Thhalv10004526m.g (Eutrema salsugineum)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Thhalv10004526m.g T009886_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF119
M01093_2.00 		Arabidopsis thaliana
NNNGCCGNN
NNCGGCNNN		 PBM
Lambert et al.(2019)
pTH11551 		0.799 0.980
ERF118
M01047_2.00 		Arabidopsis thaliana
NCGCCGYNN
NNRCGGCGN		 PBM
Sullivan et al.(2014)
pTH7330 		0.703 0.760
ERF118
M06591_2.00 		Arabidopsis thaliana
YHDYCKCCGCCGYHD
HDRCGGCGGMGRHDR		 Dap-seq
OMalley et al.(2016)
CRF10_col100_a 		0.703 0.760
ERF118
M06592_2.00 		Arabidopsis thaliana
NGDATCHNDGATTCNNH
DNNGAATCHNDGATHCN		 Dap-seq
OMalley et al.(2016)
CRF10_colamp_a 		0.703 0.760
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Thhalv10004526m AP2 126 176

Links

Other AP2 family TFs
Other Eutrema salsugineum TFs

16 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bo7g082250 Brassica oleracea Bo7g082250 I 0.808
Bra025170 Brassica rapa Bra025170 I 0.808
ERF119 Arabidopsis thaliana AT3G25890 D 0.799
scaffold_500470.1 Arabidopsis lyrata scaffold_500470.1 I 0.792
Carubv10017565m.g Capsella rubella Carubv10017565m.g I 0.791
Cagra.6197s0021 Capsella grandiflora Cagra.6197s0021 I 0.791
Bostr.0556s0264 Boechera stricta Bostr.0556s0264 I 0.790
Bra036360 Brassica rapa Bra036360 I 0.774
Bo2g138790 Brassica oleracea Bo2g138790 I 0.757
Bostr.26959s0035 Boechera stricta Bostr.26959s0035 I 0.736
fgenesh2_kg.2__1107__AT1G68550.2 Arabidopsis lyrata fgenesh2_kg.2__1107__AT1G68550.2 I 0.716
Thhalv10019722m.g Eutrema salsugineum Thhalv10019722m.g I 0.710
evm.TU.supercontig_1.178 Carica papaya evm.TU.supercontig_1.178 I 0.707
TCM_011811 Theobroma cacao TCM_011811 I 0.706
Gorai.008G183300 Gossypium raimondii Gorai.008G183300 I 0.706
ERF118 Arabidopsis thaliana AT1G68550 D 0.703