Lus10001885.g (Linum usitatissimum)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Lus10001885.g T050132_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK20225.1
M01128_2.00 		Cannabis sativa
NCACGTGVN
NBCACGTGN		 PBM
Lambert et al.(2019)
pTH11274 		0.884 0.878
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10001885 bHLH 91 139

Links

Other bHLH family TFs
Other Linum usitatissimum TFs

84 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Lus10013917.g Linum usitatissimum Lus10013917.g I 0.912
Ciclev10016289m.g Citrus clementina Ciclev10016289m.g I 0.884
cassava32077.m1 Manihot esculenta cassava32077.m1 I 0.884
VIT_14s0068g01580 Vitis vinifera VIT_14s0068g01580 I 0.884
orange1.1g024670m.g Citrus sinensis orange1.1g024670m.g I 0.884
evm.TU.supercontig_7.53 Carica papaya evm.TU.supercontig_7.53 I 0.884
PK20225.1 Cannabis sativa PK20225.1 D 0.884
GLYMA07G32690 Glycine max GLYMA07G32690 I 0.884
cassava18812.valid.m1 Manihot esculenta cassava18812.valid.m1 I 0.882
TCM_029711 Theobroma cacao TCM_029711 I 0.882
Gorai.009G163400 Gossypium raimondii Gorai.009G163400 I 0.882
GLYMA13G36741 Glycine max GLYMA13G36741 I 0.875
GLYMA12G33751 Glycine max GLYMA12G33751 I 0.875
Eucgr.D00509 Eucalyptus grandis Eucgr.D00509 I 0.873
Cla013743 Citrullus lanatus Cla013743 I 0.870
Cucsa.200860 Cucumis sativus Cucsa.200860 I 0.870
Gorai.011G034000 Gossypium raimondii Gorai.011G034000 I 0.870
POPTR_0013s12190 Populus trichocarpa POPTR_0013s12190 N 0.864
POPTR_0019s11870 Populus trichocarpa POPTR_0019s11870 N 0.864
MTR_4g087920 Medicago truncatula MTR_4g087920 I 0.864
SapurV1A.0958s0180 Salix purpurea SapurV1A.0958s0180 N 0.864
GLYMA02G15780 Glycine max GLYMA02G15780 I 0.864
29646.m001078 Ricinus communis 29646.m001078 N 0.864
Ca_06386 Cicer arietinum Ca_06386 I 0.864
MDP0000249969 Malus domestica MDP0000249969 I 0.863
LjT46P06.140.nd Lotus japonicus LjT46P06.140.nd N 0.861
GLYMA12G14400 Glycine max GLYMA12G14400 N 0.861
Ca_19863 Cicer arietinum Ca_19863 N 0.861
GLYMA06G43560 Glycine max GLYMA06G43560 N 0.861
29900.m001610 Ricinus communis 29900.m001610 I 0.860
Sb03g001730 Sorghum bicolor Sb03g001730 I 0.858
Pavir.Eb00095 Panicum virgatum Pavir.Eb00095 I 0.858
GRMZM2G016039 Zea mays GRMZM2G016039 I 0.858
GRMZM2G166642 Zea mays GRMZM2G166642 I 0.858
Pavir.Ea00157 Panicum virgatum Pavir.Ea00157 I 0.858
MLOC_64390 Hordeum vulgare MLOC_64390 I 0.858
TRAES3BF011300020CFD_g Triticum aestivum TRAES3BF011300020CFD_g I 0.858
gene29828-v1.0-hybrid Fragaria vesca gene29828-v1.0-hybrid I 0.858
Eucgr.E02743 Eucalyptus grandis Eucgr.E02743 I 0.852
mgf022146m Mimulus guttatus mgf022146m N 0.850
MTR_4g079760 Medicago truncatula MTR_4g079760 N 0.850
VIT_12s0028g02350 Vitis vinifera VIT_12s0028g02350 N 0.850
Ca_02482 Cicer arietinum Ca_02482 N 0.848
OB01G17480 Oryza brachyantha OB01G17480 I 0.846
LPERR01G07000 Leersia perrieri LPERR01G07000 I 0.846
OMERI01G07330 Oryza meridionalis OMERI01G07330 I 0.846
OGLUM01G08450 Oryza glumaepatula OGLUM01G08450 I 0.846
ONIVA01G09540 Oryza nivara ONIVA01G09540 I 0.846
OS01G0218100 Oryza sativa OS01G0218100 I 0.846
BGIOSGA003013 Oryza indica BGIOSGA003013 I 0.846
ORUFI01G08040 Oryza rufipogon ORUFI01G08040 I 0.846
ORGLA01G0065100 Oryza glaberrima ORGLA01G0065100 I 0.846
OPUNC01G07130 Oryza punctata OPUNC01G07130 I 0.846
Si002517m.g Setaria italica Si002517m.g I 0.845
SapurV1A.2444s0040 Salix purpurea SapurV1A.2444s0040 N 0.843
orange1.1g024326m.g Citrus sinensis orange1.1g024326m.g N 0.843
Ciclev10016261m.g Citrus clementina Ciclev10016261m.g N 0.843
SapurV1A.0596s0110 Salix purpurea SapurV1A.0596s0110 N 0.843
LPERR03G10060 Leersia perrieri LPERR03G10060 I 0.842
SapurV1A.1821s0030 Salix purpurea SapurV1A.1821s0030 I 0.842
OB03G21490 Oryza brachyantha OB03G21490 I 0.842
SapurV1A.1185s0010 Salix purpurea SapurV1A.1185s0010 I 0.842
GSMUA_Achr1G21280_001 Musa acuminata GSMUA_Achr1G21280_001 I 0.842
GRMZM2G043854 Zea mays GRMZM2G043854 I 0.842
OBART03G11320 Oryza barthii OBART03G11320 I 0.842
OLONG_004075 Oryza longistaminata OLONG_004075 I 0.842
Sb01g040450 Sorghum bicolor Sb01g040450 I 0.842
BRADI1G67500 Brachypodium distachyon BRADI1G67500 I 0.842
Si039730m.g Setaria italica Si039730m.g I 0.842
OS03G0260600 Oryza sativa OS03G0260600 I 0.842
ORUFI03G11650 Oryza rufipogon ORUFI03G11650 I 0.842
Pavir.Ib01099 Panicum virgatum Pavir.Ib01099 I 0.842
ONIVA03G12280 Oryza nivara ONIVA03G12280 I 0.842
ORGLA03G0109100 Oryza glaberrima ORGLA03G0109100 I 0.842
OGLUM03G11280 Oryza glumaepatula OGLUM03G11280 I 0.842
MTR_2g015890 Medicago truncatula MTR_2g015890 I 0.840
Cla019977 Citrullus lanatus Cla019977 I 0.840
Cucsa.213230 Cucumis sativus Cucsa.213230 I 0.840
Si002655m.g Setaria italica Si002655m.g I 0.839
BRADI2G03830 Brachypodium distachyon BRADI2G03830 I 0.839
LPERR01G03590 Leersia perrieri LPERR01G03590 I 0.839
Pavir.Ea00439 Panicum virgatum Pavir.Ea00439 I 0.839
Pavir.Ca01107 Panicum virgatum Pavir.Ca01107 I 0.839
GRMZM2G088443 Zea mays GRMZM2G088443 I 0.839