PGUG_00395 (Candida guilliermondii)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 PGUG_00395 T252708_2.00 Broad (2016-May-1)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
srfA
M02283_2.00 		Dictyostelium discoideum
MYDWWWNNRD
HYNNWWWHRK		 PBM
Weirauch et al.(2014)
pTH5539 		0.917 0.917
MCM1
M01558_2.00 		Saccharomyces cerevisiae
YNNWWNNRGN
NCYNNWWNNR		 PBM
Zhu et al.(2009)
Mcm1 		0.875 0.875
MCM1
M08589_2.00 		Saccharomyces cerevisiae
HNHTWCCBDWWHVGGAHDHN
NDHDTCCBDWWHVGGWADND		 Misc
DeBoer et al.(2011)
YMR043W_831 		0.875 0.875
MCM1
M10990_2.00 		Saccharomyces cerevisiae
WNDCCYAAWNNGGWMW
WKWCCNNWTTRGGHNW		 Transfac
Matys et al.(2006)
F$MCM1_01 		0.875 0.875
MCM1
M10991_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$MCM1_02 		0.875 0.875
MCM1
M10992_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$MCM1_Q6 		0.875 0.875
MCM1
M08458_2.00 		Saccharomyces cerevisiae
TTCCYRAWNNGG
CCNNWTYRGGAA		 COMPILED
Mathelier et al.(2014)
MA0331.1 		0.875 0.875
Srf
M00178_2.00 		Mus musculus
NNDDWWHHNN
NNDDWWHHNN		 PBM
Badis et al.(2009)
Srf_3509 		0.812 0.812
SRF
M03341_2.00 		Homo sapiens
DCCWTATATGGT
ACCATATAWGGH		 SELEX
Jolma et al.(2013)
SRF_1 		0.812 0.812
SRF
M03342_2.00 		Homo sapiens
TKHCCWTATATGGKMA
TKMCCATATAWGGDMA		 SELEX
Jolma et al.(2013)
SRF_2 		0.812 0.812
SRF
M05553_2.00 		Homo sapiens
CCNTANAWGG
CCWTNTANGG		 SELEX
Yin et al.(2017)
SRF_eDBD_HT-SELEX 		0.812 0.812
SRF
M07981_2.00 		Homo sapiens
NNNWDNCCAWAWAWGGNVD
HBNCCWTWTWTGGNHWNNN		 ChIP-seq
Gerstein et al.(2012)
GM12878_SRF_HudsonAlpha 		0.812 0.812
SRF
M07982_2.00 		Homo sapiens
CCAWATAAGGNMAD
HTKNCCTTATWTGG		 ChIP-seq
Gerstein et al.(2012)
H1-hESC_SRF_HudsonAlpha 		0.812 0.812
SRF
M07983_2.00 		Homo sapiens
NNWNNCCAWAWAWGGNVD
HBNCCWTWTWTGGNNWNN		 ChIP-seq
Gerstein et al.(2012)
HepG2_SRF_HudsonAlpha 		0.812 0.812
SRF
M07984_2.00 		Homo sapiens
GNCCAWATADGGHMANN
NNTKDCCHTATWTGGNC		 ChIP-seq
Gerstein et al.(2012)
K562_SRF_HudsonAlpha 		0.812 0.812
SRF
M09249_2.00 		Homo sapiens
HNWBVCCAWAWAWGGNRR
YYNCCWTWTWTGGBVWND		 Misc
Kulakovskiy et al.(2013)
SRF_HUMAN.H11MO.0.A 		0.812 0.812
Srf
M09254_2.00 		Mus musculus
NWDVCCAWAWAWGGVMR
YKBCCWTWTWTGGBHWN		 Misc
Kulakovskiy et al.(2013)
SRF_MOUSE.H11MO.0.A 		0.812 0.812
Srf
M09598_2.00 		Mus musculus
CCWWATWWGGNH
DNCCWWATWWGG		 Misc
Heinz et al.(2010)
PUER-Srf_Sullivan_et_al. 		0.812 0.812
SRF
M10947_2.00 		Homo sapiens
MNBWCCWTATAWGGGCAT
ATGCCCWTATAWGGWVNK		 Transfac
Matys et al.(2006)
V$SRF_01 		0.812 0.812
SRF
M10948_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SRF_02 		0.812 0.812
SRF
M10949_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SRF_03 		0.812 0.812
SRF
M10950_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SRF_09 		0.812 0.812
SRF
M10951_2.00 		Homo sapiens
DCCWTATAWGGVSHB
VDSBCCWTATAWGGH		 Transfac
Matys et al.(2006)
V$SRF_C 		0.812 0.812
SRF
M10952_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SRF_Q3 		0.812 0.812
SRF
M10953_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SRF_Q4 		0.812 0.812
SRF
M10954_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SRF_Q5_01 		0.812 0.812
SRF
M10955_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SRF_Q5_02 		0.812 0.812
SRF
M10956_2.00 		Homo sapiens
BNCCAWATAWGGVN
NBCCWTATWTGGNV		 Transfac
Matys et al.(2006)
V$SRF_Q6 		0.812 0.812
SRF
M05554_2.00 		Homo sapiens
CCNTAYAWGG
CCWTRTANGG		 SELEX
Yin et al.(2017)
SRF_eDBD_Methyl-HT-SELEX 		0.812 0.812
bs
M03915_2.00 		Drosophila melanogaster
NCCWTATAWGGN
NCCWTATAWGGN		 SELEX
Nitta et al.(2015)
bs_1 		0.771 0.771
bs
M03916_2.00 		Drosophila melanogaster
NCCWTAHAWGGH
DCCWTDTAWGGN		 SELEX
Nitta et al.(2015)
bs_2 		0.771 0.771
unc-120
M00684_2.00 		Caenorhabditis elegans
CHWAWWDGG
CCHWWTWDG		 PBM
Narasimhan et al.(2015)
pTH10822 		0.729 0.729
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PGUT_00395 MADS box 55 102

Links

Other MADS box family TFs
Other Candida guilliermondii TFs

451 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_02052 Aegilops tauschii F775_02052 I
F775_22967 Aegilops tauschii F775_22967 I
Aquca_017_00693 Aquilegia coerulea Aquca_017_00693 I
Aquca_034_00400 Aquilegia coerulea Aquca_034_00400 I
fgenesh1_pg.C_scaffold_4002383 Arabidopsis lyrata fgenesh1_pg.C_scaffold_4002383 N
LBD29 Arabidopsis lyrata fgenesh2_kg.5__2263__AT3G58190.1 I
LBD14 Arabidopsis thaliana AT2G31310 N
LBD17 Arabidopsis thaliana AT2G42440 N
LBD29 Arabidopsis thaliana AT3G58190 I
Bostr.20903s0070 Boechera stricta Bostr.20903s0070 I
Bostr.24513s0089 Boechera stricta Bostr.24513s0089 N
Bostr.25993s0537 Boechera stricta Bostr.25993s0537 I
BRADI1G68170 Brachypodium distachyon BRADI1G68170 I
BRADI1G75110 Brachypodium distachyon BRADI1G75110 I
BRADI1G75120 Brachypodium distachyon BRADI1G75120 N
BRADI3G12550 Brachypodium distachyon BRADI3G12550 I
Bo3g036000 Brassica oleracea Bo3g036000 I
Bo3g036030 Brassica oleracea Bo3g036030 I
Bo4g052270 Brassica oleracea Bo4g052270 N
Bo4g108600 Brassica oleracea Bo4g108600 I
Bo4g191540 Brassica oleracea Bo4g191540 N
Bo8g092560 Brassica oleracea Bo8g092560 I
Bra000257 Brassica rapa Bra000257 I
Bra007385 Brassica rapa Bra007385 N
Bra014581 Brassica rapa Bra014581 I
Bra021737 Brassica rapa Bra021737 N
PK23380.1 Cannabis sativa PK23380.1 I
Cagra.0686s0036 Capsella grandiflora Cagra.0686s0036 I
Cagra.6952s0010 Capsella grandiflora Cagra.6952s0010 N
Carubv10019250m.g Capsella rubella Carubv10019250m.g I
Carubv10025067m.g Capsella rubella Carubv10025067m.g N
evm.TU.supercontig_18.118 Carica papaya evm.TU.supercontig_18.118 I
evm.TU.supercontig_50.42 Carica papaya evm.TU.supercontig_50.42 I
Ca_07763 Cicer arietinum Ca_07763 I
Ca_12214 Cicer arietinum Ca_12214 I
Cla006087 Citrullus lanatus Cla006087 I
Cla015094 Citrullus lanatus Cla015094 I
Ciclev10021992m.g Citrus clementina Ciclev10021992m.g I
Ciclev10023341m.g Citrus clementina Ciclev10023341m.g I
orange1.1g027399m.g Citrus sinensis orange1.1g027399m.g I
orange1.1g036534m.g Citrus sinensis orange1.1g036534m.g I
Cucsa.053450 Cucumis sativus Cucsa.053450 I
Cucsa.388160 Cucumis sativus Cucsa.388160 I
Eucgr.B01529 Eucalyptus grandis Eucgr.B01529 I
Eucgr.E01414 Eucalyptus grandis Eucgr.E01414 I
Thhalv10006226m.g Eutrema salsugineum Thhalv10006226m.g I
Thhalv10017299m.g Eutrema salsugineum Thhalv10017299m.g N
Thhalv10017903m.g Eutrema salsugineum Thhalv10017903m.g N
gene08253-v1.0-hybrid Fragaria vesca gene08253-v1.0-hybrid I
gene08254-v1.0-hybrid Fragaria vesca gene08254-v1.0-hybrid I
GLYMA03G31860 Glycine max GLYMA03G31860 I
GLYMA10G04050 Glycine max GLYMA10G04050 I
GLYMA13G18210 Glycine max GLYMA13G18210 I
GLYMA19G34600 Glycine max GLYMA19G34600 I
Gorai.001G251700 Gossypium raimondii Gorai.001G251700 I
Gorai.004G073200 Gossypium raimondii Gorai.004G073200 I
Gorai.004G073300 Gossypium raimondii Gorai.004G073300 I
Gorai.004G220000 Gossypium raimondii Gorai.004G220000 I
Gorai.007G144500 Gossypium raimondii Gorai.007G144500 I
Gorai.008G114400 Gossypium raimondii Gorai.008G114400 I
MLOC_10783 Hordeum vulgare MLOC_10783 N
MLOC_10784 Hordeum vulgare MLOC_10784 I
MLOC_52276 Hordeum vulgare MLOC_52276 I
MLOC_55239 Hordeum vulgare MLOC_55239 I
MLOC_61947 Hordeum vulgare MLOC_61947 I
LPERR02G31040 Leersia perrieri LPERR02G31040 I
LPERR03G03470 Leersia perrieri LPERR03G03470 I
LPERR03G09330 Leersia perrieri LPERR03G09330 I
LPERR08G20530 Leersia perrieri LPERR08G20530 I
Lus10000613.g Linum usitatissimum Lus10000613.g I
Lus10033873.g Linum usitatissimum Lus10033873.g I
LjSGA_002536.2 Lotus japonicus LjSGA_002536.2 I
LjT35F15.90.nd Lotus japonicus LjT35F15.90.nd I
MDP0000145761 Malus domestica MDP0000145761 I
cassava36912.valid.m1 Manihot esculenta cassava36912.valid.m1 I
cassava40664.m1 Manihot esculenta cassava40664.m1 I
cassava41632.m1 Manihot esculenta cassava41632.m1 I
MTR_1g070205 Medicago truncatula MTR_1g070205 I
MTR_7g096610 Medicago truncatula MTR_7g096610 I
MTR_8g036085 Medicago truncatula MTR_8g036085 I
mgf020773m Mimulus guttatus mgf020773m I
GSMUA_Achr10G06700_001 Musa acuminata GSMUA_Achr10G06700_001 I
GSMUA_Achr11G02110_001 Musa acuminata GSMUA_Achr11G02110_001 I
GSMUA_Achr1G01350_001 Musa acuminata GSMUA_Achr1G01350_001 I
GSMUA_Achr1G01360_001 Musa acuminata GSMUA_Achr1G01360_001 I
GSMUA_Achr1G02520_001 Musa acuminata GSMUA_Achr1G02520_001 I
GSMUA_Achr1G06580_001 Musa acuminata GSMUA_Achr1G06580_001 I
GSMUA_Achr2G11240_001 Musa acuminata GSMUA_Achr2G11240_001 I
GSMUA_Achr4G25190_001 Musa acuminata GSMUA_Achr4G25190_001 I
GSMUA_Achr5G11330_001 Musa acuminata GSMUA_Achr5G11330_001 I
GSMUA_Achr8G14330_001 Musa acuminata GSMUA_Achr8G14330_001 I
GSMUA_AchrUn_randomG07730_001 Musa acuminata GSMUA_AchrUn_randomG07730_001 I
GSMUA_AchrUn_randomG10470_001 Musa acuminata GSMUA_AchrUn_randomG10470_001 I
GSMUA_AchrUn_randomG23710_001 Musa acuminata GSMUA_AchrUn_randomG23710_001 I
OBART02G37570 Oryza barthii OBART02G37570 I
OBART03G03830 Oryza barthii OBART03G03830 I
OBART03G10450 Oryza barthii OBART03G10450 I
OBART08G23860 Oryza barthii OBART08G23860 I
OB02G44330 Oryza brachyantha OB02G44330 I
OB03G13890 Oryza brachyantha OB03G13890 I
OB08G30680 Oryza brachyantha OB08G30680 I
ORGLA02G0327800 Oryza glaberrima ORGLA02G0327800 I
ORGLA03G0035900 Oryza glaberrima ORGLA03G0035900 I
ORGLA03G0100400 Oryza glaberrima ORGLA03G0100400 I
ORGLA08G0192400 Oryza glaberrima ORGLA08G0192400 I
OGLUM02G38740 Oryza glumaepatula OGLUM02G38740 I
OGLUM03G03710 Oryza glumaepatula OGLUM03G03710 I
OGLUM03G10340 Oryza glumaepatula OGLUM03G10340 I
OGLUM08G25340 Oryza glumaepatula OGLUM08G25340 I
BGIOSGA005344 Oryza indica BGIOSGA005344 I
BGIOSGA011118 Oryza indica BGIOSGA011118 I
BGIOSGA011445 Oryza indica BGIOSGA011445 I
BGIOSGA026473 Oryza indica BGIOSGA026473 I
OLONG_001985 Oryza longistaminata OLONG_001985 I
OLONG_010223 Oryza longistaminata OLONG_010223 I
OLONG_020841 Oryza longistaminata OLONG_020841 I
OMERI02G35350 Oryza meridionalis OMERI02G35350 I
OMERI03G09680 Oryza meridionalis OMERI03G09680 I
OMERI07G01660 Oryza meridionalis OMERI07G01660 I
OMERI08G18670 Oryza meridionalis OMERI08G18670 I
ONIVA02G40360 Oryza nivara ONIVA02G40360 I
ONIVA03G03580 Oryza nivara ONIVA03G03580 I
ONIVA09G01330 Oryza nivara ONIVA09G01330 I
OPUNC02G34750 Oryza punctata OPUNC02G34750 I
OPUNC03G03520 Oryza punctata OPUNC03G03520 I
OPUNC03G10080 Oryza punctata OPUNC03G10080 I
OPUNC08G21770 Oryza punctata OPUNC08G21770 I
ORUFI02G39110 Oryza rufipogon ORUFI02G39110 I
ORUFI03G03550 Oryza rufipogon ORUFI03G03550 I
ORUFI03G10670 Oryza rufipogon ORUFI03G10670 I
ORUFI08G26340 Oryza rufipogon ORUFI08G26340 I
OS02G0820500 Oryza sativa OS02G0820500 I
OS03G0149100 Oryza sativa OS03G0149100 I
OS03G0246900 Oryza sativa OS03G0246900 I
OS08G0563400 Oryza sativa OS08G0563400 I
Pavir.Aa00097 Panicum virgatum Pavir.Aa00097 I
Pavir.Fa00011 Panicum virgatum Pavir.Fa00011 I
Pavir.Ia04220 Panicum virgatum Pavir.Ia04220 I
Pavir.Ib00282 Panicum virgatum Pavir.Ib00282 I
Pavir.Ib00283 Panicum virgatum Pavir.Ib00283 I
Pavir.J03376 Panicum virgatum Pavir.J03376 I
Pavir.J24246 Panicum virgatum Pavir.J24246 I
Pavir.J34872 Panicum virgatum Pavir.J34872 I
Pavir.J39638 Panicum virgatum Pavir.J39638 I
POPTR_0002s04200 Populus trichocarpa POPTR_0002s04200 I
Pm020627 Prunus mume Pm020627 I
Pm020628 Prunus mume Pm020628 I
PRUPE_ppa019939mg Prunus persica PRUPE_ppa019939mg I
PRUPE_ppa025889mg Prunus persica PRUPE_ppa025889mg I
28428.m000040 Ricinus communis 28428.m000040 I
29883.m002035 Ricinus communis 29883.m002035 I
30174.m008898 Ricinus communis 30174.m008898 I
SapurV1A.0006s0970 Salix purpurea SapurV1A.0006s0970 I
SapurV1A.0006s0980 Salix purpurea SapurV1A.0006s0980 I
SapurV1A.0532s0190 Salix purpurea SapurV1A.0532s0190 I
Si015156m.g Setaria italica Si015156m.g I
Si019578m.g Setaria italica Si019578m.g I
Si037727m.g Setaria italica Si037727m.g I
Si040019m.g Setaria italica Si040019m.g I
Solyc09g066270.2 Solanum lycopersicum Solyc09g066270.2 I
PGSC0003DMG400009713 Solanum tuberosum PGSC0003DMG400009713 I
PGSC0003DMG400009716 Solanum tuberosum PGSC0003DMG400009716 I
Sb01g041130 Sorghum bicolor Sb01g041130 I
Sb01g046990 Sorghum bicolor Sb01g046990 I
Sb01g047000 Sorghum bicolor Sb01g047000 I
Sb04g037550 Sorghum bicolor Sb04g037550 I
Sb07g023810 Sorghum bicolor Sb07g023810 I
TCM_004103 Theobroma cacao TCM_004103 I
TCM_042730 Theobroma cacao TCM_042730 I
Traes_4AL_3BA1D51E2 Triticum aestivum Traes_4AL_3BA1D51E2 N
Traes_4AL_BB3F89030 Triticum aestivum Traes_4AL_BB3F89030 N
Traes_4AL_CAF4E16B5 Triticum aestivum Traes_4AL_CAF4E16B5 I
Traes_4AS_5971FF832 Triticum aestivum Traes_4AS_5971FF832 I
Traes_4BL_3FB579782 Triticum aestivum Traes_4BL_3FB579782 I
Traes_4BL_A4D0F4AD6 Triticum aestivum Traes_4BL_A4D0F4AD6 I
Traes_4BL_F71DE14F7 Triticum aestivum Traes_4BL_F71DE14F7 N
Traes_4BS_5D9291539 Triticum aestivum Traes_4BS_5D9291539 I
Traes_4BS_B43A99154 Triticum aestivum Traes_4BS_B43A99154 N
Traes_4DL_05F87867C Triticum aestivum Traes_4DL_05F87867C N
Traes_4DL_43D63ABE3 Triticum aestivum Traes_4DL_43D63ABE3 I
Traes_4DL_A2012EA68 Triticum aestivum Traes_4DL_A2012EA68 I
Traes_4DS_11C3B0459 Triticum aestivum Traes_4DS_11C3B0459 I
Traes_6AS_4EEA3E388 Triticum aestivum Traes_6AS_4EEA3E388 I
Traes_6BS_179B5B6E1 Triticum aestivum Traes_6BS_179B5B6E1 I
TRIUR3_07751 Triticum urartu TRIUR3_07751 I
VIT_07s0005g03020 Vitis vinifera VIT_07s0005g03020 I
LBD16 Vitis vinifera VIT_07s0005g03030 I
LBD30 Vitis vinifera VIT_15s0048g00830 I
AC149818.2_FG009 Zea mays AC149818.2_FG009 I
GRMZM2G075499 Zea mays GRMZM2G075499 I
GRMZM2G092483 Zea mays GRMZM2G092483 I
GRMZM2G092542 Zea mays GRMZM2G092542 I
GRMZM2G110913 Zea mays GRMZM2G110913 I
GRMZM2G150594 Zea mays GRMZM2G150594 I