CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Aquca_058_00134
(
Aquilegia coerulea
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
Aquca_058_00134
T049029_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
OS08G0506700
M01755_2.00
Oryza sativa
NCCACTTGN
NCAAGTGGN
PBM
Weirauch et al.(2014)
pTH8547
0.866
0.837
BHLH80
M06722_2.00
Arabidopsis thaliana
DNCMACTTGCH
DGCAAGTKGNH
Dap-seq
OMalley et al.(2016)
bHLH80_col_a
0.865
0.776
BHLH80
M06723_2.00
Arabidopsis thaliana
DKCMACTTGCA
TGCAAGTKGMH
Dap-seq
OMalley et al.(2016)
bHLH80_colamp_a
0.865
0.776
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Aquca_058_00134.1
bHLH
295
343
HPRSIAERERRTRISDKLRKLQELVPNMDKQTSTADMLDLAVQHIKGLQ
Links
Other
bHLH
family TFs
Other
Aquilegia coerulea
TFs
178 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GLYMA20G39220
Glycine max
GLYMA20G39220
I
0.894
GRMZM2G437481
Zea mays
GRMZM2G437481
I
0.894
Sb06g020810
Sorghum bicolor
Sb06g020810
I
0.894
Pm007619
Prunus mume
Pm007619
I
0.894
ONIVA02G26110
Oryza nivara
ONIVA02G26110
I
0.894
SapurV1A.0529s0060
Salix purpurea
SapurV1A.0529s0060
I
0.894
Si010513m.g
Setaria italica
Si010513m.g
I
0.894
Pavir.Ga01365
Panicum virgatum
Pavir.Ga01365
I
0.894
OPUNC02G21170
Oryza punctata
OPUNC02G21170
I
0.894
Sb04g025260
Sorghum bicolor
Sb04g025260
I
0.894
LPERR02G18900
Leersia perrieri
LPERR02G18900
I
0.894
OBART02G23210
Oryza barthii
OBART02G23210
I
0.894
Pavir.Gb01377
Panicum virgatum
Pavir.Gb01377
I
0.894
TCM_020066
Theobroma cacao
TCM_020066
I
0.894
MDP0000273574
Malus domestica
MDP0000273574
I
0.894
OB02G30670
Oryza brachyantha
OB02G30670
I
0.894
OMERI02G22740
Oryza meridionalis
OMERI02G22740
I
0.894
Pavir.J08536
Panicum virgatum
Pavir.J08536
I
0.894
PRUPE_ppa025178mg
Prunus persica
PRUPE_ppa025178mg
I
0.894
OLONG_009256
Oryza longistaminata
OLONG_009256
I
0.894
Gorai.011G144600
Gossypium raimondii
Gorai.011G144600
I
0.894
Carubv10023683m.g
Capsella rubella
Carubv10023683m.g
I
0.894
Bo3g036400
Brassica oleracea
Bo3g036400
I
0.894
Bo4g019620
Brassica oleracea
Bo4g019620
I
0.894
Bostr.25993s0461
Boechera stricta
Bostr.25993s0461
I
0.894
Cagra.3706s0004
Capsella grandiflora
Cagra.3706s0004
I
0.894
BGIOSGA008576
Oryza indica
BGIOSGA008576
I
0.894
VIT_05s0124g00240
Vitis vinifera
VIT_05s0124g00240
I
0.894
AT2G43140
Arabidopsis thaliana
AT2G43140
I
0.894
ORUFI02G24640
Oryza rufipogon
ORUFI02G24640
I
0.894
fgenesh2_kg.4__2475__AT2G43140.1
Arabidopsis lyrata
fgenesh2_kg.4__2475__AT2G43140.1
I
0.894
chr5.LjT42F22.20.nc
Lotus japonicus
chr5.LjT42F22.20.nc
I
0.894
ORGLA02G0200100
Oryza glaberrima
ORGLA02G0200100
I
0.894
mgf005043m
Mimulus guttatus
mgf005043m
I
0.894
Pavir.Ab02229
Panicum virgatum
Pavir.Ab02229
I
0.894
Thhalv10016998m.g
Eutrema salsugineum
Thhalv10016998m.g
I
0.894
Solyc09g098110.2
Solanum lycopersicum
Solyc09g098110.2
I
0.894
PGSC0003DMG400006569
Solanum tuberosum
PGSC0003DMG400006569
I
0.894
PK07850.1
Cannabis sativa
PK07850.1
I
0.894
Bra000291
Brassica rapa
Bra000291
I
0.894
Bra004748
Brassica rapa
Bra004748
I
0.894
30149.m000231
Ricinus communis
30149.m000231
I
0.891
cassava35513.valid.m1
Manihot esculenta
cassava35513.valid.m1
I
0.891
GSMUA_Achr6G21220_001
Musa acuminata
GSMUA_Achr6G21220_001
I
0.883
Pavir.Aa01423
Panicum virgatum
Pavir.Aa01423
I
0.883
PDK_20s1484071g001
Phoenix dactylifera
PDK_20s1484071g001
I
0.881
PDK_20s1630671g001
Phoenix dactylifera
PDK_20s1630671g001
I
0.881
evm.TU.supercontig_85.115
Carica papaya
evm.TU.supercontig_85.115
I
0.879
SapurV1A.0111s0030
Salix purpurea
SapurV1A.0111s0030
I
0.877
SapurV1A.1898s0040
Salix purpurea
SapurV1A.1898s0040
I
0.877
SapurV1A.0402s0180
Salix purpurea
SapurV1A.0402s0180
I
0.873
SapurV1A.0071s0010
Salix purpurea
SapurV1A.0071s0010
I
0.873
MTR_3g028520
Medicago truncatula
MTR_3g028520
I
0.867
MTR_3g027650
Medicago truncatula
MTR_3g027650
I
0.867
Traes_7DS_B671A4EAD
Triticum aestivum
Traes_7DS_B671A4EAD
I
0.866
orange1.1g018007m.g
Citrus sinensis
orange1.1g018007m.g
I
0.866
Lus10031255.g
Linum usitatissimum
Lus10031255.g
I
0.866
TCM_024842
Theobroma cacao
TCM_024842
I
0.866
MDP0000180376
Malus domestica
MDP0000180376
I
0.866
Lus10031826.g
Linum usitatissimum
Lus10031826.g
I
0.866
Traes_7AS_4FAB72487
Triticum aestivum
Traes_7AS_4FAB72487
I
0.866
gene20622-v1.0-hybrid
Fragaria vesca
gene20622-v1.0-hybrid
I
0.866
evm.TU.supercontig_84.89
Carica papaya
evm.TU.supercontig_84.89
I
0.866
cassava44054.valid.m1
Manihot esculenta
cassava44054.valid.m1
I
0.866
cassava35967.valid.m1
Manihot esculenta
cassava35967.valid.m1
I
0.866
cassava30692.valid.m1
Manihot esculenta
cassava30692.valid.m1
I
0.866
Cucsa.242910
Cucumis sativus
Cucsa.242910
I
0.866
Eucgr.A02417
Eucalyptus grandis
Eucgr.A02417
I
0.866
Ciclev10005233m.g
Citrus clementina
Ciclev10005233m.g
I
0.866
Aquca_009_00280
Aquilegia coerulea
Aquca_009_00280
I
0.866
mgf016734m
Mimulus guttatus
mgf016734m
I
0.866
gene00545-v1.0-hybrid
Fragaria vesca
gene00545-v1.0-hybrid
I
0.866
cassava2126.valid.m1
Manihot esculenta
cassava2126.valid.m1
I
0.866
Cla017792
Citrullus lanatus
Cla017792
I
0.866
Gorai.006G140200
Gossypium raimondii
Gorai.006G140200
I
0.866
Lus10021023.g
Linum usitatissimum
Lus10021023.g
I
0.866
VIT_08s0007g07810
Vitis vinifera
VIT_08s0007g07810
I
0.866
Pm000447
Prunus mume
Pm000447
I
0.866
Gorai.002G228900
Gossypium raimondii
Gorai.002G228900
I
0.866
Solyc10g079050.1
Solanum lycopersicum
Solyc10g079050.1
I
0.866
29216.m000261
Ricinus communis
29216.m000261
I
0.866
Pm025821
Prunus mume
Pm025821
I
0.866
TRIUR3_26625
Triticum urartu
TRIUR3_26625
I
0.866
PGSC0003DMG400008153
Solanum tuberosum
PGSC0003DMG400008153
I
0.866
OBART08G19860
Oryza barthii
OBART08G19860
I
0.866
OB08G26810
Oryza brachyantha
OB08G26810
I
0.866
SapurV1A.0133s0050
Salix purpurea
SapurV1A.0133s0050
I
0.866
OBART09G14660
Oryza barthii
OBART09G14660
I
0.866
OGLUM08G21000
Oryza glumaepatula
OGLUM08G21000
I
0.866
OMERI09G11370
Oryza meridionalis
OMERI09G11370
I
0.866
OMERI08G16700
Oryza meridionalis
OMERI08G16700
I
0.866
OLONG_017566
Oryza longistaminata
OLONG_017566
I
0.866
MLOC_67834
Hordeum vulgare
MLOC_67834
I
0.866
GSMUA_Achr5G22310_001
Musa acuminata
GSMUA_Achr5G22310_001
I
0.866
PDK_20s1391471g001
Phoenix dactylifera
PDK_20s1391471g001
I
0.866
BGIOSGA031008
Oryza indica
BGIOSGA031008
I
0.866
BGIOSGA028963
Oryza indica
BGIOSGA028963
I
0.866
PK18038.1
Cannabis sativa
PK18038.1
I
0.866
BRADI3G39927
Brachypodium distachyon
BRADI3G39927
I
0.866
GLYMA10G12150
Glycine max
GLYMA10G12150
I
0.866
F775_24151
Aegilops tauschii
F775_24151
I
0.866
ONIVA08G17500
Oryza nivara
ONIVA08G17500
I
0.866
OGLUM09G15300
Oryza glumaepatula
OGLUM09G15300
I
0.866
SapurV1A.0018s0320
Salix purpurea
SapurV1A.0018s0320
I
0.866
ONIVA08G22410
Oryza nivara
ONIVA08G22410
I
0.866
OS08G0506700
Oryza sativa
OS08G0506700
D
0.866
POPTR_0006s05640
Populus trichocarpa
POPTR_0006s05640
I
0.866
POPTR_0016s05100
Populus trichocarpa
POPTR_0016s05100
I
0.866
PRUPE_ppa019977mg
Prunus persica
PRUPE_ppa019977mg
I
0.866
PRUPE_ppa006295mg
Prunus persica
PRUPE_ppa006295mg
I
0.866
ORUFI09G15820
Oryza rufipogon
ORUFI09G15820
I
0.866
OS09G0487900
Oryza sativa
OS09G0487900
I
0.866
OPUNC09G13060
Oryza punctata
OPUNC09G13060
I
0.866
ORUFI08G22260
Oryza rufipogon
ORUFI08G22260
I
0.866
ORGLA08G0174800
Oryza glaberrima
ORGLA08G0174800
I
0.866
OPUNC08G18020
Oryza punctata
OPUNC08G18020
I
0.866
ORGLA09G0112900
Oryza glaberrima
ORGLA09G0112900
I
0.866
MDP0000269890
Malus domestica
MDP0000269890
I
0.865
Ciclev10002083m.g
Citrus clementina
Ciclev10002083m.g
I
0.865
orange1.1g023215m.g
Citrus sinensis
orange1.1g023215m.g
I
0.865
Carubv10010050m.g
Capsella rubella
Carubv10010050m.g
I
0.865
PK06301.1
Cannabis sativa
PK06301.1
I
0.865
Gorai.013G138300
Gossypium raimondii
Gorai.013G138300
I
0.865
Carubv10001721m.g
Capsella rubella
Carubv10001721m.g
I
0.865
SapurV1A.0391s0050
Salix purpurea
SapurV1A.0391s0050
I
0.865
SapurV1A.0690s0120
Salix purpurea
SapurV1A.0690s0120
I
0.865
SapurV1A.1647s0020
Salix purpurea
SapurV1A.1647s0020
I
0.865
gene26880-v1.0-hybrid
Fragaria vesca
gene26880-v1.0-hybrid
I
0.865
Thhalv10028883m.g
Eutrema salsugineum
Thhalv10028883m.g
I
0.865
TCM_036484
Theobroma cacao
TCM_036484
I
0.865
GLYMA08G26110
Glycine max
GLYMA08G26110
I
0.865
fgenesh2_kg.6__2924__AT4G09180.1
Arabidopsis lyrata
fgenesh2_kg.6__2924__AT4G09180.1
I
0.865
VIT_18s0041g00690
Vitis vinifera
VIT_18s0041g00690
I
0.865
Bra036760
Brassica rapa
Bra036760
I
0.865
PGSC0003DMG400031314
Solanum tuberosum
PGSC0003DMG400031314
I
0.865
PRUPE_ppa011017mg
Prunus persica
PRUPE_ppa011017mg
I
0.865
Cagra.9781s0002
Capsella grandiflora
Cagra.9781s0002
I
0.865
Solyc06g065040.2
Solanum lycopersicum
Solyc06g065040.2
I
0.865
scaffold_103992.1
Arabidopsis lyrata
scaffold_103992.1
I
0.865
Bra028088
Brassica rapa
Bra028088
I
0.865
Bo8g026850
Brassica oleracea
Bo8g026850
I
0.865
Cagra.18223s0002
Capsella grandiflora
Cagra.18223s0002
I
0.865
Cucsa.061590
Cucumis sativus
Cucsa.061590
I
0.865
Bostr.25463s0393
Boechera stricta
Bostr.25463s0393
I
0.865
mgf002701m
Mimulus guttatus
mgf002701m
I
0.865
BHLH80
Arabidopsis thaliana
AT1G35460
D
0.865
BHLH81
Arabidopsis thaliana
AT4G09180
I
0.865
Pm004181
Prunus mume
Pm004181
I
0.865
Bo6g043840
Brassica oleracea
Bo6g043840
I
0.865
cassava13743.valid.m1
Manihot esculenta
cassava13743.valid.m1
I
0.865
Bostr.1774s0027
Boechera stricta
Bostr.1774s0027
I
0.865
PGSC0003DMG400025263
Solanum tuberosum
PGSC0003DMG400025263
I
0.864
Si017194m.g
Setaria italica
Si017194m.g
I
0.864
POPTR_0009s06910
Populus trichocarpa
POPTR_0009s06910
I
0.864
Solyc01g086870.2
Solanum lycopersicum
Solyc01g086870.2
I
0.864
cassava29651.valid.m1
Manihot esculenta
cassava29651.valid.m1
I
0.864
VIT_13s0064g01290
Vitis vinifera
VIT_13s0064g01290
I
0.864
30152.m002405
Ricinus communis
30152.m002405
I
0.864
Bra037732
Brassica rapa
Bra037732
N
0.856
F775_26506
Aegilops tauschii
F775_26506
I
0.856
TRIUR3_16394
Triticum urartu
TRIUR3_16394
I
0.856
Bo4g194080
Brassica oleracea
Bo4g194080
N
0.856
Traes_6BL_868408DFC
Triticum aestivum
Traes_6BL_868408DFC
I
0.856
Traes_6AL_9437F730F
Triticum aestivum
Traes_6AL_9437F730F
I
0.856
GSMUA_Achr7G20490_001
Musa acuminata
GSMUA_Achr7G20490_001
I
0.855
AMTR_s00070p00149100
Amborella trichopoda
AMTR_s00070p00149100
I
0.854
Cucsa.050160
Cucumis sativus
Cucsa.050160
I
0.846
Cla015469
Citrullus lanatus
Cla015469
I
0.846
GLYMA08G16190
Glycine max
GLYMA08G16190
I
0.846
GLYMA13G27455
Glycine max
GLYMA13G27455
I
0.846
GLYMA12G36750
Glycine max
GLYMA12G36750
I
0.846
TCM_005925
Theobroma cacao
TCM_005925
I
0.843
Gorai.004G035800
Gossypium raimondii
Gorai.004G035800
I
0.843
PGSC0003DMG400022058
Solanum tuberosum
PGSC0003DMG400022058
I
0.841
chr1.CM0318.250.nd
Lotus japonicus
chr1.CM0318.250.nd
I
0.841
Ca_07284
Cicer arietinum
Ca_07284
I
0.841
Solyc11g056650.1
Solanum lycopersicum
Solyc11g056650.1
I
0.841
MTR_4g033295
Medicago truncatula
MTR_4g033295
I
0.839