Ca_00041 (Cicer arietinum)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Ca_00041 T133675_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Ca_00041 C2H2 ZF 77 101
Ca_00041 C2H2 ZF 106 130
Ca_00041 C2H2 ZF 136 160
Ca_00041 C2H2 ZF 166 191
Ca_00041 C2H2 ZF 230 255

Links

Other C2H2 ZF family TFs
Other Cicer arietinum TFs

27 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
fgenesh2_kg.6__2821__AT4G06634.1 Arabidopsis lyrata fgenesh2_kg.6__2821__AT4G06634.1 I 0.759
Bostr.3877s0062 Boechera stricta Bostr.3877s0062 I 0.759
Bo3g023850 Brassica oleracea Bo3g023850 I 0.758
Bo00829s040 Brassica oleracea Bo00829s040 I 0.759
Bra029186 Brassica rapa Bra029186 I 0.758
Bra035726 Brassica rapa Bra035726 I 0.759
PK13777.1 Cannabis sativa PK13777.1 N 0.809
evm.TU.supercontig_161.1 Carica papaya evm.TU.supercontig_161.1 N 0.811
Cucsa.076000 Cucumis sativus Cucsa.076000 N 0.814
Eucgr.G00356 Eucalyptus grandis Eucgr.G00356 N 0.821
Thhalv10028723m.g Eutrema salsugineum Thhalv10028723m.g I 0.761
GLYMA05G30150 Glycine max GLYMA05G30150 N 0.819
GLYMA08G13310 Glycine max GLYMA08G13310 N 0.819
Gorai.002G214700 Gossypium raimondii Gorai.002G214700 N 0.814
LjT40J14.40.nc Lotus japonicus LjT40J14.40.nc N 0.818
cassava13878.valid.m1 Manihot esculenta cassava13878.valid.m1 N 0.801
mgf016294m Mimulus guttatus mgf016294m N 0.778
POPTR_0022s00900 Populus trichocarpa POPTR_0022s00900 N 0.811
POPTR_0004s23050 Populus trichocarpa POPTR_0004s23050 N 0.798
Pm003925 Prunus mume Pm003925 N 0.808
PRUPE_ppa007287mg Prunus persica PRUPE_ppa007287mg N 0.808
30093.m000368 Ricinus communis 30093.m000368 N 0.809
SapurV1A.0136s0510 Salix purpurea SapurV1A.0136s0510 N 0.811
SapurV1A.0470s0060 Salix purpurea SapurV1A.0470s0060 N 0.802
SapurV1A.0618s0010 Salix purpurea SapurV1A.0618s0010 N 0.802
TCM_006252 Theobroma cacao TCM_006252 N 0.804
VIT_12s0035g00660 Vitis vinifera VIT_12s0035g00660 N 0.810