PK20225.1 (Cannabis sativa)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 PK20225.1 T051607_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK20225.1
M01128_2.00		 Cannabis sativa
NCACGTGVN
NBCACGTGN		 PBM
Lambert et al.(2019)
pTH11274		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK07858.1
M01123_2.00 		Cannabis sativa
HCACGTGB
VCACGTGD		 PBM
Lambert et al.(2019)
pTH11370 		0.852 0.735
For this family, TFs with SR scores > 0.838 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M01128_2.00 bHLH 51 99

DNA Binding Domains

Protein ID Domain From To Sequence
PK20225.1 bHLH 80 128

Links

Other bHLH family TFs
Other Cannabis sativa TFs

109 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
evm.TU.supercontig_7.53 Carica papaya evm.TU.supercontig_7.53 I 0.914
GLYMA07G32690 Glycine max GLYMA07G32690 I 0.914
GLYMA02G15780 Glycine max GLYMA02G15780 I 0.894
Ca_06386 Cicer arietinum Ca_06386 I 0.894
MTR_4g087920 Medicago truncatula MTR_4g087920 I 0.894
orange1.1g024670m.g Citrus sinensis orange1.1g024670m.g I 0.884
Lus10001885.g Linum usitatissimum Lus10001885.g I 0.884
Ciclev10016289m.g Citrus clementina Ciclev10016289m.g I 0.884
cassava32077.m1 Manihot esculenta cassava32077.m1 I 0.884
VIT_14s0068g01580 Vitis vinifera VIT_14s0068g01580 I 0.884
TCM_029711 Theobroma cacao TCM_029711 I 0.882
Gorai.009G163400 Gossypium raimondii Gorai.009G163400 I 0.882
Lus10013917.g Linum usitatissimum Lus10013917.g I 0.882
cassava18812.valid.m1 Manihot esculenta cassava18812.valid.m1 I 0.882
LPERR01G07000 Leersia perrieri LPERR01G07000 I 0.876
GSMUA_Achr1G21280_001 Musa acuminata GSMUA_Achr1G21280_001 I 0.873
MTR_2g015890 Medicago truncatula MTR_2g015890 I 0.870
Gorai.011G034000 Gossypium raimondii Gorai.011G034000 I 0.870
MDP0000249969 Malus domestica MDP0000249969 I 0.863
29900.m001610 Ricinus communis 29900.m001610 I 0.860
gene29828-v1.0-hybrid Fragaria vesca gene29828-v1.0-hybrid I 0.858
TRAES3BF011300020CFD_g Triticum aestivum TRAES3BF011300020CFD_g I 0.858
Pavir.Eb00095 Panicum virgatum Pavir.Eb00095 I 0.858
GRMZM2G016039 Zea mays GRMZM2G016039 I 0.858
Sb03g001730 Sorghum bicolor Sb03g001730 I 0.858
Pavir.Ea00157 Panicum virgatum Pavir.Ea00157 I 0.858
MLOC_64390 Hordeum vulgare MLOC_64390 I 0.858
GRMZM2G166642 Zea mays GRMZM2G166642 I 0.858
GSMUA_Achr7G10740_001 Musa acuminata GSMUA_Achr7G10740_001 I 0.855
SapurV1A.0079s0530 Salix purpurea SapurV1A.0079s0530 I 0.852
Pm029004 Prunus mume Pm029004 I 0.852
29738.m001043 Ricinus communis 29738.m001043 I 0.852
Lus10021711.g Linum usitatissimum Lus10021711.g I 0.852
Cla020671 Citrullus lanatus Cla020671 I 0.852
cassava16550.m1 Manihot esculenta cassava16550.m1 I 0.852
Ca_08440 Cicer arietinum Ca_08440 I 0.852
PK07858.1 Cannabis sativa PK07858.1 D 0.852
Lus10035056.g Linum usitatissimum Lus10035056.g I 0.852
VIT_01s0011g02940 Vitis vinifera VIT_01s0011g02940 I 0.852
SapurV1A.3056s0010 Salix purpurea SapurV1A.3056s0010 I 0.852
SapurV1A.0304s0070 Salix purpurea SapurV1A.0304s0070 I 0.852
cassava46299.m1 Manihot esculenta cassava46299.m1 I 0.852
orange1.1g037785m.g Citrus sinensis orange1.1g037785m.g I 0.852
evm.TU.supercontig_53.118 Carica papaya evm.TU.supercontig_53.118 I 0.852
Gorai.008G186700 Gossypium raimondii Gorai.008G186700 I 0.852
MDP0000319726 Malus domestica MDP0000319726 I 0.852
TCM_011873 Theobroma cacao TCM_011873 I 0.852
Eucgr.G02351 Eucalyptus grandis Eucgr.G02351 I 0.852
Eucgr.E02743 Eucalyptus grandis Eucgr.E02743 I 0.852
mgf017635m Mimulus guttatus mgf017635m I 0.852
Cucsa.283920 Cucumis sativus Cucsa.283920 I 0.852
Aquca_002_01095 Aquilegia coerulea Aquca_002_01095 I 0.852
MDP0000271420 Malus domestica MDP0000271420 I 0.852
Ciclev10031900m.g Citrus clementina Ciclev10031900m.g I 0.852
Gorai.013G079600 Gossypium raimondii Gorai.013G079600 I 0.852
Solyc02g076920.2 Solanum lycopersicum Solyc02g076920.2 I 0.852
POPTR_0010s14010 Populus trichocarpa POPTR_0010s14010 I 0.852
PRUPE_ppa019406mg Prunus persica PRUPE_ppa019406mg I 0.852
POPTR_0008s11490 Populus trichocarpa POPTR_0008s11490 I 0.852
PGSC0003DMG400010208 Solanum tuberosum PGSC0003DMG400010208 I 0.852
PGSC0003DMG400007457 Solanum tuberosum PGSC0003DMG400007457 I 0.852
MTR_1g093750 Medicago truncatula MTR_1g093750 I 0.852
GSMUA_Achr11G13440_001 Musa acuminata GSMUA_Achr11G13440_001 I 0.852
GLYMA10G34910 Glycine max GLYMA10G34910 I 0.852
GLYMA20G32660 Glycine max GLYMA20G32660 I 0.852
SELMODRAFT_56610 Selaginella moellendorffii SELMODRAFT_56610 I 0.852
SELMODRAFT_46532 Selaginella moellendorffii SELMODRAFT_46532 I 0.852
ORGLA01G0065100 Oryza glaberrima ORGLA01G0065100 I 0.846
OPUNC01G07130 Oryza punctata OPUNC01G07130 I 0.846
OMERI01G07330 Oryza meridionalis OMERI01G07330 I 0.846
OB01G17480 Oryza brachyantha OB01G17480 I 0.846
BGIOSGA003013 Oryza indica BGIOSGA003013 I 0.846
ORUFI01G08040 Oryza rufipogon ORUFI01G08040 I 0.846
OGLUM01G08450 Oryza glumaepatula OGLUM01G08450 I 0.846
ONIVA01G09540 Oryza nivara ONIVA01G09540 I 0.846
OS01G0218100 Oryza sativa OS01G0218100 I 0.846
GLYMA13G36741 Glycine max GLYMA13G36741 I 0.845
GLYMA12G33751 Glycine max GLYMA12G33751 I 0.845
Si002517m.g Setaria italica Si002517m.g I 0.845
OBART03G11320 Oryza barthii OBART03G11320 I 0.842
OS03G0260600 Oryza sativa OS03G0260600 I 0.842
OB03G21490 Oryza brachyantha OB03G21490 I 0.842
ORUFI03G11650 Oryza rufipogon ORUFI03G11650 I 0.842
LPERR03G10060 Leersia perrieri LPERR03G10060 I 0.842
OGLUM03G11280 Oryza glumaepatula OGLUM03G11280 I 0.842
Sb01g040450 Sorghum bicolor Sb01g040450 I 0.842
OLONG_004075 Oryza longistaminata OLONG_004075 I 0.842
BRADI1G67500 Brachypodium distachyon BRADI1G67500 I 0.842
Si039730m.g Setaria italica Si039730m.g I 0.842
ORGLA03G0109100 Oryza glaberrima ORGLA03G0109100 I 0.842
Eucgr.D00509 Eucalyptus grandis Eucgr.D00509 I 0.842
SapurV1A.1821s0030 Salix purpurea SapurV1A.1821s0030 I 0.842
Pavir.Ib01099 Panicum virgatum Pavir.Ib01099 I 0.842
SapurV1A.1185s0010 Salix purpurea SapurV1A.1185s0010 I 0.842
ONIVA03G12280 Oryza nivara ONIVA03G12280 I 0.842
GRMZM2G043854 Zea mays GRMZM2G043854 I 0.842
Cla019977 Citrullus lanatus Cla019977 I 0.840
Cucsa.200860 Cucumis sativus Cucsa.200860 I 0.840
OPUNC09G11520 Oryza punctata OPUNC09G11520 I 0.840
Cucsa.213230 Cucumis sativus Cucsa.213230 I 0.840
AMTR_s00101p00150740 Amborella trichopoda AMTR_s00101p00150740 I 0.840
OMERI06G24090 Oryza meridionalis OMERI06G24090 I 0.840
Cla013743 Citrullus lanatus Cla013743 I 0.840
Pavir.Ca01107 Panicum virgatum Pavir.Ca01107 I 0.839
Pavir.Ea00439 Panicum virgatum Pavir.Ea00439 I 0.839
LPERR01G03590 Leersia perrieri LPERR01G03590 I 0.839
Si002655m.g Setaria italica Si002655m.g I 0.839
BRADI2G03830 Brachypodium distachyon BRADI2G03830 I 0.839
GRMZM2G088443 Zea mays GRMZM2G088443 I 0.839