OS04G0489600 (Oryza sativa)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 OS04G0489600 T043207_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT2G42280
M06733_2.00 		Arabidopsis thaliana
DNCMACTTGYH
DRCAAGTKGNH		 Dap-seq
OMalley et al.(2016)
bHLH130_col_a 		0.887 0.863
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OS04T0489600-02 bHLH 292 342

Links

Other bHLH family TFs
Other Oryza sativa TFs

120 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
OMERI04G14260 Oryza meridionalis OMERI04G14260 I 0.914
OB04G24170 Oryza brachyantha OB04G24170 I 0.914
ONIVA04G15000 Oryza nivara ONIVA04G15000 I 0.914
OGLUM04G16920 Oryza glumaepatula OGLUM04G16920 I 0.914
LPERR04G13560 Leersia perrieri LPERR04G13560 I 0.914
OBART04G16900 Oryza barthii OBART04G16900 I 0.914
MLOC_12058 Hordeum vulgare MLOC_12058 I 0.914
ORGLA04G0140000 Oryza glaberrima ORGLA04G0140000 I 0.914
BRADI3G48070 Brachypodium distachyon BRADI3G48070 I 0.914
ORUFI04G18350 Oryza rufipogon ORUFI04G18350 I 0.914
BGIOSGA016651 Oryza indica BGIOSGA016651 I 0.914
OPUNC04G14700 Oryza punctata OPUNC04G14700 I 0.914
Thhalv10008050m.g Eutrema salsugineum Thhalv10008050m.g I 0.894
BHLH128 Arabidopsis thaliana AT1G05805 I 0.894
Carubv10009382m.g Capsella rubella Carubv10009382m.g I 0.894
Ciclev10020681m.g Citrus clementina Ciclev10020681m.g I 0.894
Traes_6AL_9437F730F Triticum aestivum Traes_6AL_9437F730F I 0.894
Cucsa.094340 Cucumis sativus Cucsa.094340 I 0.894
Cagra.1671s0210 Capsella grandiflora Cagra.1671s0210 I 0.894
MTR_1g116790 Medicago truncatula MTR_1g116790 I 0.894
Ca_14007 Cicer arietinum Ca_14007 I 0.894
F775_26506 Aegilops tauschii F775_26506 I 0.894
Traes_6DL_62A15AED6 Triticum aestivum Traes_6DL_62A15AED6 I 0.894
Traes_6BL_868408DFC Triticum aestivum Traes_6BL_868408DFC I 0.894
TRIUR3_16394 Triticum urartu TRIUR3_16394 I 0.894
fgenesh2_kg.1__542__AT1G05805.1 Arabidopsis lyrata fgenesh2_kg.1__542__AT1G05805.1 I 0.894
Bostr.25219s0385 Boechera stricta Bostr.25219s0385 I 0.894
orange1.1g038558m.g Citrus sinensis orange1.1g038558m.g I 0.894
Eucgr.A00213 Eucalyptus grandis Eucgr.A00213 I 0.891
Bra015456 Brassica rapa Bra015456 I 0.891
Lus10025518.g Linum usitatissimum Lus10025518.g I 0.891
Bo5g007030 Brassica oleracea Bo5g007030 I 0.891
Bo5g006980 Brassica oleracea Bo5g006980 I 0.891
PDK_20s1546591g001 Phoenix dactylifera PDK_20s1546591g001 I 0.891
Lus10026733.g Linum usitatissimum Lus10026733.g I 0.891
POPTR_0003s22290 Populus trichocarpa POPTR_0003s22290 I 0.887
Cagra.2636s0012 Capsella grandiflora Cagra.2636s0012 I 0.887
30169.m006403 Ricinus communis 30169.m006403 I 0.887
LPERR09G10800 Leersia perrieri LPERR09G10800 I 0.887
scaffold_403077.1 Arabidopsis lyrata scaffold_403077.1 I 0.887
SapurV1A.0009s0400 Salix purpurea SapurV1A.0009s0400 I 0.887
AT2G42280 Arabidopsis thaliana AT2G42280 D 0.887
Carubv10023498m.g Capsella rubella Carubv10023498m.g I 0.887
MDP0000307685 Malus domestica MDP0000307685 I 0.887
VIT_06s0004g01740 Vitis vinifera VIT_06s0004g01740 I 0.887
LPERR08G16800 Leersia perrieri LPERR08G16800 I 0.887
GSMUA_Achr1G27710_001 Musa acuminata GSMUA_Achr1G27710_001 I 0.879
Ca_07284 Cicer arietinum Ca_07284 I 0.879
GSMUA_Achr8G01370_001 Musa acuminata GSMUA_Achr8G01370_001 I 0.879
GSMUA_Achr8G32130_001 Musa acuminata GSMUA_Achr8G32130_001 I 0.879
Bostr.25993s0551 Boechera stricta Bostr.25993s0551 I 0.865
MTR_7g092540 Medicago truncatula MTR_7g092540 I 0.860
ORUFI01G44010 Oryza rufipogon ORUFI01G44010 I 0.857
TRAES3BF135900010CFD_g Triticum aestivum TRAES3BF135900010CFD_g I 0.857
OS01G0900800 Oryza sativa OS01G0900800 I 0.857
Traes_3AL_B68C491B0 Triticum aestivum Traes_3AL_B68C491B0 I 0.857
TRIUR3_33816 Triticum urartu TRIUR3_33816 I 0.857
OB01G49420 Oryza brachyantha OB01G49420 I 0.857
LPERR01G35240 Leersia perrieri LPERR01G35240 I 0.857
ORGLA01G0346300 Oryza glaberrima ORGLA01G0346300 I 0.857
F775_24576 Aegilops tauschii F775_24576 I 0.857
BRADI2G57800 Brachypodium distachyon BRADI2G57800 I 0.857
BGIOSGA004992 Oryza indica BGIOSGA004992 I 0.857
OBART01G40680 Oryza barthii OBART01G40680 I 0.857
MLOC_20318 Hordeum vulgare MLOC_20318 I 0.857
OGLUM01G44860 Oryza glumaepatula OGLUM01G44860 I 0.857
OMERI01G37660 Oryza meridionalis OMERI01G37660 I 0.857
ONIVA01G45730 Oryza nivara ONIVA01G45730 I 0.857
OPUNC01G39450 Oryza punctata OPUNC01G39450 I 0.857
OLONG_004619 Oryza longistaminata OLONG_004619 I 0.857
Pavir.J08536 Panicum virgatum Pavir.J08536 I 0.856
Pavir.Gb01377 Panicum virgatum Pavir.Gb01377 I 0.856
Pavir.Ab02229 Panicum virgatum Pavir.Ab02229 I 0.856
Pavir.Ga01365 Panicum virgatum Pavir.Ga01365 I 0.856
ORUFI02G24640 Oryza rufipogon ORUFI02G24640 I 0.856
OLONG_009256 Oryza longistaminata OLONG_009256 I 0.856
OMERI02G22740 Oryza meridionalis OMERI02G22740 I 0.856
ORGLA02G0200100 Oryza glaberrima ORGLA02G0200100 I 0.856
GRMZM2G437481 Zea mays GRMZM2G437481 I 0.856
ONIVA02G26110 Oryza nivara ONIVA02G26110 I 0.856
OPUNC02G21170 Oryza punctata OPUNC02G21170 I 0.856
Sb04g025260 Sorghum bicolor Sb04g025260 I 0.856
OBART02G23210 Oryza barthii OBART02G23210 I 0.856
Sb06g020810 Sorghum bicolor Sb06g020810 I 0.856
Si010513m.g Setaria italica Si010513m.g I 0.856
LPERR02G18900 Leersia perrieri LPERR02G18900 I 0.856
BGIOSGA008576 Oryza indica BGIOSGA008576 I 0.856
OB02G30670 Oryza brachyantha OB02G30670 I 0.856
GRMZM2G114873 Zea mays GRMZM2G114873 I 0.854
Pavir.J01306 Panicum virgatum Pavir.J01306 I 0.854
Sb03g042860 Sorghum bicolor Sb03g042860 I 0.854
Si001123m.g Setaria italica Si001123m.g I 0.854
e_gw1.272.41.1 Physcomitrella patens e_gw1.272.41.1 I 0.853
Pavir.Ba00676 Panicum virgatum Pavir.Ba00676 I 0.851
Bo4g015860 Brassica oleracea Bo4g015860 I 0.851
GRMZM2G153454 Zea mays GRMZM2G153454 I 0.851
Pavir.Bb03157 Panicum virgatum Pavir.Bb03157 I 0.851
Pavir.Fa00493 Panicum virgatum Pavir.Fa00493 I 0.851
Pavir.J25484 Panicum virgatum Pavir.J25484 I 0.851
Bra004678 Brassica rapa Bra004678 I 0.851
GRMZM2G142932 Zea mays GRMZM2G142932 I 0.851
BRADI4G33670 Brachypodium distachyon BRADI4G33670 I 0.851
MTR_1g052470 Medicago truncatula MTR_1g052470 I 0.851
Ca_18899 Cicer arietinum Ca_18899 I 0.851
Cucsa.143260 Cucumis sativus Cucsa.143260 I 0.851
Sb07g027810 Sorghum bicolor Sb07g027810 I 0.851
Si013950m.g Setaria italica Si013950m.g I 0.851
Si030166m.g Setaria italica Si030166m.g I 0.851
mgf016092m Mimulus guttatus mgf016092m I 0.851
Cla006394 Citrullus lanatus Cla006394 I 0.851
Traes_5BL_4317E525B Triticum aestivum Traes_5BL_4317E525B I 0.851
MLOC_30102 Hordeum vulgare MLOC_30102 I 0.851
MTR_4g065870 Medicago truncatula MTR_4g065870 I 0.851
GSMUA_Achr6G21220_001 Musa acuminata GSMUA_Achr6G21220_001 I 0.845
Pavir.Aa01423 Panicum virgatum Pavir.Aa01423 I 0.845
PDK_20s1630671g001 Phoenix dactylifera PDK_20s1630671g001 I 0.844
PDK_20s1484071g001 Phoenix dactylifera PDK_20s1484071g001 I 0.844
evm.TU.supercontig_85.115 Carica papaya evm.TU.supercontig_85.115 I 0.841
SapurV1A.0111s0030 Salix purpurea SapurV1A.0111s0030 I 0.839
SapurV1A.1898s0040 Salix purpurea SapurV1A.1898s0040 I 0.839