SapurV1A.1898s0040 (Salix purpurea)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 SapurV1A.1898s0040 T051148_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
OS08G0506700
M01755_2.00
Oryza sativa
NCCACTTGN

NCAAGTGGN
PBM
Weirauch et al.(2014)
pTH8547
0.888 0.857
BHLH122
M06724_2.00
Arabidopsis thaliana
NNDNCMACTTGNNH

DNNCAAGTKGNHNN
Dap-seq
OMalley et al.(2016)
bHLH122_col100_a
0.864 0.816
BHLH122
M06725_2.00
Arabidopsis thaliana
DNCMACTTGYN

NRCAAGTKGNH
Dap-seq
OMalley et al.(2016)
bHLH122_colamp_a
0.864 0.816
BHLH80
M06722_2.00
Arabidopsis thaliana
DNCMACTTGCH

DGCAAGTKGNH
Dap-seq
OMalley et al.(2016)
bHLH80_col_a
0.846 0.755
BHLH80
M06723_2.00
Arabidopsis thaliana
DKCMACTTGCA

TGCAAGTKGMH
Dap-seq
OMalley et al.(2016)
bHLH80_colamp_a
0.846 0.755
AT2G42280
M06733_2.00
Arabidopsis thaliana
DNCMACTTGYH

DRCAAGTKGNH
Dap-seq
OMalley et al.(2016)
bHLH130_col_a
0.841 0.857
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SapurV1A.1898s0040.1.p bHLH 348 396
SapurV1A.1898s0040.2.p bHLH 348 396
SapurV1A.1898s0040.3.p bHLH 348 396

Links

Other bHLH family TFs
Other Salix purpurea TFs

246 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
SapurV1A.0111s0030 Salix purpurea SapurV1A.0111s0030 I 0.914
evm.TU.supercontig_85.115 Carica papaya evm.TU.supercontig_85.115 I 0.912
VIT_13s0064g01290 Vitis vinifera VIT_13s0064g01290 I 0.902
Solyc01g086870.2 Solanum lycopersicum Solyc01g086870.2 I 0.902
30152.m002405 Ricinus communis 30152.m002405 I 0.902
POPTR_0009s06910 Populus trichocarpa POPTR_0009s06910 I 0.902
PGSC0003DMG400025263 Solanum tuberosum PGSC0003DMG400025263 I 0.902
cassava29651.valid.m1 Manihot esculenta cassava29651.valid.m1 I 0.902
cassava30692.valid.m1 Manihot esculenta cassava30692.valid.m1 I 0.899
Pm000447 Prunus mume Pm000447 I 0.899
Pm025821 Prunus mume Pm025821 I 0.899
cassava2126.valid.m1 Manihot esculenta cassava2126.valid.m1 I 0.899
29216.m000261 Ricinus communis 29216.m000261 I 0.899
Solyc10g079050.1 Solanum lycopersicum Solyc10g079050.1 I 0.899
POPTR_0016s05100 Populus trichocarpa POPTR_0016s05100 I 0.899
POPTR_0006s05640 Populus trichocarpa POPTR_0006s05640 I 0.899
PGSC0003DMG400008153 Solanum tuberosum PGSC0003DMG400008153 I 0.899
PRUPE_ppa006295mg Prunus persica PRUPE_ppa006295mg I 0.899
PRUPE_ppa019977mg Prunus persica PRUPE_ppa019977mg I 0.899
VIT_08s0007g07810 Vitis vinifera VIT_08s0007g07810 I 0.899
cassava35967.valid.m1 Manihot esculenta cassava35967.valid.m1 I 0.899
Cla017792 Citrullus lanatus Cla017792 I 0.899
mgf016734m Mimulus guttatus mgf016734m I 0.899
MDP0000180376 Malus domestica MDP0000180376 I 0.899
Lus10031826.g Linum usitatissimum Lus10031826.g I 0.899
Lus10031255.g Linum usitatissimum Lus10031255.g I 0.899
Lus10021023.g Linum usitatissimum Lus10021023.g I 0.899
orange1.1g018007m.g Citrus sinensis orange1.1g018007m.g I 0.899
SapurV1A.0018s0320 Salix purpurea SapurV1A.0018s0320 I 0.899
PDK_20s1391471g001 Phoenix dactylifera PDK_20s1391471g001 I 0.899
PK18038.1 Cannabis sativa PK18038.1 I 0.899
SapurV1A.0133s0050 Salix purpurea SapurV1A.0133s0050 I 0.899
Gorai.006G140200 Gossypium raimondii Gorai.006G140200 I 0.899
Gorai.002G228900 Gossypium raimondii Gorai.002G228900 I 0.899
Aquca_009_00280 Aquilegia coerulea Aquca_009_00280 I 0.899
GSMUA_Achr5G22310_001 Musa acuminata GSMUA_Achr5G22310_001 I 0.899
Cucsa.242910 Cucumis sativus Cucsa.242910 I 0.899
Ciclev10005233m.g Citrus clementina Ciclev10005233m.g I 0.899
Eucgr.A02417 Eucalyptus grandis Eucgr.A02417 I 0.899
gene20622-v1.0-hybrid Fragaria vesca gene20622-v1.0-hybrid I 0.899
gene00545-v1.0-hybrid Fragaria vesca gene00545-v1.0-hybrid I 0.899
evm.TU.supercontig_84.89 Carica papaya evm.TU.supercontig_84.89 I 0.899
cassava44054.valid.m1 Manihot esculenta cassava44054.valid.m1 I 0.899
TCM_024842 Theobroma cacao TCM_024842 I 0.899
GLYMA10G12150 Glycine max GLYMA10G12150 I 0.899
Pavir.Gb01377 Panicum virgatum Pavir.Gb01377 I 0.897
OBART02G23210 Oryza barthii OBART02G23210 I 0.897
Sb06g020810 Sorghum bicolor Sb06g020810 I 0.897
OLONG_009256 Oryza longistaminata OLONG_009256 I 0.897
Pavir.Ab02229 Panicum virgatum Pavir.Ab02229 I 0.897
ORUFI02G24640 Oryza rufipogon ORUFI02G24640 I 0.897
OPUNC02G21170 Oryza punctata OPUNC02G21170 I 0.897
ORGLA02G0200100 Oryza glaberrima ORGLA02G0200100 I 0.897
ONIVA02G26110 Oryza nivara ONIVA02G26110 I 0.897
OB02G30670 Oryza brachyantha OB02G30670 I 0.897
OMERI02G22740 Oryza meridionalis OMERI02G22740 I 0.897
Sb04g025260 Sorghum bicolor Sb04g025260 I 0.897
Pavir.J08536 Panicum virgatum Pavir.J08536 I 0.897
Si010513m.g Setaria italica Si010513m.g I 0.897
LPERR02G18900 Leersia perrieri LPERR02G18900 I 0.897
BGIOSGA008576 Oryza indica BGIOSGA008576 I 0.897
GRMZM2G437481 Zea mays GRMZM2G437481 I 0.897
Pavir.Ga01365 Panicum virgatum Pavir.Ga01365 I 0.897
ORUFI08G22260 Oryza rufipogon ORUFI08G22260 I 0.888
ORGLA08G0174800 Oryza glaberrima ORGLA08G0174800 I 0.888
OPUNC09G13060 Oryza punctata OPUNC09G13060 I 0.888
TRIUR3_26625 Triticum urartu TRIUR3_26625 I 0.888
ORGLA09G0112900 Oryza glaberrima ORGLA09G0112900 I 0.888
Traes_7DS_B671A4EAD Triticum aestivum Traes_7DS_B671A4EAD I 0.888
BGIOSGA031008 Oryza indica BGIOSGA031008 I 0.888
OPUNC08G18020 Oryza punctata OPUNC08G18020 I 0.888
F775_24151 Aegilops tauschii F775_24151 I 0.888
BRADI3G39927 Brachypodium distachyon BRADI3G39927 I 0.888
BGIOSGA028963 Oryza indica BGIOSGA028963 I 0.888
OS08G0506700 Oryza sativa OS08G0506700 D 0.888
Traes_7AS_4FAB72487 Triticum aestivum Traes_7AS_4FAB72487 I 0.888
ORUFI09G15820 Oryza rufipogon ORUFI09G15820 I 0.888
OS09G0487900 Oryza sativa OS09G0487900 I 0.888
OGLUM08G21000 Oryza glumaepatula OGLUM08G21000 I 0.888
GSMUA_Achr7G20490_001 Musa acuminata GSMUA_Achr7G20490_001 I 0.888
OBART08G19860 Oryza barthii OBART08G19860 I 0.888
MLOC_67834 Hordeum vulgare MLOC_67834 I 0.888
OBART09G14660 Oryza barthii OBART09G14660 I 0.888
OLONG_017566 Oryza longistaminata OLONG_017566 I 0.888
OGLUM09G15300 Oryza glumaepatula OGLUM09G15300 I 0.888
ONIVA08G22410 Oryza nivara ONIVA08G22410 I 0.888
OMERI09G11370 Oryza meridionalis OMERI09G11370 I 0.888
OMERI08G16700 Oryza meridionalis OMERI08G16700 I 0.888
OB08G26810 Oryza brachyantha OB08G26810 I 0.888
ONIVA08G17500 Oryza nivara ONIVA08G17500 I 0.888
GSMUA_Achr6G21220_001 Musa acuminata GSMUA_Achr6G21220_001 I 0.886
Pavir.Aa01423 Panicum virgatum Pavir.Aa01423 I 0.886
PDK_20s1484071g001 Phoenix dactylifera PDK_20s1484071g001 I 0.884
PDK_20s1630671g001 Phoenix dactylifera PDK_20s1630671g001 I 0.884
Cla015469 Citrullus lanatus Cla015469 I 0.884
TCM_005925 Theobroma cacao TCM_005925 I 0.880
cassava35513.valid.m1 Manihot esculenta cassava35513.valid.m1 I 0.880
30149.m000231 Ricinus communis 30149.m000231 I 0.880
Gorai.004G035800 Gossypium raimondii Gorai.004G035800 I 0.880
Gorai.011G144600 Gossypium raimondii Gorai.011G144600 I 0.877
Solyc09g098110.2 Solanum lycopersicum Solyc09g098110.2 I 0.877
Carubv10023683m.g Capsella rubella Carubv10023683m.g I 0.877
VIT_05s0124g00240 Vitis vinifera VIT_05s0124g00240 I 0.877
Bo4g019620 Brassica oleracea Bo4g019620 I 0.877
Pm007619 Prunus mume Pm007619 I 0.877
Cagra.3706s0004 Capsella grandiflora Cagra.3706s0004 I 0.877
fgenesh2_kg.4__2475__AT2G43140.1 Arabidopsis lyrata fgenesh2_kg.4__2475__AT2G43140.1 I 0.877
TCM_020066 Theobroma cacao TCM_020066 I 0.877
Bostr.25993s0461 Boechera stricta Bostr.25993s0461 I 0.877
chr5.LjT42F22.20.nc Lotus japonicus chr5.LjT42F22.20.nc I 0.877
Aquca_058_00134 Aquilegia coerulea Aquca_058_00134 I 0.877
MDP0000273574 Malus domestica MDP0000273574 I 0.877
GLYMA20G39220 Glycine max GLYMA20G39220 I 0.877
AT2G43140 Arabidopsis thaliana AT2G43140 I 0.877
mgf005043m Mimulus guttatus mgf005043m I 0.877
PGSC0003DMG400006569 Solanum tuberosum PGSC0003DMG400006569 I 0.877
Thhalv10016998m.g Eutrema salsugineum Thhalv10016998m.g I 0.877
Bo3g036400 Brassica oleracea Bo3g036400 I 0.877
PK07850.1 Cannabis sativa PK07850.1 I 0.877
Bra004748 Brassica rapa Bra004748 I 0.877
Bra000291 Brassica rapa Bra000291 I 0.877
PRUPE_ppa025178mg Prunus persica PRUPE_ppa025178mg I 0.877
SapurV1A.0529s0060 Salix purpurea SapurV1A.0529s0060 I 0.877
orange1.1g016638m.g Citrus sinensis orange1.1g016638m.g I 0.875
gene26967-v1.0-hybrid Fragaria vesca gene26967-v1.0-hybrid I 0.875
Ciclev10031622m.g Citrus clementina Ciclev10031622m.g I 0.875
POPTR_0001s27680 Populus trichocarpa POPTR_0001s27680 I 0.873
GLYMA08G16190 Glycine max GLYMA08G16190 I 0.872
SapurV1A.0027s0090 Salix purpurea SapurV1A.0027s0090 I 0.872
Cucsa.050160 Cucumis sativus Cucsa.050160 I 0.872
Eucgr.G03396 Eucalyptus grandis Eucgr.G03396 I 0.869
GLYMA02G29830 Glycine max GLYMA02G29830 I 0.869
Si017194m.g Setaria italica Si017194m.g I 0.867
gw1.185.89.1 Physcomitrella patens gw1.185.89.1 I 0.865
Cagra.2093s0006 Capsella grandiflora Cagra.2093s0006 I 0.864
fgenesh2_kg.1__4183__AT1G51140.1 Arabidopsis lyrata fgenesh2_kg.1__4183__AT1G51140.1 I 0.864
Bostr.26675s0074 Boechera stricta Bostr.26675s0074 I 0.864
orange1.1g015337m.g Citrus sinensis orange1.1g015337m.g I 0.864
Ciclev10015437m.g Citrus clementina Ciclev10015437m.g I 0.864
Eucgr.B03669 Eucalyptus grandis Eucgr.B03669 I 0.864
Bra016886 Brassica rapa Bra016886 I 0.864
GLYMA15G03740 Glycine max GLYMA15G03740 I 0.864
Bo4g191390 Brassica oleracea Bo4g191390 I 0.864
Thhalv10011463m.g Eutrema salsugineum Thhalv10011463m.g I 0.864
PK20089.1 Cannabis sativa PK20089.1 I 0.864
GSMUA_Achr9G27780_001 Musa acuminata GSMUA_Achr9G27780_001 I 0.864
MTR_2g098310 Medicago truncatula MTR_2g098310 I 0.864
Bo6g024810 Brassica oleracea Bo6g024810 I 0.864
BHLH122 Arabidopsis thaliana AT1G51140 D 0.864
Bra018896 Brassica rapa Bra018896 I 0.864
GLYMA13G41670 Glycine max GLYMA13G41670 I 0.864
GLYMA12G05930 Glycine max GLYMA12G05930 I 0.864
GLYMA11G13960 Glycine max GLYMA11G13960 I 0.864
Ca_02662 Cicer arietinum Ca_02662 I 0.864
Ca_14223 Cicer arietinum Ca_14223 I 0.864
TCM_040564 Theobroma cacao TCM_040564 I 0.864
Carubv10009458m.g Capsella rubella Carubv10009458m.g I 0.864
Gorai.009G071900 Gossypium raimondii Gorai.009G071900 I 0.864
chr1.CM0318.250.nd Lotus japonicus chr1.CM0318.250.nd I 0.862
Pm016406 Prunus mume Pm016406 I 0.862
PRUPE_ppa006134mg Prunus persica PRUPE_ppa006134mg I 0.862
Ca_26916 Cicer arietinum Ca_26916 I 0.860
mgf018372m Mimulus guttatus mgf018372m N 0.860
GLYMA15G42680 Glycine max GLYMA15G42680 I 0.860
cassava36544.valid.m1 Manihot esculenta cassava36544.valid.m1 I 0.856
SapurV1A.0402s0180 Salix purpurea SapurV1A.0402s0180 I 0.855
SapurV1A.0071s0010 Salix purpurea SapurV1A.0071s0010 I 0.855
e_gw1.34.393.1 Physcomitrella patens e_gw1.34.393.1 I 0.854
Eucgr.J00796 Eucalyptus grandis Eucgr.J00796 I 0.852
GLYMA12G36750 Glycine max GLYMA12G36750 I 0.852
GLYMA13G27455 Glycine max GLYMA13G27455 I 0.852
Si029614m.g Setaria italica Si029614m.g I 0.852
GRMZM2G417597 Zea mays GRMZM2G417597 I 0.852
Sb02g028300 Sorghum bicolor Sb02g028300 I 0.852
GRMZM2G085467 Zea mays GRMZM2G085467 I 0.852
MTR_3g028520 Medicago truncatula MTR_3g028520 I 0.852
MTR_3g027650 Medicago truncatula MTR_3g027650 I 0.852
Pavir.Ba01718 Panicum virgatum Pavir.Ba01718 I 0.852
GSMUA_Achr3G11110_001 Musa acuminata GSMUA_Achr3G11110_001 I 0.852
Pavir.J14004 Panicum virgatum Pavir.J14004 I 0.852
Pavir.J00377 Panicum virgatum Pavir.J00377 I 0.852
evm.TU.contig_45766 Carica papaya evm.TU.contig_45766 I 0.850
GLYMA19G32600 Glycine max GLYMA19G32600 I 0.849
PK06301.1 Cannabis sativa PK06301.1 I 0.846
Thhalv10028883m.g Eutrema salsugineum Thhalv10028883m.g I 0.846
SapurV1A.0391s0050 Salix purpurea SapurV1A.0391s0050 I 0.846
Gorai.013G138300 Gossypium raimondii Gorai.013G138300 I 0.846
orange1.1g023215m.g Citrus sinensis orange1.1g023215m.g I 0.846
BHLH81 Arabidopsis thaliana AT4G09180 I 0.846
MDP0000269890 Malus domestica MDP0000269890 I 0.846
SapurV1A.0690s0120 Salix purpurea SapurV1A.0690s0120 I 0.846
SapurV1A.1647s0020 Salix purpurea SapurV1A.1647s0020 I 0.846
fgenesh2_kg.6__2924__AT4G09180.1 Arabidopsis lyrata fgenesh2_kg.6__2924__AT4G09180.1 I 0.846
cassava13743.valid.m1 Manihot esculenta cassava13743.valid.m1 I 0.846
PRUPE_ppa011017mg Prunus persica PRUPE_ppa011017mg I 0.846
Cucsa.061590 Cucumis sativus Cucsa.061590 I 0.846
PGSC0003DMG400031314 Solanum tuberosum PGSC0003DMG400031314 I 0.846
Solyc06g065040.2 Solanum lycopersicum Solyc06g065040.2 I 0.846
mgf002701m Mimulus guttatus mgf002701m I 0.846
Pm004181 Prunus mume Pm004181 I 0.846
GLYMA08G26110 Glycine max GLYMA08G26110 I 0.846
TCM_036484 Theobroma cacao TCM_036484 I 0.846
BHLH80 Arabidopsis thaliana AT1G35460 D 0.846
scaffold_103992.1 Arabidopsis lyrata scaffold_103992.1 I 0.846
gene26880-v1.0-hybrid Fragaria vesca gene26880-v1.0-hybrid I 0.846
VIT_18s0041g00690 Vitis vinifera VIT_18s0041g00690 I 0.846
Bra028088 Brassica rapa Bra028088 I 0.846
Bra036760 Brassica rapa Bra036760 I 0.846
Carubv10010050m.g Capsella rubella Carubv10010050m.g I 0.846
Ciclev10002083m.g Citrus clementina Ciclev10002083m.g I 0.846
Bo8g026850 Brassica oleracea Bo8g026850 I 0.846
Bo6g043840 Brassica oleracea Bo6g043840 I 0.846
Cagra.9781s0002 Capsella grandiflora Cagra.9781s0002 I 0.846
Carubv10001721m.g Capsella rubella Carubv10001721m.g I 0.846
Bostr.1774s0027 Boechera stricta Bostr.1774s0027 I 0.846
Bostr.25463s0393 Boechera stricta Bostr.25463s0393 I 0.846
Cagra.18223s0002 Capsella grandiflora Cagra.18223s0002 I 0.846
PGSC0003DMG400023852 Solanum tuberosum PGSC0003DMG400023852 I 0.843
PDK_20s1302565g001 Phoenix dactylifera PDK_20s1302565g001 I 0.843
Solyc12g100140.1 Solanum lycopersicum Solyc12g100140.1 I 0.843
POPTR_0003s22290 Populus trichocarpa POPTR_0003s22290 I 0.841
scaffold_403077.1 Arabidopsis lyrata scaffold_403077.1 I 0.841
AT2G42280 Arabidopsis thaliana AT2G42280 D 0.841
chr3.LjT46L11.40.nc Lotus japonicus chr3.LjT46L11.40.nc N 0.841
VIT_06s0004g01740 Vitis vinifera VIT_06s0004g01740 I 0.841
Cagra.2636s0012 Capsella grandiflora Cagra.2636s0012 I 0.841
Carubv10023498m.g Capsella rubella Carubv10023498m.g I 0.841
MDP0000307685 Malus domestica MDP0000307685 I 0.841
30169.m006403 Ricinus communis 30169.m006403 I 0.841
SapurV1A.0009s0400 Salix purpurea SapurV1A.0009s0400 I 0.841
OBART04G16900 Oryza barthii OBART04G16900 I 0.839
OGLUM04G16920 Oryza glumaepatula OGLUM04G16920 I 0.839
Bo4g194080 Brassica oleracea Bo4g194080 N 0.839
MLOC_12058 Hordeum vulgare MLOC_12058 I 0.839
OMERI04G14260 Oryza meridionalis OMERI04G14260 I 0.839
OB04G24170 Oryza brachyantha OB04G24170 I 0.839
LPERR04G13560 Leersia perrieri LPERR04G13560 I 0.839
OPUNC04G14700 Oryza punctata OPUNC04G14700 I 0.839
Bra037732 Brassica rapa Bra037732 N 0.839
BRADI3G48070 Brachypodium distachyon BRADI3G48070 I 0.839
OS04G0489600 Oryza sativa OS04G0489600 I 0.839
ORUFI04G18350 Oryza rufipogon ORUFI04G18350 I 0.839
BGIOSGA016651 Oryza indica BGIOSGA016651 I 0.839
ORGLA04G0140000 Oryza glaberrima ORGLA04G0140000 I 0.839
ONIVA04G15000 Oryza nivara ONIVA04G15000 I 0.839