CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Si017194m.g
(
Setaria italica
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
Si017194m.g
T044742_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
OS08G0506700
M01755_2.00
Oryza sativa
NCCACTTGN
NCAAGTGGN
PBM
Weirauch et al.(2014)
pTH8547
0.857
0.843
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Si017194m
bHLH
379
429
ATHPRSIAERERRTRISEKLRKLQELVPHMDKQTSTADMLDLAVEHIKGLQ
Links
Other
bHLH
family TFs
Other
Setaria italica
TFs
136 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GLYMA02G29830
Glycine max
GLYMA02G29830
I
0.887
OBART02G23210
Oryza barthii
OBART02G23210
I
0.884
Pavir.Ga01365
Panicum virgatum
Pavir.Ga01365
I
0.884
Pavir.Gb01377
Panicum virgatum
Pavir.Gb01377
I
0.884
OB02G30670
Oryza brachyantha
OB02G30670
I
0.884
LPERR02G18900
Leersia perrieri
LPERR02G18900
I
0.884
Pavir.J08536
Panicum virgatum
Pavir.J08536
I
0.884
Sb04g025260
Sorghum bicolor
Sb04g025260
I
0.884
OLONG_009256
Oryza longistaminata
OLONG_009256
I
0.884
ORUFI02G24640
Oryza rufipogon
ORUFI02G24640
I
0.884
Si010513m.g
Setaria italica
Si010513m.g
I
0.884
Sb06g020810
Sorghum bicolor
Sb06g020810
I
0.884
ORGLA02G0200100
Oryza glaberrima
ORGLA02G0200100
I
0.884
OPUNC02G21170
Oryza punctata
OPUNC02G21170
I
0.884
OMERI02G22740
Oryza meridionalis
OMERI02G22740
I
0.884
ONIVA02G26110
Oryza nivara
ONIVA02G26110
I
0.884
GRMZM2G437481
Zea mays
GRMZM2G437481
I
0.884
Pavir.Ab02229
Panicum virgatum
Pavir.Ab02229
I
0.884
BGIOSGA008576
Oryza indica
BGIOSGA008576
I
0.884
GSMUA_Achr6G21220_001
Musa acuminata
GSMUA_Achr6G21220_001
I
0.873
Pavir.Aa01423
Panicum virgatum
Pavir.Aa01423
I
0.873
PDK_20s1484071g001
Phoenix dactylifera
PDK_20s1484071g001
I
0.872
PDK_20s1630671g001
Phoenix dactylifera
PDK_20s1630671g001
I
0.872
evm.TU.supercontig_85.115
Carica papaya
evm.TU.supercontig_85.115
I
0.869
GLYMA08G16190
Glycine max
GLYMA08G16190
I
0.867
Cucsa.050160
Cucumis sativus
Cucsa.050160
I
0.867
Cla015469
Citrullus lanatus
Cla015469
I
0.867
SapurV1A.1898s0040
Salix purpurea
SapurV1A.1898s0040
I
0.867
SapurV1A.0111s0030
Salix purpurea
SapurV1A.0111s0030
I
0.867
AT2G43140
Arabidopsis thaliana
AT2G43140
I
0.864
Solyc09g098110.2
Solanum lycopersicum
Solyc09g098110.2
I
0.864
Bo3g036400
Brassica oleracea
Bo3g036400
I
0.864
TCM_020066
Theobroma cacao
TCM_020066
I
0.864
Bostr.25993s0461
Boechera stricta
Bostr.25993s0461
I
0.864
mgf005043m
Mimulus guttatus
mgf005043m
I
0.864
PRUPE_ppa025178mg
Prunus persica
PRUPE_ppa025178mg
I
0.864
Aquca_058_00134
Aquilegia coerulea
Aquca_058_00134
I
0.864
Gorai.011G144600
Gossypium raimondii
Gorai.011G144600
I
0.864
Carubv10023683m.g
Capsella rubella
Carubv10023683m.g
I
0.864
Cagra.3706s0004
Capsella grandiflora
Cagra.3706s0004
I
0.864
PGSC0003DMG400006569
Solanum tuberosum
PGSC0003DMG400006569
I
0.864
Pm007619
Prunus mume
Pm007619
I
0.864
chr5.LjT42F22.20.nc
Lotus japonicus
chr5.LjT42F22.20.nc
I
0.864
Bo4g019620
Brassica oleracea
Bo4g019620
I
0.864
fgenesh2_kg.4__2475__AT2G43140.1
Arabidopsis lyrata
fgenesh2_kg.4__2475__AT2G43140.1
I
0.864
PK07850.1
Cannabis sativa
PK07850.1
I
0.864
SapurV1A.0529s0060
Salix purpurea
SapurV1A.0529s0060
I
0.864
Thhalv10016998m.g
Eutrema salsugineum
Thhalv10016998m.g
I
0.864
Bra004748
Brassica rapa
Bra004748
I
0.864
MDP0000273574
Malus domestica
MDP0000273574
I
0.864
GLYMA20G39220
Glycine max
GLYMA20G39220
I
0.864
Bra000291
Brassica rapa
Bra000291
I
0.864
VIT_05s0124g00240
Vitis vinifera
VIT_05s0124g00240
I
0.864
cassava35513.valid.m1
Manihot esculenta
cassava35513.valid.m1
I
0.861
30149.m000231
Ricinus communis
30149.m000231
I
0.861
cassava35967.valid.m1
Manihot esculenta
cassava35967.valid.m1
I
0.857
cassava44054.valid.m1
Manihot esculenta
cassava44054.valid.m1
I
0.857
29216.m000261
Ricinus communis
29216.m000261
I
0.857
cassava2126.valid.m1
Manihot esculenta
cassava2126.valid.m1
I
0.857
cassava30692.valid.m1
Manihot esculenta
cassava30692.valid.m1
I
0.857
Pm025821
Prunus mume
Pm025821
I
0.857
Cucsa.242910
Cucumis sativus
Cucsa.242910
I
0.857
Lus10031255.g
Linum usitatissimum
Lus10031255.g
I
0.857
orange1.1g018007m.g
Citrus sinensis
orange1.1g018007m.g
I
0.857
MDP0000180376
Malus domestica
MDP0000180376
I
0.857
Lus10031826.g
Linum usitatissimum
Lus10031826.g
I
0.857
SapurV1A.0018s0320
Salix purpurea
SapurV1A.0018s0320
I
0.857
SapurV1A.0133s0050
Salix purpurea
SapurV1A.0133s0050
I
0.857
PDK_20s1391471g001
Phoenix dactylifera
PDK_20s1391471g001
I
0.857
PK18038.1
Cannabis sativa
PK18038.1
I
0.857
Lus10021023.g
Linum usitatissimum
Lus10021023.g
I
0.857
Gorai.006G140200
Gossypium raimondii
Gorai.006G140200
I
0.857
Eucgr.A02417
Eucalyptus grandis
Eucgr.A02417
I
0.857
Ciclev10005233m.g
Citrus clementina
Ciclev10005233m.g
I
0.857
Aquca_009_00280
Aquilegia coerulea
Aquca_009_00280
I
0.857
evm.TU.supercontig_84.89
Carica papaya
evm.TU.supercontig_84.89
I
0.857
gene00545-v1.0-hybrid
Fragaria vesca
gene00545-v1.0-hybrid
I
0.857
Gorai.002G228900
Gossypium raimondii
Gorai.002G228900
I
0.857
gene20622-v1.0-hybrid
Fragaria vesca
gene20622-v1.0-hybrid
I
0.857
mgf016734m
Mimulus guttatus
mgf016734m
I
0.857
Solyc10g079050.1
Solanum lycopersicum
Solyc10g079050.1
I
0.857
ONIVA08G17500
Oryza nivara
ONIVA08G17500
I
0.857
OMERI09G11370
Oryza meridionalis
OMERI09G11370
I
0.857
OMERI08G16700
Oryza meridionalis
OMERI08G16700
I
0.857
OLONG_017566
Oryza longistaminata
OLONG_017566
I
0.857
ONIVA08G22410
Oryza nivara
ONIVA08G22410
I
0.857
OPUNC08G18020
Oryza punctata
OPUNC08G18020
I
0.857
ORUFI08G22260
Oryza rufipogon
ORUFI08G22260
I
0.857
ORGLA09G0112900
Oryza glaberrima
ORGLA09G0112900
I
0.857
ORGLA08G0174800
Oryza glaberrima
ORGLA08G0174800
I
0.857
Pm000447
Prunus mume
Pm000447
I
0.857
OGLUM09G15300
Oryza glumaepatula
OGLUM09G15300
I
0.857
OGLUM08G21000
Oryza glumaepatula
OGLUM08G21000
I
0.857
F775_24151
Aegilops tauschii
F775_24151
I
0.857
BRADI3G39927
Brachypodium distachyon
BRADI3G39927
I
0.857
BGIOSGA031008
Oryza indica
BGIOSGA031008
I
0.857
BGIOSGA028963
Oryza indica
BGIOSGA028963
I
0.857
GLYMA10G12150
Glycine max
GLYMA10G12150
I
0.857
GSMUA_Achr5G22310_001
Musa acuminata
GSMUA_Achr5G22310_001
I
0.857
OBART09G14660
Oryza barthii
OBART09G14660
I
0.857
OBART08G19860
Oryza barthii
OBART08G19860
I
0.857
OB08G26810
Oryza brachyantha
OB08G26810
I
0.857
MLOC_67834
Hordeum vulgare
MLOC_67834
I
0.857
ORUFI09G15820
Oryza rufipogon
ORUFI09G15820
I
0.857
OPUNC09G13060
Oryza punctata
OPUNC09G13060
I
0.857
Traes_7DS_B671A4EAD
Triticum aestivum
Traes_7DS_B671A4EAD
I
0.857
Traes_7AS_4FAB72487
Triticum aestivum
Traes_7AS_4FAB72487
I
0.857
PRUPE_ppa019977mg
Prunus persica
PRUPE_ppa019977mg
I
0.857
OS08G0506700
Oryza sativa
OS08G0506700
D
0.857
Cla017792
Citrullus lanatus
Cla017792
I
0.857
VIT_08s0007g07810
Vitis vinifera
VIT_08s0007g07810
I
0.857
TRIUR3_26625
Triticum urartu
TRIUR3_26625
I
0.857
PRUPE_ppa006295mg
Prunus persica
PRUPE_ppa006295mg
I
0.857
TCM_024842
Theobroma cacao
TCM_024842
I
0.857
POPTR_0006s05640
Populus trichocarpa
POPTR_0006s05640
I
0.857
PGSC0003DMG400008153
Solanum tuberosum
PGSC0003DMG400008153
I
0.857
OS09G0487900
Oryza sativa
OS09G0487900
I
0.857
POPTR_0016s05100
Populus trichocarpa
POPTR_0016s05100
I
0.857
POPTR_0001s27680
Populus trichocarpa
POPTR_0001s27680
I
0.855
30152.m002405
Ricinus communis
30152.m002405
I
0.854
VIT_13s0064g01290
Vitis vinifera
VIT_13s0064g01290
I
0.854
cassava29651.valid.m1
Manihot esculenta
cassava29651.valid.m1
I
0.854
GLYMA15G42680
Glycine max
GLYMA15G42680
I
0.854
PGSC0003DMG400025263
Solanum tuberosum
PGSC0003DMG400025263
I
0.854
POPTR_0009s06910
Populus trichocarpa
POPTR_0009s06910
I
0.854
Ca_26916
Cicer arietinum
Ca_26916
I
0.854
SapurV1A.0027s0090
Salix purpurea
SapurV1A.0027s0090
I
0.854
Solyc01g086870.2
Solanum lycopersicum
Solyc01g086870.2
I
0.854
mgf018372m
Mimulus guttatus
mgf018372m
N
0.849
GLYMA12G36750
Glycine max
GLYMA12G36750
I
0.846
MTR_3g028520
Medicago truncatula
MTR_3g028520
I
0.846
MTR_3g027650
Medicago truncatula
MTR_3g027650
I
0.846
GLYMA13G27455
Glycine max
GLYMA13G27455
I
0.846
GSMUA_Achr7G20490_001
Musa acuminata
GSMUA_Achr7G20490_001
I
0.845
SapurV1A.0402s0180
Salix purpurea
SapurV1A.0402s0180
I
0.842
SapurV1A.0071s0010
Salix purpurea
SapurV1A.0071s0010
I
0.842