ENSMPUG00000006012 (Mustela putorius furo)
Paired box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00292 (PAX) IPR001523 ENSMPUG00000006012 T311705_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Pax5B
M01301_2.00 		Gallus gallus
NSNDTNNNN
NNNNAHNSN		 PBM
Lambert et al.(2019)
pTH9781 		1.000 1.000
PAX5
M03443_2.00 		Homo sapiens
RNBYANYSAWSCGTRACN
NGTYACGSWTSRNTRVNY		 SELEX
Jolma et al.(2013)
PAX5_1 		1.000 1.000
PAX5
M08160_2.00 		Homo sapiens
RDGCGTGACCNN
NNGGTCACGCHY		 ChIP-seq
Mathelier et al.(2014)
MA0014.3 		1.000 1.000
PAX5
M07995_2.00 		Homo sapiens
BCAVYSRDSCRKRRC
GYYMYGSHYSRBTGV		 ChIP-seq
Gerstein et al.(2012)
GM12878_PAX5C20_HudsonAlpha 		1.000 1.000
PAX5
M07996_2.00 		Homo sapiens
BCASYSRDSCRTRAC
GTYAYGSHYSRSTGV		 ChIP-seq
Gerstein et al.(2012)
GM12878_PAX5N19_HudsonAlpha 		1.000 1.000
PAX5
M07997_2.00 		Homo sapiens
CASYSRDSCRKRACN
NGTYMYGSHYSRSTG		 ChIP-seq
Gerstein et al.(2012)
GM12891_PAX5C20_HudsonAlpha 		1.000 1.000
PAX5
M07998_2.00 		Homo sapiens
BCASYSRDSCGKRRC
GYYMCGSHYSRSTGV		 ChIP-seq
Gerstein et al.(2012)
GM12892_PAX5C20_HudsonAlpha 		1.000 1.000
PAX5
M08227_2.00 		Homo sapiens
BCANYSRDGCGTRAM
KTYACGCHYSRNTGV		 ChIP-seq
Contrino et al.(2012)
Mv108 		1.000 1.000
PAX5
M08228_2.00 		Homo sapiens
AGCGTGRCYG
CRGYCACGCT		 ChIP-seq
Contrino et al.(2012)
Mv109 		1.000 1.000
PAX5
M09341_2.00 		Homo sapiens
SNVDGNKCARCVRAGCRDGAC
GTCHYGCTYBGYTGMNCHBNS		 Misc
Kulakovskiy et al.(2013)
PAX5_HUMAN.H11MO.0.A 		1.000 1.000
Pax5
M09342_2.00 		Mus musculus
VDRNBCAVYVRDSCRKRRM
KYYMYGSHYBRBTGVNYHB		 Misc
Kulakovskiy et al.(2013)
PAX5_MOUSE.H11MO.0.A 		1.000 1.000
PAX5
M09622_2.00 		Homo sapiens
BCASYSRDSCRTGRMN
NKYCAYGSHYSRSTGV		 Misc
Heinz et al.(2010)
GM12878-PAX5_GSE32465_1 		1.000 1.000
PAX5
M09623_2.00 		Homo sapiens
BCABNVRSCGTGAC
GTCACGSYBNVTGV		 Misc
Heinz et al.(2010)
GM12878-PAX5_GSE32465_2 		1.000 1.000
PAX5
M11208_2.00 		Homo sapiens
BCNNNRNKCANBGNWGNRKRGMSRSHNB
VNDSYSKCYMYNCWNCVNTGMNYNNNGV		 Transfac
Matys et al.(2006)
V$PAX5_01 		1.000 1.000
PAX5
M11209_2.00 		Homo sapiens
VRHVDGDNDBBTNRAGCGKRACVRYNVH
DBNRYBGTYMCGCTYNAVVHNHCHBDYB		 Transfac
Matys et al.(2006)
V$PAX5_02 		1.000 1.000
PAX5
M11210_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PAX5_06 		1.000 1.000
PAX5
M11211_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PAX5_07 		1.000 1.000
PAX5
M11212_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PAX5_Q6 		1.000 1.000
pax2
M02428_2.00 		Xenopus tropicalis
NNNRNBCRNN
NNYGVNYNNN		 PBM
Weirauch et al.(2014)
pTH8556 		0.976 0.976
pax2b
M02425_2.00 		Danio rerio
HVNYSRNSCR
YGSNYSRNBD		 PBM
Weirauch et al.(2014)
pTH8679 		0.968 0.968
PAX8
M05685_2.00 		Homo sapiens
NRNBYRNYSRWGCGTGACSN
NSGTCACGCWYSRNYRVNYN		 SELEX
Yin et al.(2017)
PAX8_FL_HT-SELEX 		0.936 0.936
Pax8
M09624_2.00 		Rattus norvegicus
BCAGBCADSCRKGVM
KBCMYGSHTGVCTGV		 Misc
Heinz et al.(2010)
Thyroid-Pax8_GSE26938 		0.936 0.936
PAX8
M11205_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PAX8_01 		0.936 0.936
PAX8
M11206_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PAX8_B 		0.936 0.936
PAX8
M05686_2.00 		Homo sapiens
NRNBCRNTSAWSCGYGACNN
NNGTCRCGSWTSANYGVNYN		 SELEX
Yin et al.(2017)
PAX8_FL_Methyl-HT-SELEX 		0.936 0.936
sv
M01302_2.00 		Drosophila melanogaster
NNNSCRBRDM
KHYVYGSNNN		 PBM
Lambert et al.(2019)
pTH9773 		0.880 0.880
sv
M03949_2.00 		Drosophila melanogaster
NBCRNYSAWGCGTGACS
SGTCACGCWTSRNYGVN		 SELEX
Nitta et al.(2015)
sv_1 		0.880 0.880
sv
M06438_2.00 		Drosophila melanogaster
RNYSRDSCGTRACNN
NNGTYACGSHYSRNY		 B1H
Zhu et al.(2011)
sv_SOLEXA_5_FBgn0005561 		0.880 0.880
egl-38
M02426_2.00 		Caenorhabditis elegans
ACCGTGAYCAC
GTGRTCACGGT		 PBM
Weirauch et al.(2014)
pTH8981 		0.752 0.752
pax-2
M00706_2.00 		Caenorhabditis elegans
RMSCRTRACS
SGTYAYGSKY		 PBM
Narasimhan et al.(2015)
pTH10794 		0.752 0.752
Poxn
M03946_2.00 		Drosophila melanogaster
DGCGTGACSGTCACGSY
RSCGTGACSGTCACGCH		 SELEX
Nitta et al.(2015)
Poxn_1 		0.744 0.744
Poxn
M03947_2.00 		Drosophila melanogaster
RSCGKGACSGTTMCGSW
WSCGKAACSGTCMCGSY		 SELEX
Nitta et al.(2015)
Poxn_2 		0.744 0.744
Poxn
M03948_2.00 		Drosophila melanogaster
NCGTTCCGGAACGD
HCGTTCCGGAACGN		 SELEX
Nitta et al.(2015)
Poxn_3 		0.744 0.744
Poxn
M06437_2.00 		Drosophila melanogaster
RSCGTGACG
CGTCACGSY		 B1H
Zhu et al.(2011)
Poxn_SOLEXA_5_FBgn0003130 		0.744 0.744
PAX7
M00346_2.00 		Homo sapiens
NGTYAYGSHN
NDSCRTRACN		 PBM
Barrera et al.(2016)
PAX7_REF 		0.736 0.736
PAX1
M03442_2.00 		Homo sapiens
DBCANTSAWGCGTGACS
SGTCACGCWTSANTGVH		 SELEX
Jolma et al.(2013)
PAX1_1 		0.736 0.736
PAX9
M03444_2.00 		Homo sapiens
NKCANTSAWGCGTGACS
SGTCACGCWTSANTGMN		 SELEX
Jolma et al.(2013)
PAX9_1 		0.736 0.736
Poxm
M03944_2.00 		Drosophila melanogaster
CAVTCAWGCGTGACR
YGTCACGCWTGABTG		 SELEX
Nitta et al.(2015)
Poxm_1 		0.736 0.736
Poxm
M03945_2.00 		Drosophila melanogaster
NYSAWGCRTRACS
SGTYAYGCWTSRN		 SELEX
Nitta et al.(2015)
Poxm_2 		0.736 0.736
PAX1
M05687_2.00 		Homo sapiens
BCRNTSRWGCGTGACSN
NSGTCACGCWYSANYGV		 SELEX
Yin et al.(2017)
PAX1_eDBD_HT-SELEX 		0.736 0.736
PAX9
M05689_2.00 		Homo sapiens
BHRNYSRDSCGTRACSN
NSGTYACGSHYSRNYDV		 SELEX
Yin et al.(2017)
PAX9_eDBD_HT-SELEX 		0.736 0.736
Poxm
M06436_2.00 		Drosophila melanogaster
NNNNNNMVNHNRNSCRTGA
TCAYGSNYNDNBKNNNNNN		 B1H
Zhu et al.(2011)
Poxm_SOLEXA_5_FBgn0003129 		0.736 0.736
PAX1
M11207_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PAX1_B 		0.736 0.736
PAX1
M05688_2.00 		Homo sapiens
BCRNTSAWGCGTGACSN
NSGTCACGCWTSANYGV		 SELEX
Yin et al.(2017)
PAX1_eDBD_Methyl-HT-SELEX 		0.736 0.736
PAX9
M05690_2.00 		Homo sapiens
BCRNTSAWSCGYGACNN
NNGTCRCGSWTSANYGV		 SELEX
Yin et al.(2017)
PAX9_eDBD_Methyl-HT-SELEX 		0.736 0.736
pax9
M11204_2.00 		Danio rerio Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PAX9_B 		0.728 0.728
PAX7
M00345_2.00 		Homo sapiens
NSGTCACGSN
NSCGTGACSN		 PBM
Barrera et al.(2016)
PAX7_P112L 		0.728 0.728
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSMPUP00000005960 Paired box 16 140

Links

Other Paired box family TFs
Other Mustela putorius furo TFs

608 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aquca_027_00077 Aquilegia coerulea Aquca_027_00077 I
fgenesh1_pm.C_scaffold_5001425 Arabidopsis lyrata fgenesh1_pm.C_scaffold_5001425 I
scaffold_402348.1 Arabidopsis lyrata scaffold_402348.1 I
S1FA3 Arabidopsis thaliana AT3G09735 D
S1FA1 Arabidopsis thaliana AT3G53370 I
S1FA2 Arabidopsis thaliana AT2G37120 I
Bostr.23794s0377 Boechera stricta Bostr.23794s0377 I
Bostr.22252s0094 Boechera stricta Bostr.22252s0094 I
Bostr.11793s0058 Boechera stricta Bostr.11793s0058 I
BRADI5G09140 Brachypodium distachyon BRADI5G09140 N
Bo00703s130 Brassica oleracea Bo00703s130 I
Bo00703s150 Brassica oleracea Bo00703s150 I
Bo1g144300 Brassica oleracea Bo1g144300 I
Bo3g061880 Brassica oleracea Bo3g061880 I
Bo5g138130 Brassica oleracea Bo5g138130 I
Bo6g067310 Brassica oleracea Bo6g067310 I
Bra034084 Brassica rapa Bra034084 I
Bra039779 Brassica rapa Bra039779 I
Bra029784 Brassica rapa Bra029784 I
Bra006994 Brassica rapa Bra006994 I
Bra003132 Brassica rapa Bra003132 I
Cagra.0612s0062 Capsella grandiflora Cagra.0612s0062 I
Cagra.2515s0064 Capsella grandiflora Cagra.2515s0064 I
Cagra.0666s0032 Capsella grandiflora Cagra.0666s0032 I
Carubv10025429m.g Capsella rubella Carubv10025429m.g I
Carubv10015035m.g Capsella rubella Carubv10015035m.g I
evm.TU.supercontig_638.2 Carica papaya evm.TU.supercontig_638.2 I
Cla018556 Citrullus lanatus Cla018556 I
Cla018106 Citrullus lanatus Cla018106 I
Ciclev10013218m.g Citrus clementina Ciclev10013218m.g I
orange1.1g044991m.g Citrus sinensis orange1.1g044991m.g I
Cucsa.307040 Cucumis sativus Cucsa.307040 I
Cucsa.124240 Cucumis sativus Cucsa.124240 I
Eucgr.A01168 Eucalyptus grandis Eucgr.A01168 I
Thhalv10021874m.g Eutrema salsugineum Thhalv10021874m.g I
Thhalv10010878m.g Eutrema salsugineum Thhalv10010878m.g I
Thhalv10017496m.g Eutrema salsugineum Thhalv10017496m.g I
GLYMA19G36350 Glycine max GLYMA19G36350 I
GLYMA10G05790 Glycine max GLYMA10G05790 I
GLYMA03G33640 Glycine max GLYMA03G33640 I
Gorai.009G419300 Gossypium raimondii Gorai.009G419300 I
Gorai.006G168100 Gossypium raimondii Gorai.006G168100 I
Gorai.002G249300 Gossypium raimondii Gorai.002G249300 I
MLOC_67411 Hordeum vulgare MLOC_67411 N
LPERR04G08400 Leersia perrieri LPERR04G08400 N
Lus10023177.g Linum usitatissimum Lus10023177.g I
Lus10015073.g Linum usitatissimum Lus10015073.g I
cassava45931.m1 Manihot esculenta cassava45931.m1 I
MTR_7g100880 Medicago truncatula MTR_7g100880 I
MTR_7g100890 Medicago truncatula MTR_7g100890 I
MTR_7g100905 Medicago truncatula MTR_7g100905 I
mgf000337m Mimulus guttatus mgf000337m I
mgf004062m Mimulus guttatus mgf004062m I
GSMUA_Achr10G13120_001 Musa acuminata GSMUA_Achr10G13120_001 I
OBART04G11660 Oryza barthii OBART04G11660 N
OBART04G11650 Oryza barthii OBART04G11650 N
OB04G18770 Oryza brachyantha OB04G18770 I
OB04G18780 Oryza brachyantha OB04G18780 I
ORGLA04G0086800 Oryza glaberrima ORGLA04G0086800 N
ORGLA04G0086600 Oryza glaberrima ORGLA04G0086600 N
OGLUM04G11340 Oryza glumaepatula OGLUM04G11340 N
OGLUM04G11330 Oryza glumaepatula OGLUM04G11330 N
BGIOSGA015143 Oryza indica BGIOSGA015143 N
BGIOSGA015145 Oryza indica BGIOSGA015145 N
BGIOSGA015142 Oryza indica BGIOSGA015142 N
OMERI04G10280 Oryza meridionalis OMERI04G10280 N
ONIVA04G09620 Oryza nivara ONIVA04G09620 N
ONIVA04G09610 Oryza nivara ONIVA04G09610 N
OPUNC04G09660 Oryza punctata OPUNC04G09660 N
ORUFI04G12840 Oryza rufipogon ORUFI04G12840 N
ORUFI04G12850 Oryza rufipogon ORUFI04G12850 N
S1FA2 Oryza sativa OS04G0408700 N
OS04G0408900 Oryza sativa OS04G0408900 N
Pavir.Gb01773 Panicum virgatum Pavir.Gb01773 N
Pavir.Ga01929 Panicum virgatum Pavir.Ga01929 N
POPTR_0006s13230 Populus trichocarpa POPTR_0006s13230 I
POPTR_0016s08890 Populus trichocarpa POPTR_0016s08890 I
Pm002519 Prunus mume Pm002519 N
PRUPE_ppa014157mg Prunus persica PRUPE_ppa014157mg N
29805.m001471 Ricinus communis 29805.m001471 I
SapurV1A.0112s0080 Salix purpurea SapurV1A.0112s0080 I
SapurV1A.0209s0130 Salix purpurea SapurV1A.0209s0130 I
Si011030m.g Setaria italica Si011030m.g N
Solyc09g007500.2 Solanum lycopersicum Solyc09g007500.2 I
PGSC0003DMG400020934 Solanum tuberosum PGSC0003DMG400020934 I
PGSC0003DMG400001772 Solanum tuberosum PGSC0003DMG400001772 I
Sb06g015340 Sorghum bicolor Sb06g015340 N
TCM_022113 Theobroma cacao TCM_022113 I
Traes_2AL_65586C538 Triticum aestivum Traes_2AL_65586C538 N
Traes_2BL_26A5F9082 Triticum aestivum Traes_2BL_26A5F9082 N
Traes_2DL_032C7FC8C Triticum aestivum Traes_2DL_032C7FC8C N
VIT_06s0004g03160 Vitis vinifera VIT_06s0004g03160 I
VIT_08s0040g02220 Vitis vinifera VIT_08s0040g02220 I
GRMZM2G147424 Zea mays GRMZM2G147424 N