Pavir.J21588 (Panicum virgatum)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03514 (GRAS) IPR005202 Pavir.J21588 T203068_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J21588.1.p GRAS 1 154

Links

Other GRAS family TFs
Other Panicum virgatum TFs

53 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00077p00190160 Amborella trichopoda AMTR_s00077p00190160 N 0.773
Aquca_004_00566 Aquilegia coerulea Aquca_004_00566 N 0.779
SCR Arabidopsis lyrata fgenesh2_kg.5__1811__AT3G54220.1 N 0.779
SCR Arabidopsis thaliana AT3G54220 N 0.779
Bostr.0697s0034 Boechera stricta Bostr.0697s0034 N 0.779
BRADI4G44090 Brachypodium distachyon BRADI4G44090 N 0.896
Bo8g083500 Brassica oleracea Bo8g083500 N 0.786
Bra007056 Brassica rapa Bra007056 N 0.786
PK22310.1 Cannabis sativa PK22310.1 N 0.792
Cagra.0562s0013 Capsella grandiflora Cagra.0562s0013 N 0.779
Carubv10016802m.g Capsella rubella Carubv10016802m.g N 0.779
evm.TU.supercontig_1018.1 Carica papaya evm.TU.supercontig_1018.1 N 0.799
Ca_09530 Cicer arietinum Ca_09530 N 0.792
Cla012346 Citrullus lanatus Cla012346 N 0.792
Cucsa.002880 Cucumis sativus Cucsa.002880 N 0.792
Eucgr.K01320 Eucalyptus grandis Eucgr.K01320 N 0.799
Thhalv10010179m.g Eutrema salsugineum Thhalv10010179m.g N 0.786
gene13644-v1.0-hybrid Fragaria vesca gene13644-v1.0-hybrid N 0.812
GLYMA18G45220 Glycine max GLYMA18G45220 N 0.805
GLYMA09G40620 Glycine max GLYMA09G40620 N 0.805
Gorai.005G001300 Gossypium raimondii Gorai.005G001300 N 0.721
MLOC_79758 Hordeum vulgare MLOC_79758 N 0.896
MLOC_64716 Hordeum vulgare MLOC_64716 N 0.844
LPERR11G01220 Leersia perrieri LPERR11G01220 N 0.969
Lus10040734.g Linum usitatissimum Lus10040734.g N 0.708
chr1.CM1255.400.nc Lotus japonicus chr1.CM1255.400.nc N 0.805
MDP0000397638 Malus domestica MDP0000397638 N 0.805
MTR_7g074650 Medicago truncatula MTR_7g074650 N 0.799
mgf012242m Mimulus guttatus mgf012242m N 0.773
GSMUA_Achr8G09400_001 Musa acuminata GSMUA_Achr8G09400_001 N 0.857
OB11G11140 Oryza brachyantha OB11G11140 N 0.818
OB12G11340 Oryza brachyantha OB12G11340 N 0.818
OGLUM12G01020 Oryza glumaepatula OGLUM12G01020 N 0.916
BGIOSGA036912 Oryza indica BGIOSGA036912 N 0.916
OLONG_010321 Oryza longistaminata OLONG_010321 N 0.916
ONIVA11G01600 Oryza nivara ONIVA11G01600 N 0.916
OPUNC11G01240 Oryza punctata OPUNC11G01240 N 0.916
ORUFI11G01380 Oryza rufipogon ORUFI11G01380 N 0.916
ORUFI12G01460 Oryza rufipogon ORUFI12G01460 N 0.916
SCR2 Oryza sativa OS12G0122000 N 0.916
Pavir.J19041 Panicum virgatum Pavir.J19041 N 0.903
POPTR_0016s15060 Populus trichocarpa POPTR_0016s15060 N 0.812
Pm002956 Prunus mume Pm002956 N 0.805
PRUPE_ppa001546mg Prunus persica PRUPE_ppa001546mg N 0.812
30073.m002204 Ricinus communis 30073.m002204 N 0.812
SapurV1A.0208s0090 Salix purpurea SapurV1A.0208s0090 N 0.799
Solyc10g074680.1 Solanum lycopersicum Solyc10g074680.1 N 0.799
Sb05g001500 Sorghum bicolor Sb05g001500 N 0.942
Traes_5DL_3EC609F62 Triticum aestivum Traes_5DL_3EC609F62 N 0.838
Traes_5BL_C02570726 Triticum aestivum Traes_5BL_C02570726 N 0.864
Traes_4DS_2CE9E3235 Triticum aestivum Traes_4DS_2CE9E3235 N 0.896
Traes_4BS_A05D3DC53 Triticum aestivum Traes_4BS_A05D3DC53 N 0.896
GRMZM2G131516 Zea mays GRMZM2G131516 N 0.992