COCSADRAFT_95191 (Bipolaris sorokiniana)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00172 (Zn_clus) IPR001138 COCSADRAFT_95191 T365317_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
adv-1
M02624_2.00 		Neurospora crassa
VGCGSYWMN
NKWRSCGCB		 PBM
Weirauch et al.(2014)
pTH9685 		0.556 0.872
ANIA_01848
M01400_2.00 		Aspergillus nidulans
NVGCGBBWVN
NBWVVCGCBN		 PBM
Lambert et al.(2019)
pEX0279 		0.553 0.744
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EMD62050 Zinc cluster 25 63

Links

Other Zinc cluster family TFs
Other Bipolaris sorokiniana TFs

91 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_10696 Aegilops tauschii F775_10696 N 0.000
AMTR_s00093p00057150 Amborella trichopoda AMTR_s00093p00057150 N 0.000
Aquca_013_00142 Aquilegia coerulea Aquca_013_00142 I 0.000
BRADI3G09690 Brachypodium distachyon BRADI3G09690 I 0.000
Cla011101 Citrullus lanatus Cla011101 I 0.000
Eucgr.E00847 Eucalyptus grandis Eucgr.E00847 I 0.000
GLYMA08G02550 Glycine max GLYMA08G02550 N 0.000
GLYMA05G37010 Glycine max GLYMA05G37010 I 0.000
Gorai.007G025500 Gossypium raimondii Gorai.007G025500 I 0.000
MLOC_57360 Hordeum vulgare MLOC_57360 N 0.000
LPERR02G09420 Leersia perrieri LPERR02G09420 N 0.000
chr4.CM0025.190.nd Lotus japonicus chr4.CM0025.190.nd I 0.000
mgf015439m Mimulus guttatus mgf015439m I 0.000
GSMUA_Achr6G14260_001 Musa acuminata GSMUA_Achr6G14260_001 I 0.000
OBART02G11160 Oryza barthii OBART02G11160 I 0.000
OGLUM02G11100 Oryza glumaepatula OGLUM02G11100 I 0.000
BGIOSGA006746 Oryza indica BGIOSGA006746 I 0.000
OLONG_021730 Oryza longistaminata OLONG_021730 N 0.000
OMERI02G11890 Oryza meridionalis OMERI02G11890 N 0.000
ONIVA02G12490 Oryza nivara ONIVA02G12490 I 0.000
OPUNC02G09900 Oryza punctata OPUNC02G09900 I 0.000
ORUFI02G11130 Oryza rufipogon ORUFI02G11130 I 0.000
Pavir.J07596 Panicum virgatum Pavir.J07596 I 0.000
Pavir.Ab01026 Panicum virgatum Pavir.Ab01026 I 0.000
POPTR_0001s10410 Populus trichocarpa POPTR_0001s10410 I 0.000
Pm024077 Prunus mume Pm024077 I 0.000
PRUPE_ppa004611mg Prunus persica PRUPE_ppa004611mg I 0.000
30190.m010807 Ricinus communis 30190.m010807 I 0.000
Si017040m.g Setaria italica Si017040m.g I 0.000
Sb04g009610 Sorghum bicolor Sb04g009610 I 0.000
TCM_016416 Theobroma cacao TCM_016416 I 0.000
Traes_2AL_72F4E1905 Triticum aestivum Traes_2AL_72F4E1905 I 0.000
VIT_02s0025g01220 Vitis vinifera VIT_02s0025g01220 I 0.000
GRMZM2G060253 Zea mays GRMZM2G060253 I 0.000