLYMA15G03740
I
GLYMA15G42680
Glycine max
GLYMA15G42680
I
GLYMA19G32600
Glycine max
GLYMA19G32600
I
GLYMA20G39220
Glycine max
GLYMA20G39220
I
Gorai.002G228900
Gossypium raimondii
Gorai.002G228900
I
Gorai.004G035800
Gossypium raimondii
Gorai.004G035800
I
Gorai.006G140200
Gossypium raimondii
Gorai.006G140200
I
Gorai.009G071900
Gossypium raimondii
Gorai.009G071900
I
Gorai.011G144600
Gossypium raimondii
Gorai.011G144600
I
Gorai.013G138300
Gossypium raimondii
Gorai.013G138300
I
MLOC_67834
Hordeum vulgare
MLOC_67834
I
LPERR02G18900
Leersia perrieri
LPERR02G18900
I
LPERR08G16800
Leersia perrieri
LPERR08G16800
I
LPERR09G10800
Leersia perrieri
LPERR09G10800
I
Lus10021023.g
Linum usitatissimum
Lus10021023.g
I
Lus10031255.g
Linum usitatissimum
Lus10031255.g
I
Lus10031826.g
Linum usitatissimum
Lus10031826.g
I
chr1.CM0318.250.nd
Lotus japonicus
chr1.CM0318.250.nd
I
chr5.LjT42F22.20.nc
Lotus japonicus
chr5.LjT42F22.20.nc
I
MDP0000180376
Malus domestica
MDP0000180376
I
MDP0000269890
Malus domestica
MDP0000269890
I
MDP0000273574
Malus domestica
MDP0000273574
I
MDP0000307685
Malus domestica
MDP0000307685
I
cassava13743.valid.m1
Manihot esculenta
cassava13743.valid.m1
I
cassava2126.valid.m1
Manihot esculenta
cassava2126.valid.m1
I
cassava29651.valid.m1
Manihot esculenta
cassava29651.valid.m1
I
cassava30692.valid.m1
Manihot esculenta
cassava30692.valid.m1
I
cassava35513.valid.m1
Manihot esculenta
cassava35513.valid.m1
I
cassava35967.valid.m1
Manihot esculenta
cassava35967.valid.m1
I
cassava36544.valid.m1
Manihot esculenta
cassava36544.valid.m1
I
cassava44054.valid.m1
Manihot esculenta
cassava44054.valid.m1
I
MTR_2g098310
Medicago truncatula
MTR_2g098310
I
MTR_3g027650
Medicago truncatula
MTR_3g027650
I
MTR_3g028520
Medicago truncatula
MTR_3g028520
I
MTR_4g033295
Medicago truncatula
MTR_4g033295
I
mgf002701m
Mimulus guttatus
mgf002701m
I
mgf005043m
Mimulus guttatus
mgf005043m
I
mgf016734m
Mimulus guttatus
mgf016734m
I
GSMUA_Achr3G11110_001
Musa acuminata
GSMUA_Achr3G11110_001
I
GSMUA_Achr5G22310_001
Musa acuminata
GSMUA_Achr5G22310_001
I
GSMUA_Achr6G21220_001
Musa acuminata
GSMUA_Achr6G21220_001
I
GSMUA_Achr7G20490_001
Musa acuminata
GSMUA_Achr7G20490_001
I
GSMUA_Achr9G27780_001
Musa acuminata
GSMUA_Achr9G27780_001
I
OBART02G23210
Oryza barthii
OBART02G23210
I
OBART08G19860
Oryza barthii
OBART08G19860
I
OBART09G14660
Oryza barthii
OBART09G14660
I
OB02G30670
Oryza brachyantha
OB02G30670
I
OB08G26810
Oryza brachyantha
OB08G26810
I
ORGLA02G0200100
Oryza glaberrima
ORGLA02G0200100
I
ORGLA08G0174800
Oryza glaberrima
ORGLA08G0174800
I
ORGLA09G0112900
Oryza glaberrima
ORGLA09G0112900
I
OGLUM08G21000
Oryza glumaepatula
OGLUM08G21000
I
OGLUM09G15300
Oryza glumaepatula
OGLUM09G15300
I
BGIOSGA008576
Oryza indica
BGIOSGA008576
I
BGIOSGA028963
Oryza indica
BGIOSGA028963
I
BGIOSGA031008
Oryza indica
BGIOSGA031008
I
OLONG_009256
Oryza longistaminata
OLONG_009256
I
OMERI02G22740
Oryza meridionalis
OMERI02G22740
I
OMERI08G16700
Oryza meridionalis
OMERI08G16700
I
OMERI09G11370
Oryza meridionalis
OMERI09G11370
I
ONIVA02G26110
Oryza nivara
ONIVA02G26110
I
ONIVA08G17500
Oryza nivara
ONIVA08G17500
I
ONIVA08G22410
Oryza nivara
ONIVA08G22410
I
OPUNC02G21170
Oryza punctata
OPUNC02G21170
I
OPUNC08G18020
Oryza punctata
OPUNC08G18020
I
OPUNC09G13060
Oryza punctata
OPUNC09G13060
I
ORUFI02G24640
Oryza rufipogon
ORUFI02G24640
I
ORUFI08G22260
Oryza rufipogon
ORUFI08G22260
I
ORUFI09G15820
Oryza rufipogon
ORUFI09G15820
I
OS08G0506700
Oryza sativa
OS08G0506700
D
OS09G0487900
Oryza sativa
OS09G0487900
I
Pavir.Aa01423
Panicum virgatum
Pavir.Aa01423
I
Pavir.Ab02229
Panicum virgatum
Pavir.Ab02229
I
Pavir.Ba01718
Panicum virgatum
Pavir.Ba01718
I
Pavir.Ga01365
Panicum virgatum
Pavir.Ga01365
I
Pavir.Gb01377
Panicum virgatum
Pavir.Gb01377
I
Pavir.J00377
Panicum virgatum
Pavir.J00377
I
Pavir.J08536
Panicum virgatum
Pavir.J08536
I
Pavir.J14004
Panicum virgatum
Pavir.J14004
I
PDK_20s1302565g001
Phoenix dactylifera
PDK_20s1302565g001
I
PDK_20s1391471g001
Phoenix dactylifera
PDK_20s1391471g001
I
PDK_20s1484071g001
Phoenix dactylifera
PDK_20s1484071g001
I
PDK_20s1630671g001
Phoenix dactylifera
PDK_20s1630671g001
I
e_gw1.34.393.1
Physcomitrella patens
e_gw1.34.393.1
I
gw1.185.89.1
Physcomitrella patens
gw1.185.89.1
I
POPTR_0001s27680
Populus trichocarpa
POPTR_0001s27680
I
POPTR_0003s22290
Populus trichocarpa
POPTR_0003s22290
I
POPTR_0006s05640
Populus trichocarpa
POPTR_0006s05640
I
POPTR_0009s06910
Populus trichocarpa
POPTR_0009s06910
I
POPTR_0016s05100
Populus trichocarpa
POPTR_0016s05100
I
Pm000447
Prunus mume
Pm000447
I
Pm004181
Prunus mume
Pm004181
I
Pm007619
Prunus mume
Pm007619
I
Pm016406
Prunus mume
Pm016406
I
Pm025821
Prunus mume
Pm025821
I
PRUPE_ppa006134mg
Prunus persica
PRUPE_ppa006134mg
I
PRUPE_ppa006295mg
Prunus persica
PRUPE_ppa006295mg
I
PRUPE_ppa011017mg
Prunus persica
PRUPE_ppa011017mg
I
PRUPE_ppa019977mg
Prunus persica
PRUPE_ppa019977mg
I
PRUPE_ppa025178mg
Prunus persica
PRUPE_ppa025178mg
I
29216.m000261
Ricinus communis
29216.m000261
I
30149.m000231
Ricinus communis
30149.m000231
I
30152.m002405
Ricinus communis
30152.m002405
I
30169.m006403
Ricinus communis
30169.m006403
I
SapurV1A.0009s0400
Salix purpurea
SapurV1A.0009s0400
I
SapurV1A.0018s0320
Salix purpurea
SapurV1A.0018s0320
I
SapurV1A.0027s0090
Salix purpurea
SapurV1A.0027s0090
I
SapurV1A.0071s0010
Salix purpurea
SapurV1A.0071s0010
I
SapurV1A.0111s0030
Salix purpurea
SapurV1A.0111s0030
I
SapurV1A.0133s0050
Salix purpurea
SapurV1A.0133s0050
I
SapurV1A.0391s0050
Salix purpurea
SapurV1A.0391s0050
I
SapurV1A.0402s0180
Salix purpurea
SapurV1A.0402s0180
I
SapurV1A.0529s0060
Salix purpurea
SapurV1A.0529s0060
I
SapurV1A.0690s0120
Salix purpurea
SapurV1A.0690s0120
I
SapurV1A.1647s0020
Salix purpurea
SapurV1A.1647s0020
I
SapurV1A.1898s0040
Salix purpurea
SapurV1A.1898s0040
I
Si010513m.g
Setaria italica
Si010513m.g
I
Si017194m.g
Setaria italica
Si017194m.g
I
Si029614m.g
Setaria italica
Si029614m.g
I
Solyc01g086870.2
Solanum lycopersicum
Solyc01g086870.2
I
Solyc06g065040.2
Solanum lycopersicum
Solyc06g065040.2
I
Solyc09g098110.2
Solanum lycopersicum
Solyc09g098110.2
I
Solyc10g079050.1
Solanum lycopersicum
Solyc10g079050.1
I
Solyc12g100140.1
Solanum lycopersicum
Solyc12g100140.1
I
PGSC0003DMG400006569
Solanum tuberosum
PGSC0003DMG400006569
I
PGSC0003DMG400008153
Solanum tuberosum
PGSC0003DMG400008153
I
PGSC0003DMG400023852
Solanum tuberosum
PGSC0003DMG400023852
I
PGSC0003DMG400025263
Solanum tuberosum
PGSC0003DMG400025263
I
PGSC0003DMG400031314
Solanum tuberosum
PGSC0003DMG400031314
I
Sb02g028300
Sorghum bicolor
Sb02g028300
I
Sb04g025260
Sorghum bicolor
Sb04g025260
I
Sb06g020810
Sorghum bicolor
Sb06g020810
I
TCM_005925
Theobroma cacao
TCM_005925
I
TCM_020066
Theobroma cacao
TCM_020066
I
TCM_024842
Theobroma cacao
TCM_024842
I
TCM_036484
Theobroma cacao
TCM_036484
I
TCM_040564
Theobroma cacao
TCM_040564
I
Traes_7AS_4FAB72487
Triticum aestivum
Traes_7AS_4FAB72487
I
Traes_7DS_B671A4EAD
Triticum aestivum
Traes_7DS_B671A4EAD
I
TRIUR3_26625
Triticum urartu
TRIUR3_26625
I
VIT_05s0124g00240
Vitis vinifera
VIT_05s0124g00240
I
VIT_06s0004g01740
Vitis vinifera
VIT_06s0004g01740
I
VIT_08s0007g07810
Vitis vinifera
VIT_08s0007g07810
I
VIT_13s0064g01290
Vitis vinifera
VIT_13s0064g01290
I
VIT_18s0041g00690
Vitis vinifera
VIT_18s0041g00690
I
GRMZM2G085467
Zea mays
GRMZM2G085467
I
GRMZM2G417597
Zea mays
GRMZM2G417597
I
GRMZM2G437481
Zea mays
GRMZM2G437481
I