Si011797m.g (Setaria italica)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 Si011797m.g T128662_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RBE
M01858_2.00 		Arabidopsis thaliana
NNNASWN
NWSTNNN		 PBM
Weirauch et al.(2014)
pTH7538 		0.767 0.826
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Si011797m C2H2 ZF 62 84

Links

Other C2H2 ZF family TFs
Other Setaria italica TFs

133 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
OBART04G02370 Oryza barthii OBART04G02370 I 0.817
Cla016442 Citrullus lanatus Cla016442 I 0.817
OB04G12040 Oryza brachyantha OB04G12040 I 0.817
Cucsa.313240 Cucumis sativus Cucsa.313240 I 0.817
GRMZM2G137736 Zea mays GRMZM2G137736 I 0.817
OGLUM04G02100 Oryza glumaepatula OGLUM04G02100 I 0.817
OLONG_022667 Oryza longistaminata OLONG_022667 I 0.817
ORUFI04G03150 Oryza rufipogon ORUFI04G03150 I 0.817
OS04G0168100 Oryza sativa OS04G0168100 I 0.817
Sb06g001730 Sorghum bicolor Sb06g001730 I 0.817
ONIVA04G01910 Oryza nivara ONIVA04G01910 I 0.817
OMERI04G02610 Oryza meridionalis OMERI04G02610 I 0.817
F775_21953 Aegilops tauschii F775_21953 I 0.817
LPERR04G01660 Leersia perrieri LPERR04G01660 I 0.817
BGIOSGA015610 Oryza indica BGIOSGA015610 I 0.817
Pavir.Gb02516 Panicum virgatum Pavir.Gb02516 I 0.817
Pavir.J31403 Panicum virgatum Pavir.J31403 I 0.817
gene08240-v1.0-hybrid Fragaria vesca gene08240-v1.0-hybrid I 0.815
Al_scaffold_0409_3 Arabidopsis lyrata Al_scaffold_0409_3 I 0.815
Thhalv10017870m.g Eutrema salsugineum Thhalv10017870m.g I 0.815
Solyc06g053720.1 Solanum lycopersicum Solyc06g053720.1 I 0.815
SapurV1A.0292s0200 Salix purpurea SapurV1A.0292s0200 I 0.815
VIT_05s0049g00070 Vitis vinifera VIT_05s0049g00070 I 0.815
TRIUR3_03721 Triticum urartu TRIUR3_03721 I 0.815
Solyc09g089590.1 Solanum lycopersicum Solyc09g089590.1 I 0.815
scaffold_403098.1 Arabidopsis lyrata scaffold_403098.1 I 0.815
Thhalv10021992m.g Eutrema salsugineum Thhalv10021992m.g I 0.815
PGSC0003DMG400040225 Solanum tuberosum PGSC0003DMG400040225 I 0.815
PGSC0003DMG400017271 Solanum tuberosum PGSC0003DMG400017271 I 0.815
PDK_20s1360411g001 Phoenix dactylifera PDK_20s1360411g001 I 0.815
PDK_20s1313421g001 Phoenix dactylifera PDK_20s1313421g001 I 0.815
POPTR_0002s04260 Populus trichocarpa POPTR_0002s04260 I 0.815
PRUPE_ppa015007mg Prunus persica PRUPE_ppa015007mg I 0.815
POPTR_0010s08530 Populus trichocarpa POPTR_0010s08530 I 0.815
SapurV1A.0007s0790 Salix purpurea SapurV1A.0007s0790 I 0.815
VIT_05s0049g00080 Vitis vinifera VIT_05s0049g00080 I 0.815
Bostr.25993s0539 Boechera stricta Bostr.25993s0539 I 0.815
MDP0000225209 Malus domestica MDP0000225209 I 0.815
Bostr.19424s0332 Boechera stricta Bostr.19424s0332 I 0.815
Cagra.2636s0028 Capsella grandiflora Cagra.2636s0028 I 0.815
Cagra.3462s0001 Capsella grandiflora Cagra.3462s0001 I 0.815
Ciclev10006961m.g Citrus clementina Ciclev10006961m.g I 0.815
Carubv10024766m.g Capsella rubella Carubv10024766m.g I 0.815
Carubv10016073m.g Capsella rubella Carubv10016073m.g I 0.815
OS11G0707300 Oryza sativa OS11G0707300 I 0.815
orange1.1g041626m.g Citrus sinensis orange1.1g041626m.g I 0.815
Pm009420 Prunus mume Pm009420 I 0.815
Gorai.005G047800 Gossypium raimondii Gorai.005G047800 I 0.815
SapurV1A.0006s1030 Salix purpurea SapurV1A.0006s1030 I 0.815
evm.TU.supercontig_44.99 Carica papaya evm.TU.supercontig_44.99 I 0.815
29603.m000536 Ricinus communis 29603.m000536 I 0.815
cassava40050.m1 Manihot esculenta cassava40050.m1 I 0.815
cassava3359.m1 Manihot esculenta cassava3359.m1 I 0.815
Gorai.006G247700 Gossypium raimondii Gorai.006G247700 I 0.815
Si024070m.g Setaria italica Si024070m.g I 0.815
OGLUM11G22950 Oryza glumaepatula OGLUM11G22950 I 0.815
OLONG_005038 Oryza longistaminata OLONG_005038 I 0.815
Bra005874 Brassica rapa Bra005874 I 0.815
SUP Arabidopsis thaliana AT3G23130 I 0.815
Bra023759 Brassica rapa Bra023759 I 0.815
SUP Arabidopsis lyrata fgenesh2_kg.3__2524__AT3G23130.1 I 0.815
BGIOSGA033510 Oryza indica BGIOSGA033510 I 0.815
OMERI07G13080 Oryza meridionalis OMERI07G13080 I 0.815
OBART11G23770 Oryza barthii OBART11G23770 I 0.815
ZFP11 Arabidopsis thaliana AT2G42410 I 0.815
Bo3g003640 Brassica oleracea Bo3g003640 I 0.815
Bo1g102390 Brassica oleracea Bo1g102390 I 0.815
ORUFI11G25670 Oryza rufipogon ORUFI11G25670 I 0.815
ONIVA11G23290 Oryza nivara ONIVA11G23290 I 0.815
GLYMA12G35930 Glycine max GLYMA12G35930 I 0.813
Ca_12901 Cicer arietinum Ca_12901 I 0.813
GLYMA13G34450 Glycine max GLYMA13G34450 I 0.813
Cla021878 Citrullus lanatus Cla021878 I 0.805
POPTR_0008s16390 Populus trichocarpa POPTR_0008s16390 I 0.805
AT4G17810 Arabidopsis thaliana AT4G17810 I 0.805
Cucsa.255130 Cucumis sativus Cucsa.255130 I 0.805
Bra013257 Brassica rapa Bra013257 I 0.805
Bostr.30275s0246 Boechera stricta Bostr.30275s0246 I 0.805
GRMZM2G000126 Zea mays GRMZM2G000126 I 0.805
Lus10022206.g Linum usitatissimum Lus10022206.g I 0.805
Cagra.3356s0074 Capsella grandiflora Cagra.3356s0074 I 0.805
Carubv10006881m.g Capsella rubella Carubv10006881m.g I 0.805
Bo1g017920 Brassica oleracea Bo1g017920 I 0.805
POPTR_0016s10480 Populus trichocarpa POPTR_0016s10480 I 0.792
cassava4410.m1 Manihot esculenta cassava4410.m1 N 0.791
TCM_021876 Theobroma cacao TCM_021876 N 0.791
Gorai.002G256500 Gossypium raimondii Gorai.002G256500 N 0.791
28345.m000111 Ricinus communis 28345.m000111 N 0.791
Pm002649 Prunus mume Pm002649 N 0.782
Gorai.012G106300 Gossypium raimondii Gorai.012G106300 I 0.767
Pavir.Ab00024 Panicum virgatum Pavir.Ab00024 I 0.767
Cagra.2117s0055 Capsella grandiflora Cagra.2117s0055 I 0.767
Bo9g176590 Brassica oleracea Bo9g176590 I 0.767
Gorai.008G226800 Gossypium raimondii Gorai.008G226800 I 0.767
Carubv10002935m.g Capsella rubella Carubv10002935m.g I 0.767
Pavir.Aa03593 Panicum virgatum Pavir.Aa03593 I 0.767
BGIOSGA018378 Oryza indica BGIOSGA018378 I 0.767
Bra009160 Brassica rapa Bra009160 I 0.767
RBE Arabidopsis lyrata fgenesh2_kg.6__542__AT5G06070.1 I 0.767
MLOC_76482 Hordeum vulgare MLOC_76482 I 0.767
TCM_021875 Theobroma cacao TCM_021875 I 0.767
Traes_1AL_80D0BD0DC Triticum aestivum Traes_1AL_80D0BD0DC I 0.767
Traes_1BL_4026DC5011 Triticum aestivum Traes_1BL_4026DC5011 I 0.767
TRIUR3_04794 Triticum urartu TRIUR3_04794 I 0.767
OLONG_023754 Oryza longistaminata OLONG_023754 I 0.767
Si019050m.g Setaria italica Si019050m.g I 0.767
ORUFI05G10920 Oryza rufipogon ORUFI05G10920 I 0.767
ORGLA05G0088100 Oryza glaberrima ORGLA05G0088100 I 0.767
OPUNC05G08760 Oryza punctata OPUNC05G08760 I 0.767
ONIVA06G26970 Oryza nivara ONIVA06G26970 I 0.767
OGLUM05G10360 Oryza glumaepatula OGLUM05G10360 I 0.767
OBART05G10090 Oryza barthii OBART05G10090 I 0.767
Thhalv10015420m.g Eutrema salsugineum Thhalv10015420m.g I 0.767
OS05G0286100 Oryza sativa OS05G0286100 I 0.767
SapurV1A.0378s0150 Salix purpurea SapurV1A.0378s0150 I 0.767
Bostr.13129s0367 Boechera stricta Bostr.13129s0367 I 0.767
GSMUA_Achr7G26850_001 Musa acuminata GSMUA_Achr7G26850_001 I 0.767
LPERR05G08090 Leersia perrieri LPERR05G08090 I 0.767
OB05G18710 Oryza brachyantha OB05G18710 I 0.767
MTR_1g070265 Medicago truncatula MTR_1g070265 I 0.767
cassava14614.m1 Manihot esculenta cassava14614.m1 I 0.767
RBE Arabidopsis thaliana AT5G06070 D 0.767
mg013419m Mimulus guttatus mg013419m I 0.765
e_gw1.1.457.1 Physcomitrella patens e_gw1.1.457.1 I 0.764
F775_00917 Aegilops tauschii F775_00917 I 0.764
e_gw1.6.268.1 Physcomitrella patens e_gw1.6.268.1 I 0.764
OPUNC11G05640 Oryza punctata OPUNC11G05640 I 0.757
Cla008944 Citrullus lanatus Cla008944 I 0.757
LjSGA_038753.2 Lotus japonicus LjSGA_038753.2 I 0.757
cassava22028.m1 Manihot esculenta cassava22028.m1 I 0.757
GLYMA11G34285 Glycine max GLYMA11G34285 I 0.757
Cucsa.321760 Cucumis sativus Cucsa.321760 I 0.757
OB02G10110 Oryza brachyantha OB02G10110 I 0.757