CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSP00000056233-D1
(
Bos grunniens
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00170 (bZIP_1)
IPR011616
ENSP00000056233-D1
T070139_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NFE2L3
M09923_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NRF3_02
0.926
0.937
Nfe2l3
M10031_2.00
Mus musculus
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NRF3_01
0.893
0.857
NFE2L1
M04008_2.00
Homo sapiens
RTGACTCAY
RTGAGTCAY
SELEX
Rodriguez-Martinez et al.(2017)
NFE2L1.1
0.852
0.651
NFE2L1
M08782_2.00
Homo sapiens
NATGAYD
HRTCATN
Misc
Kulakovskiy et al.(2013)
NF2L1_HUMAN.H11MO.0.C
0.852
0.651
Nfe2l1
M08831_2.00
Mus musculus
NATGAYD
HRTCATN
Misc
Kulakovskiy et al.(2013)
NF2L1_MOUSE.H11MO.0.C
0.852
0.651
NFE2L1
M09925_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NFE2L1_Q5
0.852
0.651
NFE2L1
M09926_2.00
Homo sapiens
NNNNHWNNATGAC
GTCATNNWDNNNN
Transfac
Matys et al.(2006)
V$TCF11_01
0.852
0.651
Nfe2l2
M08077_2.00
Mus musculus
NRNNRTGACTCAGCA
TGCTGAGTCAYNNYN
ChIP-seq
Mathelier et al.(2014)
MA0150.2
0.834
0.540
Nfe2l2
M08816_2.00
Mus musculus
RTGACTNAGCANDH
DHNTGCTNAGTCAY
Misc
Kulakovskiy et al.(2013)
NF2L2_MOUSE.H11MO.0.A
0.834
0.540
NFE2L2
M08789_2.00
Homo sapiens
RTGACTCAGCANWW
WWNTGCTGAGTCAY
Misc
Kulakovskiy et al.(2013)
NF2L2_HUMAN.H11MO.0.A
0.833
0.556
NFE2L2
M09943_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NRF2_Q3
0.833
0.556
NFE2L2
M09944_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NRF2_Q4_01
0.833
0.556
NFE2L2
M09945_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NRF2_Q4
0.833
0.556
NFE2L2
M09946_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NRF2_Q6
0.833
0.556
NFE2L2
M01142_2.00
Gallus gallus
NNRTKAYNN
NNRTMAYNN
PBM
Lambert et al.(2019)
pTH9845
0.833
0.556
Nfe2
M08843_2.00
Mus musculus
RTGACTCAGCANDW
WHNTGCTGAGTCAY
Misc
Kulakovskiy et al.(2013)
NFE2_MOUSE.H11MO.0.A
0.821
0.508
NFE2
M02832_2.00
Homo sapiens
VATGACTCATB
VATGAGTCATB
SELEX
Jolma et al.(2013)
NFE2_1
0.818
0.508
NFE2
M04266_2.00
Homo sapiens
VRTGASTCAYB
VRTGASTCAYB
SELEX
Yin et al.(2017)
NFE2_eDBD_HT-SELEX
0.818
0.508
NFE2
M04024_2.00
Homo sapiens
RTGACTCAY
RTGAGTCAY
SELEX
Rodriguez-Martinez et al.(2017)
NFE2.1
0.818
0.508
NFE2
M07813_2.00
Homo sapiens
VRTGACTCAGCANWWHB
VDWWNTGCTGAGTCAYB
ChIP-seq
Gerstein et al.(2012)
K562_NFE2_Stanford
0.818
0.508
NFE2
M08793_2.00
Homo sapiens
VVRTGACTCAGCA
TGCTGAGTCAYBB
Misc
Kulakovskiy et al.(2013)
NFE2_HUMAN.H11MO.0.A
0.818
0.508
NFE2
M09486_2.00
Homo sapiens
VATGACTCAGCA
TGCTGAGTCATB
Misc
Heinz et al.(2010)
K562-NFE2_GSE31477
0.818
0.508
NFE2
M09959_2.00
Homo sapiens
RTGASTCAGCD
HGCTGASTCAY
Transfac
Matys et al.(2006)
V$NFE2_01
0.818
0.508
NFE2
M09960_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NFE2_04
0.818
0.508
NFE2
M09961_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NFE2_Q6
0.818
0.508
NFE2
M04267_2.00
Homo sapiens
NRTGASTCAYN
NRTGASTCAYN
SELEX
Yin et al.(2017)
NFE2_eDBD_Methyl-HT-SELEX
0.818
0.508
FBgn0262975
M03654_2.00
Drosophila melanogaster
NYGTCAYSRTGACRN
NYGTCAYSRTGACRN
SELEX
Nitta et al.(2015)
cnc_1
0.815
0.540
FBgn0262975
M03655_2.00
Drosophila melanogaster
SATGACRNVVATGACD
HGTCATBBNYGTCATS
SELEX
Nitta et al.(2015)
cnc_2
0.815
0.540
FBgn0262975
M03656_2.00
Drosophila melanogaster
GTCAKSATGACGTCAY
RTGACGTCATSMTGAC
SELEX
Nitta et al.(2015)
cnc_3
0.815
0.540
FBgn0262975
M08189_2.00
Drosophila melanogaster
TGAYTBDGCA
TGCHVARTCA
ChIP-seq
Contrino et al.(2012)
Mf3
0.815
0.540
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSP00000056233-D1
bZIP
577
639
SLIRDIRRRGKNKVAAQNCRKRKLDVILNLEDDVCSLQAKKETLKREQSQCHKAINIMKQKLH
Links
Other
bZIP
family TFs
Other
Bos grunniens
TFs
319 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
F775_14336
Aegilops tauschii
F775_14336
N
AMTR_s00077p00190160
Amborella trichopoda
AMTR_s00077p00190160
N
Aquca_004_00566
Aquilegia coerulea
Aquca_004_00566
N
SCR
Arabidopsis lyrata
fgenesh2_kg.5__1811__AT3G54220.1
N
SCR
Arabidopsis thaliana
AT3G54220
N
Bostr.0697s0034
Boechera stricta
Bostr.0697s0034
N
BRADI4G44090
Brachypodium distachyon
BRADI4G44090
N
Bo8g083500
Brassica oleracea
Bo8g083500
N
Bra007056
Brassica rapa
Bra007056
N
PK22310.1
Cannabis sativa
PK22310.1
N
PK17372.1
Cannabis sativa
PK17372.1
N
Cagra.0562s0013
Capsella grandiflora
Cagra.0562s0013
N
Carubv10016802m.g
Capsella rubella
Carubv10016802m.g
N
evm.TU.supercontig_1018.1
Carica papaya
evm.TU.supercontig_1018.1
N
Ca_09530
Cicer arietinum
Ca_09530
N
Cla012346
Citrullus lanatus
Cla012346
N
Ciclev10011085m.g
Citrus clementina
Ciclev10011085m.g
N
orange1.1g014896m.g
Citrus sinensis
orange1.1g014896m.g
N
Cucsa.002880
Cucumis sativus
Cucsa.002880
N
Eucgr.K01320
Eucalyptus grandis
Eucgr.K01320
N
Thhalv10010179m.g
Eutrema salsugineum
Thhalv10010179m.g
N
gene13644-v1.0-hybrid
Fragaria vesca
gene13644-v1.0-hybrid
N
GLYMA09G40620
Glycine max
GLYMA09G40620
N
GLYMA18G45220
Glycine max
GLYMA18G45220
N
Gorai.006G236200
Gossypium raimondii
Gorai.006G236200
N
Gorai.005G001300
Gossypium raimondii
Gorai.005G001300
N
MLOC_64716
Hordeum vulgare
MLOC_64716
N
LPERR11G01220
Leersia perrieri
LPERR11G01220
N
LPERR12G01340
Leersia perrieri
LPERR12G01340
N
LPERR11G01210
Leersia perrieri
LPERR11G01210
N
Lus10040734.g
Linum usitatissimum
Lus10040734.g
N
Lus10016496.g
Linum usitatissimum
Lus10016496.g
N
chr1.CM1255.400.nc
Lotus japonicus
chr1.CM1255.400.nc
N
MDP0000397638
Malus domestica
MDP0000397638
N
cassava36326.valid.m1
Manihot esculenta
cassava36326.valid.m1
N
cassava25218.valid.m1
Manihot esculenta
cassava25218.valid.m1
N
MTR_7g074650
Medicago truncatula
MTR_7g074650
N
mgf012242m
Mimulus guttatus
mgf012242m
N
GSMUA_Achr11G20070_001
Musa acuminata
GSMUA_Achr11G20070_001
N
GSMUA_Achr5G21440_001
Musa acuminata
GSMUA_Achr5G21440_001
N
OBART11G01460
Oryza barthii
OBART11G01460
N
OBART12G01190
Oryza barthii
OBART12G01190
N
OB07G24850
Oryza brachyantha
OB07G24850
N
ORGLA11G0013300
Oryza glaberrima
ORGLA11G0013300
N
ORGLA12G0010300
Oryza glaberrima
ORGLA12G0010300
N
OGLUM11G01180
Oryza glumaepatula
OGLUM11G01180
N
OGLUM12G01020
Oryza glumaepatula
OGLUM12G01020
N
BGIOSGA034703
Oryza indica
BGIOSGA034703
N
BGIOSGA036912
Oryza indica
BGIOSGA036912
N
OLONG_010321
Oryza longistaminata
OLONG_010321
N
ONIVA11G01600
Oryza nivara
ONIVA11G01600
N
OPUNC11G01240
Oryza punctata
OPUNC11G01240
N
ORUFI12G01460
Oryza rufipogon
ORUFI12G01460
N
ORUFI11G01380
Oryza rufipogon
ORUFI11G01380
N
OS07G0567700
Oryza sativa
OS07G0567700
N
SCR1
Oryza sativa
OS11G0124300
N
SCR2
Oryza sativa
OS12G0122000
N
Pavir.J19041
Panicum virgatum
Pavir.J19041
N
Pavir.J08573
Panicum virgatum
Pavir.J08573
N
Pavir.Ha01915
Panicum virgatum
Pavir.Ha01915
N
Pavir.J23622
Panicum virgatum
Pavir.J23622
N
Pavir.J21588
Panicum virgatum
Pavir.J21588
N
POPTR_0006s11500
Populus trichocarpa
POPTR_0006s11500
N
POPTR_0016s15060
Populus trichocarpa
POPTR_0016s15060
N
Pm002956
Prunus mume
Pm002956
N
PRUPE_ppa001546mg
Prunus persica
PRUPE_ppa001546mg
N
30073.m002204
Ricinus communis
30073.m002204
N
SapurV1A.0208s0090
Salix purpurea
SapurV1A.0208s0090
N
SapurV1A.1165s0100
Salix purpurea
SapurV1A.1165s0100
N
SELMODRAFT_432115
Selaginella moellendorffii
SELMODRAFT_432115
N
Solyc10g074680.1
Solanum lycopersicum
Solyc10g074680.1
N
PGSC0003DMG400016833
Solanum tuberosum
PGSC0003DMG400016833
N
Sb05g001500
Sorghum bicolor
Sb05g001500
N
TCM_017746
Theobroma cacao
TCM_017746
N
Traes_4DS_2CE9E3235
Triticum aestivum
Traes_4DS_2CE9E3235
N
Traes_2AS_455BD2CA1
Triticum aestivum
Traes_2AS_455BD2CA1
N
Traes_5DL_3EC609F62
Triticum aestivum
Traes_5DL_3EC609F62
N
Traes_4BS_A05D3DC53
Triticum aestivum
Traes_4BS_A05D3DC53
N
Traes_5BL_C02570726
Triticum aestivum
Traes_5BL_C02570726
N
TRIUR3_28106
Triticum urartu
TRIUR3_28106
N
SCR
Vitis vinifera
VIT_08s0056g00050
N
GRMZM2G131516
Zea mays
GRMZM2G131516
N
GRMZM2G015080
Zea mays
GRMZM2G015080
N