evm.TU.supercontig_1.178 (Carica papaya)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 evm.TU.supercontig_1.178 T008257_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF118
M01047_2.00 		Arabidopsis thaliana
NCGCCGYNN
NNRCGGCGN		 PBM
Sullivan et al.(2014)
pTH7330 		0.711 0.812
ERF118
M06591_2.00 		Arabidopsis thaliana
YHDYCKCCGCCGYHD
HDRCGGCGGMGRHDR		 Dap-seq
OMalley et al.(2016)
CRF10_col100_a 		0.711 0.812
ERF118
M06592_2.00 		Arabidopsis thaliana
NGDATCHNDGATTCNNH
DNNGAATCHNDGATHCN		 Dap-seq
OMalley et al.(2016)
CRF10_colamp_a 		0.711 0.812
ERF119
M01093_2.00 		Arabidopsis thaliana
NNNGCCGNN
NNCGGCNNN		 PBM
Lambert et al.(2019)
pTH11551 		0.697 0.771
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
evm.model.supercontig_1.178 AP2 131 181

Links

Other AP2 family TFs
Other Carica papaya TFs

20 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Gorai.008G183300 Gossypium raimondii Gorai.008G183300 I 0.767
TCM_011811 Theobroma cacao TCM_011811 I 0.767
Cagra.3364s0010 Capsella grandiflora Cagra.3364s0010 I 0.731
Carubv10021988m.g Capsella rubella Carubv10021988m.g I 0.731
scaffold_500470.1 Arabidopsis lyrata scaffold_500470.1 I 0.722
Carubv10017565m.g Capsella rubella Carubv10017565m.g I 0.721
Cagra.6197s0021 Capsella grandiflora Cagra.6197s0021 I 0.721
Bra036360 Brassica rapa Bra036360 I 0.715
ERF118 Arabidopsis thaliana AT1G68550 D 0.711
Thhalv10004526m.g Eutrema salsugineum Thhalv10004526m.g I 0.707
Bostr.0556s0264 Boechera stricta Bostr.0556s0264 I 0.707
Bo7g082250 Brassica oleracea Bo7g082250 I 0.706
Bra025170 Brassica rapa Bra025170 I 0.706
Bo2g138790 Brassica oleracea Bo2g138790 I 0.697
ERF119 Arabidopsis thaliana AT3G25890 D 0.697
fgenesh2_kg.2__1107__AT1G68550.2 Arabidopsis lyrata fgenesh2_kg.2__1107__AT1G68550.2 I 0.697
Gorai.013G076100 Gossypium raimondii Gorai.013G076100 N 0.691
Bostr.26959s0035 Boechera stricta Bostr.26959s0035 I 0.688
POPTR_0010s13540 Populus trichocarpa POPTR_0010s13540 I 0.686
SapurV1A.0078s0470 Salix purpurea SapurV1A.0078s0470 I 0.686