GATA16 (Arabidopsis thaliana)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00320 (GATA) IPR000679 AT5G49300 T191731_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GATA16
M06897_2.00		 Arabidopsis thaliana
ATGATGATGATSATGATGATGATSATG
CATSATCATCATCATSATCATCATCAT		 Dap-seq
OMalley et al.(2016)
GATA16_col_a		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GATA15
M01997_2.00 		Arabidopsis thaliana
NNHGATCNN
NNGATCDNN		 PBM
Weirauch et al.(2014)
pTH7662 		0.825 0.917
GATA15
M06886_2.00 		Arabidopsis thaliana
GATGATGATGATGATGATS
SATCATCATCATCATCATC		 Dap-seq
OMalley et al.(2016)
GATA15_col_b 		0.825 0.917
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AT5G49300.1 GATA 38 73

Links

Other GATA family TFs
Other Arabidopsis thaliana TFs

136 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00133p00020030 Amborella trichopoda AMTR_s00133p00020030 N
Aquca_002_00510 Aquilegia coerulea Aquca_002_00510 N
ATWHY3 Arabidopsis lyrata fgenesh2_kg.5__172__AT2G02740.1 N
ATWHY1 Arabidopsis lyrata fgenesh2_kg.1__1569__AT1G14410.1 N
WHY1 Arabidopsis thaliana AT1G14410 N
WHY3 Arabidopsis thaliana AT2G02740 N
Bostr.0556s0088 Boechera stricta Bostr.0556s0088 N
BRADI1G51040 Brachypodium distachyon BRADI1G51040 N
Bo8g066030 Brassica oleracea Bo8g066030 N
Bo7g080560 Brassica oleracea Bo7g080560 N
Bra024809 Brassica rapa Bra024809 N
Bra016702 Brassica rapa Bra016702 N
PK22670.1 Cannabis sativa PK22670.1 N
Cagra.3501s0060 Capsella grandiflora Cagra.3501s0060 N
Cagra.0534s0030 Capsella grandiflora Cagra.0534s0030 N
Carubv10017841m.g Capsella rubella Carubv10017841m.g N
Carubv10010024m.g Capsella rubella Carubv10010024m.g N
evm.TU.supercontig_1007.4 Carica papaya evm.TU.supercontig_1007.4 N
Ca_24297 Cicer arietinum Ca_24297 N
Cla022217 Citrullus lanatus Cla022217 N
Ciclev10032427m.g Citrus clementina Ciclev10032427m.g N
orange1.1g024467m.g Citrus sinensis orange1.1g024467m.g N
Cucsa.005520 Cucumis sativus Cucsa.005520 N
Eucgr.G02539 Eucalyptus grandis Eucgr.G02539 N
Thhalv10004763m.g Eutrema salsugineum Thhalv10004763m.g N
GLYMA08G40850 Glycine max GLYMA08G40850 N
GLYMA18G16200 Glycine max GLYMA18G16200 N
Gorai.013G077400 Gossypium raimondii Gorai.013G077400 N
MLOC_11586 Hordeum vulgare MLOC_11586 N
LPERR06G02670 Leersia perrieri LPERR06G02670 N
Lus10036723.g Linum usitatissimum Lus10036723.g N
LjSGA_035916.1.1 Lotus japonicus LjSGA_035916.1.1 N
LjSGA_053590.1 Lotus japonicus LjSGA_053590.1 N
MDP0000268451 Malus domestica MDP0000268451 N
cassava35817.valid.m1 Manihot esculenta cassava35817.valid.m1 N
MTR_5g038560 Medicago truncatula MTR_5g038560 N
mgf002465m Mimulus guttatus mgf002465m N
GSMUA_Achr10G21100_001 Musa acuminata GSMUA_Achr10G21100_001 N
OBART06G03050 Oryza barthii OBART06G03050 N
ORGLA06G0029900 Oryza glaberrima ORGLA06G0029900 N
BGIOSGA022297 Oryza indica BGIOSGA022297 N
OMERI07G11550 Oryza meridionalis OMERI07G11550 N
OMERI06G03280 Oryza meridionalis OMERI06G03280 N
ONIVA06G03980 Oryza nivara ONIVA06G03980 N
OPUNC06G02750 Oryza punctata OPUNC06G02750 N
ORUFI06G03010 Oryza rufipogon ORUFI06G03010 N
OS06G0145800 Oryza sativa OS06G0145800 N
Pavir.Da02402 Panicum virgatum Pavir.Da02402 N
Pavir.Db02235 Panicum virgatum Pavir.Db02235 N
PDK_20s1701491g001 Phoenix dactylifera PDK_20s1701491g001 N
POPTR_0010s10260 Populus trichocarpa POPTR_0010s10260 N
POPTR_0008s14840 Populus trichocarpa POPTR_0008s14840 N
Pm006558 Prunus mume Pm006558 N
PRUPE_ppa009776mg Prunus persica PRUPE_ppa009776mg N
29736.m002027 Ricinus communis 29736.m002027 N
SapurV1A.0609s0180 Salix purpurea SapurV1A.0609s0180 N
Si006951m.g Setaria italica Si006951m.g N
Solyc05g007100.2 Solanum lycopersicum Solyc05g007100.2 N
PGSC0003DMG400017627 Solanum tuberosum PGSC0003DMG400017627 N
Sb10g003170 Sorghum bicolor Sb10g003170 N
TCM_011795 Theobroma cacao TCM_011795 N
Traes_7DS_B1FD1C84F Triticum aestivum Traes_7DS_B1FD1C84F N
Traes_7AS_45F0BB787 Triticum aestivum Traes_7AS_45F0BB787 N
Traes_4AL_FE94301FD Triticum aestivum Traes_4AL_FE94301FD N
GRMZM2G155662 Zea mays GRMZM2G155662 N