CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bostr.0556s0643
(
Boechera stricta
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02892 (zf-BED)
IPR003656
Bostr.0556s0643
T028179_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bostr.0556s0643.1.p
BED ZF
28
85
SMVWEHFTIEAVEPNCRRAFCKGCNQSFAYSNGNKVAGTSHLKRHIAKGTCPALIHTH
Links
Other
BED ZF
family TFs
Other
Boechera stricta
TFs
49 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
HAT
Arabidopsis thaliana
AT3G42170
N
1.000
fgenesh1_pm.C_scaffold_5000603
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_5000603
N
0.930
Cagra.13611s0003
Capsella grandiflora
Cagra.13611s0003
N
0.907
Carubv10008021m.g
Capsella rubella
Carubv10008021m.g
N
0.907
Bo6g018310
Brassica oleracea
Bo6g018310
N
0.818
Bo4g137780
Brassica oleracea
Bo4g137780
N
0.818
Thhalv10002435m.g
Eutrema salsugineum
Thhalv10002435m.g
N
0.795
gene30791-v1.0-hybrid
Fragaria vesca
gene30791-v1.0-hybrid
N
0.791
gene31107-v1.0-hybrid
Fragaria vesca
gene31107-v1.0-hybrid
N
0.791
POPTR_0018s12680
Populus trichocarpa
POPTR_0018s12680
N
0.791
Eucgr.C01383
Eucalyptus grandis
Eucgr.C01383
N
0.791
POPTR_0004s12760
Populus trichocarpa
POPTR_0004s12760
N
0.791
MDP0000394762
Malus domestica
MDP0000394762
N
0.791
GLYMA13G22855
Glycine max
GLYMA13G22855
N
0.791
GLYMA13G22881
Glycine max
GLYMA13G22881
N
0.791
SapurV1A.0197s0170
Salix purpurea
SapurV1A.0197s0170
N
0.773
SapurV1A.0034s0250
Salix purpurea
SapurV1A.0034s0250
N
0.767
POPTR_0018s12690
Populus trichocarpa
POPTR_0018s12690
N
0.767
POPTR_0004s12810
Populus trichocarpa
POPTR_0004s12810
N
0.767
GLYMA16G32921
Glycine max
GLYMA16G32921
N
0.767
Cucsa.036140
Cucumis sativus
Cucsa.036140
N
0.767
Lus10032337.g
Linum usitatissimum
Lus10032337.g
N
0.767
VIT_11s0016g05750
Vitis vinifera
VIT_11s0016g05750
N
0.767
mgf025287m
Mimulus guttatus
mgf025287m
N
0.750
Gorai.010G061600
Gossypium raimondii
Gorai.010G061600
N
0.750
GLYMA17G11981
Glycine max
GLYMA17G11981
N
0.750
PK27100.1
Cannabis sativa
PK27100.1
N
0.750
orange1.1g002915m.g
Citrus sinensis
orange1.1g002915m.g
N
0.750
Ciclev10007308m.g
Citrus clementina
Ciclev10007308m.g
N
0.750
Gorai.010G061500
Gossypium raimondii
Gorai.010G061500
N
0.750
TCM_038144
Theobroma cacao
TCM_038144
N
0.744
Gorai.004G107300
Gossypium raimondii
Gorai.004G107300
N
0.727
MDP0000197332
Malus domestica
MDP0000197332
N
0.727
PRUPE_ppa001983mg
Prunus persica
PRUPE_ppa001983mg
N
0.727
Solyc12g009640.1
Solanum lycopersicum
Solyc12g009640.1
N
0.727
GLYMA09G28061
Glycine max
GLYMA09G28061
N
0.727
PGSC0003DMG400002911
Solanum tuberosum
PGSC0003DMG400002911
N
0.727
BGIOSGA009862
Oryza indica
BGIOSGA009862
N
0.721
Thhalv10022530m.g
Eutrema salsugineum
Thhalv10022530m.g
N
0.721
BGIOSGA020445
Oryza indica
BGIOSGA020445
N
0.721
BGIOSGA018468
Oryza indica
BGIOSGA018468
N
0.721
GSMUA_Achr10G16260_001
Musa acuminata
GSMUA_Achr10G16260_001
N
0.721
ORGLA03G0300400
Oryza glaberrima
ORGLA03G0300400
N
0.721
PGSC0003DMG400023690
Solanum tuberosum
PGSC0003DMG400023690
N
0.721
Solyc10g080090.1
Solanum lycopersicum
Solyc10g080090.1
N
0.721
OS03G0733400
Oryza sativa
OS03G0733400
N
0.721
ORGLA05G0236800
Oryza glaberrima
ORGLA05G0236800
N
0.721
ORGLA05G0072400
Oryza glaberrima
ORGLA05G0072400
N
0.721
GSMUA_Achr3G02770_001
Musa acuminata
GSMUA_Achr3G02770_001
N
0.721