Cucsa.050160 (Cucumis sativus)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Cucsa.050160 T048133_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
OS08G0506700
M01755_2.00 		Oryza sativa
NCCACTTGN
NCAAGTGGN		 PBM
Weirauch et al.(2014)
pTH8547 		0.869 0.843
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cucsa.050160.1 bHLH 349 399
Cucsa.050160.2 bHLH 350 400
Cucsa.050160.3 bHLH 350 400
Cucsa.050160.4 bHLH 349 399
Cucsa.050160.5 bHLH 350 399
Cucsa.050160.6 bHLH 349 399
Cucsa.050160.7 bHLH 349 399
Cucsa.050160.8 bHLH 349 398

Links

Other bHLH family TFs
Other Cucumis sativus TFs

141 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cla015469 Citrullus lanatus Cla015469 I 0.902
POPTR_0001s27680 Populus trichocarpa POPTR_0001s27680 I 0.891
SapurV1A.0027s0090 Salix purpurea SapurV1A.0027s0090 I 0.890
GLYMA08G16190 Glycine max GLYMA08G16190 I 0.884
Ca_26916 Cicer arietinum Ca_26916 I 0.872
SapurV1A.0111s0030 Salix purpurea SapurV1A.0111s0030 I 0.872
SapurV1A.1898s0040 Salix purpurea SapurV1A.1898s0040 I 0.872
GLYMA15G42680 Glycine max GLYMA15G42680 I 0.871
evm.TU.supercontig_85.115 Carica papaya evm.TU.supercontig_85.115 I 0.870
OMERI09G11370 Oryza meridionalis OMERI09G11370 I 0.869
ONIVA08G17500 Oryza nivara ONIVA08G17500 I 0.869
OPUNC08G18020 Oryza punctata OPUNC08G18020 I 0.869
OMERI08G16700 Oryza meridionalis OMERI08G16700 I 0.869
OLONG_017566 Oryza longistaminata OLONG_017566 I 0.869
OBART09G14660 Oryza barthii OBART09G14660 I 0.869
OGLUM08G21000 Oryza glumaepatula OGLUM08G21000 I 0.869
OGLUM09G15300 Oryza glumaepatula OGLUM09G15300 I 0.869
OPUNC09G13060 Oryza punctata OPUNC09G13060 I 0.869
ORGLA08G0174800 Oryza glaberrima ORGLA08G0174800 I 0.869
Traes_7DS_B671A4EAD Triticum aestivum Traes_7DS_B671A4EAD I 0.869
Traes_7AS_4FAB72487 Triticum aestivum Traes_7AS_4FAB72487 I 0.869
OS08G0506700 Oryza sativa OS08G0506700 D 0.869
OBART08G19860 Oryza barthii OBART08G19860 I 0.869
ORUFI09G15820 Oryza rufipogon ORUFI09G15820 I 0.869
ORGLA09G0112900 Oryza glaberrima ORGLA09G0112900 I 0.869
TRIUR3_26625 Triticum urartu TRIUR3_26625 I 0.869
ORUFI08G22260 Oryza rufipogon ORUFI08G22260 I 0.869
OS09G0487900 Oryza sativa OS09G0487900 I 0.869
ONIVA08G22410 Oryza nivara ONIVA08G22410 I 0.869
F775_24151 Aegilops tauschii F775_24151 I 0.869
BGIOSGA031008 Oryza indica BGIOSGA031008 I 0.869
BGIOSGA028963 Oryza indica BGIOSGA028963 I 0.869
MLOC_67834 Hordeum vulgare MLOC_67834 I 0.869
BRADI3G39927 Brachypodium distachyon BRADI3G39927 I 0.869
OB08G26810 Oryza brachyantha OB08G26810 I 0.869
Si010513m.g Setaria italica Si010513m.g I 0.867
Si017194m.g Setaria italica Si017194m.g I 0.867
ORUFI02G24640 Oryza rufipogon ORUFI02G24640 I 0.867
OMERI02G22740 Oryza meridionalis OMERI02G22740 I 0.867
Pavir.Gb01377 Panicum virgatum Pavir.Gb01377 I 0.867
Sb06g020810 Sorghum bicolor Sb06g020810 I 0.867
Sb04g025260 Sorghum bicolor Sb04g025260 I 0.867
OB02G30670 Oryza brachyantha OB02G30670 I 0.867
OBART02G23210 Oryza barthii OBART02G23210 I 0.867
GRMZM2G437481 Zea mays GRMZM2G437481 I 0.867
Pavir.Ab02229 Panicum virgatum Pavir.Ab02229 I 0.867
ORGLA02G0200100 Oryza glaberrima ORGLA02G0200100 I 0.867
Pavir.J08536 Panicum virgatum Pavir.J08536 I 0.867
Pavir.Ga01365 Panicum virgatum Pavir.Ga01365 I 0.867
OPUNC02G21170 Oryza punctata OPUNC02G21170 I 0.867
LPERR02G18900 Leersia perrieri LPERR02G18900 I 0.867
BGIOSGA008576 Oryza indica BGIOSGA008576 I 0.867
OLONG_009256 Oryza longistaminata OLONG_009256 I 0.867
ONIVA02G26110 Oryza nivara ONIVA02G26110 I 0.867
MTR_3g027650 Medicago truncatula MTR_3g027650 I 0.864
MTR_3g028520 Medicago truncatula MTR_3g028520 I 0.864
GLYMA13G27455 Glycine max GLYMA13G27455 I 0.864
GLYMA12G36750 Glycine max GLYMA12G36750 I 0.864
Solyc01g086870.2 Solanum lycopersicum Solyc01g086870.2 I 0.860
cassava29651.valid.m1 Manihot esculenta cassava29651.valid.m1 I 0.860
VIT_13s0064g01290 Vitis vinifera VIT_13s0064g01290 I 0.860
PGSC0003DMG400025263 Solanum tuberosum PGSC0003DMG400025263 I 0.860
POPTR_0009s06910 Populus trichocarpa POPTR_0009s06910 I 0.860
30152.m002405 Ricinus communis 30152.m002405 I 0.860
cassava30692.valid.m1 Manihot esculenta cassava30692.valid.m1 I 0.857
cassava2126.valid.m1 Manihot esculenta cassava2126.valid.m1 I 0.857
cassava35967.valid.m1 Manihot esculenta cassava35967.valid.m1 I 0.857
Lus10031826.g Linum usitatissimum Lus10031826.g I 0.857
Lus10021023.g Linum usitatissimum Lus10021023.g I 0.857
mgf016734m Mimulus guttatus mgf016734m I 0.857
Eucgr.A02417 Eucalyptus grandis Eucgr.A02417 I 0.857
evm.TU.supercontig_84.89 Carica papaya evm.TU.supercontig_84.89 I 0.857
Ciclev10005233m.g Citrus clementina Ciclev10005233m.g I 0.857
29216.m000261 Ricinus communis 29216.m000261 I 0.857
MDP0000180376 Malus domestica MDP0000180376 I 0.857
gene00545-v1.0-hybrid Fragaria vesca gene00545-v1.0-hybrid I 0.857
gene20622-v1.0-hybrid Fragaria vesca gene20622-v1.0-hybrid I 0.857
Gorai.002G228900 Gossypium raimondii Gorai.002G228900 I 0.857
Gorai.006G140200 Gossypium raimondii Gorai.006G140200 I 0.857
Cucsa.242910 Cucumis sativus Cucsa.242910 I 0.857
Aquca_009_00280 Aquilegia coerulea Aquca_009_00280 I 0.857
orange1.1g018007m.g Citrus sinensis orange1.1g018007m.g I 0.857
cassava44054.valid.m1 Manihot esculenta cassava44054.valid.m1 I 0.857
POPTR_0006s05640 Populus trichocarpa POPTR_0006s05640 I 0.857
GLYMA10G12150 Glycine max GLYMA10G12150 I 0.857
POPTR_0016s05100 Populus trichocarpa POPTR_0016s05100 I 0.857
PRUPE_ppa006295mg Prunus persica PRUPE_ppa006295mg I 0.857
Lus10031255.g Linum usitatissimum Lus10031255.g I 0.857
Pm025821 Prunus mume Pm025821 I 0.857
SapurV1A.0133s0050 Salix purpurea SapurV1A.0133s0050 I 0.857
GSMUA_Achr5G22310_001 Musa acuminata GSMUA_Achr5G22310_001 I 0.857
PGSC0003DMG400008153 Solanum tuberosum PGSC0003DMG400008153 I 0.857
PRUPE_ppa019977mg Prunus persica PRUPE_ppa019977mg I 0.857
PDK_20s1391471g001 Phoenix dactylifera PDK_20s1391471g001 I 0.857
Cla017792 Citrullus lanatus Cla017792 I 0.857
Pm000447 Prunus mume Pm000447 I 0.857
PK18038.1 Cannabis sativa PK18038.1 I 0.857
VIT_08s0007g07810 Vitis vinifera VIT_08s0007g07810 I 0.857
TCM_024842 Theobroma cacao TCM_024842 I 0.857
Solyc10g079050.1 Solanum lycopersicum Solyc10g079050.1 I 0.857
SapurV1A.0018s0320 Salix purpurea SapurV1A.0018s0320 I 0.857
GLYMA02G29830 Glycine max GLYMA02G29830 I 0.857
GSMUA_Achr6G21220_001 Musa acuminata GSMUA_Achr6G21220_001 I 0.855
Pavir.Aa01423 Panicum virgatum Pavir.Aa01423 I 0.855
PDK_20s1484071g001 Phoenix dactylifera PDK_20s1484071g001 I 0.854
PDK_20s1630671g001 Phoenix dactylifera PDK_20s1630671g001 I 0.854
chr3.LjT46L11.40.nc Lotus japonicus chr3.LjT46L11.40.nc N 0.852
cassava35513.valid.m1 Manihot esculenta cassava35513.valid.m1 I 0.850
30149.m000231 Ricinus communis 30149.m000231 I 0.850
mgf018372m Mimulus guttatus mgf018372m N 0.848
chr5.LjT42F22.20.nc Lotus japonicus chr5.LjT42F22.20.nc I 0.846
Thhalv10016998m.g Eutrema salsugineum Thhalv10016998m.g I 0.846
SapurV1A.0529s0060 Salix purpurea SapurV1A.0529s0060 I 0.846
MDP0000273574 Malus domestica MDP0000273574 I 0.846
PK07850.1 Cannabis sativa PK07850.1 I 0.846
Solyc09g098110.2 Solanum lycopersicum Solyc09g098110.2 I 0.846
GLYMA20G39220 Glycine max GLYMA20G39220 I 0.846
GSMUA_Achr7G20490_001 Musa acuminata GSMUA_Achr7G20490_001 I 0.846
PGSC0003DMG400006569 Solanum tuberosum PGSC0003DMG400006569 I 0.846
fgenesh2_kg.4__2475__AT2G43140.1 Arabidopsis lyrata fgenesh2_kg.4__2475__AT2G43140.1 I 0.846
Bra004748 Brassica rapa Bra004748 I 0.846
Bo3g036400 Brassica oleracea Bo3g036400 I 0.846
Bo4g019620 Brassica oleracea Bo4g019620 I 0.846
Bra000291 Brassica rapa Bra000291 I 0.846
Gorai.011G144600 Gossypium raimondii Gorai.011G144600 I 0.846
PRUPE_ppa025178mg Prunus persica PRUPE_ppa025178mg I 0.846
Aquca_058_00134 Aquilegia coerulea Aquca_058_00134 I 0.846
Bostr.25993s0461 Boechera stricta Bostr.25993s0461 I 0.846
Cagra.3706s0004 Capsella grandiflora Cagra.3706s0004 I 0.846
Carubv10023683m.g Capsella rubella Carubv10023683m.g I 0.846
AT2G43140 Arabidopsis thaliana AT2G43140 I 0.846
mgf005043m Mimulus guttatus mgf005043m I 0.846
TCM_020066 Theobroma cacao TCM_020066 I 0.846
Pm007619 Prunus mume Pm007619 I 0.846
VIT_05s0124g00240 Vitis vinifera VIT_05s0124g00240 I 0.846
chr1.CM0318.250.nd Lotus japonicus chr1.CM0318.250.nd I 0.844
GLYMA03G29750 Glycine max GLYMA03G29750 N 0.844
TCM_005925 Theobroma cacao TCM_005925 I 0.838
evm.TU.contig_45766 Carica papaya evm.TU.contig_45766 I 0.838
Gorai.004G035800 Gossypium raimondii Gorai.004G035800 I 0.838