Gfo_R016211 (Geospiza fortis)
C2HC ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01530 (zf-C2HC) IPR002515 Gfo_R016211 T159454_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Gfo_R016211 C2HC ZF 558 587

Links

Other C2HC ZF family TFs
Other Geospiza fortis TFs

55 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aquca_009_00954 Aquilegia coerulea Aquca_009_00954 N
fgenesh1_pg.C_scaffold_4001848 Arabidopsis lyrata fgenesh1_pg.C_scaffold_4001848 N
fgenesh1_pg.C_scaffold_4001851 Arabidopsis lyrata fgenesh1_pg.C_scaffold_4001851 N
SCL9 Arabidopsis thaliana AT2G37650 N
Bostr.23794s0312 Boechera stricta Bostr.23794s0312 N
Bo3g031890 Brassica oleracea Bo3g031890 N
Bra000012 Brassica rapa Bra000012 N
PK20526.1 Cannabis sativa PK20526.1 N
Cagra.18121s0006 Capsella grandiflora Cagra.18121s0006 N
Carubv10025657m.g Capsella rubella Carubv10025657m.g N
Ca_21138 Cicer arietinum Ca_21138 N
Cla018179 Citrullus lanatus Cla018179 N
Ciclev10030787m.g Citrus clementina Ciclev10030787m.g N
Ciclev10011141m.g Citrus clementina Ciclev10011141m.g N
orange1.1g004514m.g Citrus sinensis orange1.1g004514m.g N
orange1.1g004488m.g Citrus sinensis orange1.1g004488m.g N
Cucsa.175500 Cucumis sativus Cucsa.175500 N
Eucgr.A01279 Eucalyptus grandis Eucgr.A01279 N
Eucgr.G02939 Eucalyptus grandis Eucgr.G02939 N
Eucgr.G02941 Eucalyptus grandis Eucgr.G02941 N
Thhalv10016318m.g Eutrema salsugineum Thhalv10016318m.g N
gene18433-v1.0-hybrid Fragaria vesca gene18433-v1.0-hybrid N
GLYMA18G39920 Glycine max GLYMA18G39920 N
GLYMA03G10320 Glycine max GLYMA03G10320 N
GLYMA07G15950 Glycine max GLYMA07G15950 N
Gorai.007G376400 Gossypium raimondii Gorai.007G376400 N
Gorai.010G201000 Gossypium raimondii Gorai.010G201000 N
Gorai.011G266200 Gossypium raimondii Gorai.011G266200 N
Lus10024384.g Linum usitatissimum Lus10024384.g N
MDP0000119093 Malus domestica MDP0000119093 N
cassava15723.m1 Manihot esculenta cassava15723.m1 N
cassava2361.valid.m1 Manihot esculenta cassava2361.valid.m1 N
cassava31335.valid.m1 Manihot esculenta cassava31335.valid.m1 N
MTR_7g062120 Medicago truncatula MTR_7g062120 N
mgf011165m Mimulus guttatus mgf011165m N
mgf014897m Mimulus guttatus mgf014897m N
Pavir.Ia03770 Panicum virgatum Pavir.Ia03770 N
Pavir.J32327 Panicum virgatum Pavir.J32327 N
PDK_20s1329542g002 Phoenix dactylifera PDK_20s1329542g002 N
POPTR_0006s08690 Populus trichocarpa POPTR_0006s08690 N
POPTR_0008s05750 Populus trichocarpa POPTR_0008s05750 N
Pm002685 Prunus mume Pm002685 N
Pm000719 Prunus mume Pm000719 N
PRUPE_ppa001883mg Prunus persica PRUPE_ppa001883mg N
PRUPE_ppa003149mg Prunus persica PRUPE_ppa003149mg N
27568.m000253 Ricinus communis 27568.m000253 N
29767.m000200 Ricinus communis 29767.m000200 N
SapurV1A.0451s0060 Salix purpurea SapurV1A.0451s0060 N
SapurV1A.0001s1700 Salix purpurea SapurV1A.0001s1700 N
Si034417m.g Setaria italica Si034417m.g N
Solyc09g010920.1 Solanum lycopersicum Solyc09g010920.1 N
Solyc10g086530.1 Solanum lycopersicum Solyc10g086530.1 N
PGSC0003DMG400019200 Solanum tuberosum PGSC0003DMG400019200 N
PGSC0003DMG400008904 Solanum tuberosum PGSC0003DMG400008904 N
Sb01g039670 Sorghum bicolor Sb01g039670 N
TCM_021920 Theobroma cacao TCM_021920 N
TCM_042705 Theobroma cacao TCM_042705 N
Traes_4DS_050789E2A Triticum aestivum Traes_4DS_050789E2A N
VIT_06s0004g04960 Vitis vinifera VIT_06s0004g04960 N
VIT_08s0007g00510 Vitis vinifera VIT_08s0007g00510 N
VIT_13s0019g01700 Vitis vinifera VIT_13s0019g01700 N
GRMZM2G049159 Zea mays GRMZM2G049159 N