OLONG_003602 (Oryza longistaminata)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 OLONG_003602 T255104_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
OLONG_003602-R1 MADS box 9 28
OLONG_003602-R1 MADS box 29 76

Links

Other MADS box family TFs
Other Oryza longistaminata TFs

7 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aquca_014_00674 Aquilegia coerulea Aquca_014_00674 N
evm.TU.supercontig_197.7 Carica papaya evm.TU.supercontig_197.7 N
evm.TU.supercontig_84.12 Carica papaya evm.TU.supercontig_84.12 N
Ca_27441 Cicer arietinum Ca_27441 N
Ca_11133 Cicer arietinum Ca_11133 N
Cla006433 Citrullus lanatus Cla006433 N
Ciclev10031389m.g Citrus clementina Ciclev10031389m.g N
Ciclev10015219m.g Citrus clementina Ciclev10015219m.g N
orange1.1g011736m.g Citrus sinensis orange1.1g011736m.g N
orange1.1g014413m.g Citrus sinensis orange1.1g014413m.g N
Eucgr.B03716 Eucalyptus grandis Eucgr.B03716 N
GLYMA11G10170 Glycine max GLYMA11G10170 N
GLYMA12G02490 Glycine max GLYMA12G02490 N
Gorai.006G125700 Gossypium raimondii Gorai.006G125700 N
chr2.CM0018.90.nc Lotus japonicus chr2.CM0018.90.nc N
chr3.CM0460.90.nd Lotus japonicus chr3.CM0460.90.nd N
LjSGA_017153.1 Lotus japonicus LjSGA_017153.1 N
cassava13860.valid.m1 Manihot esculenta cassava13860.valid.m1 N
cassava31043.valid.m1 Manihot esculenta cassava31043.valid.m1 N
MTR_5g009080 Medicago truncatula MTR_5g009080 N
mgf008315m Mimulus guttatus mgf008315m N
SCL3 Populus trichocarpa POPTR_0009s05330 N
Pm012190 Prunus mume Pm012190 N
PRUPE_ppa005243mg Prunus persica PRUPE_ppa005243mg N
30024.m001746 Ricinus communis 30024.m001746 N
30131.m007244 Ricinus communis 30131.m007244 N
SapurV1A.1723s0080 Salix purpurea SapurV1A.1723s0080 N
Solyc12g099900.1 Solanum lycopersicum Solyc12g099900.1 N
Solyc01g008910.2 Solanum lycopersicum Solyc01g008910.2 N
PGSC0003DMG400022709 Solanum tuberosum PGSC0003DMG400022709 N
PGSC0003DMG400004649 Solanum tuberosum PGSC0003DMG400004649 N
TCM_042392 Theobroma cacao TCM_042392 N
TCM_040833 Theobroma cacao TCM_040833 N
VIT_02s0033g00050 Vitis vinifera VIT_02s0033g00050 N
SCL3 Vitis vinifera VIT_06s0009g02390 N
VIT_13s0019g01220 Vitis vinifera VIT_13s0019g01220 N