Pm002649 (Prunus mume)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Pm002649 T136790_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pm002649 C2H2 ZF 34 56

Links

Other C2H2 ZF family TFs
Other Prunus mume TFs

169 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
POPTR_0016s10480 Populus trichocarpa POPTR_0016s10480 I 0.817
TCM_021876 Theobroma cacao TCM_021876 N 0.815
cassava4410.m1 Manihot esculenta cassava4410.m1 N 0.815
28345.m000111 Ricinus communis 28345.m000111 N 0.815
Gorai.002G256500 Gossypium raimondii Gorai.002G256500 N 0.815
POPTR_0008s16390 Populus trichocarpa POPTR_0008s16390 I 0.805
Lus10022206.g Linum usitatissimum Lus10022206.g I 0.805
GRMZM2G000126 Zea mays GRMZM2G000126 I 0.805
Pm009420 Prunus mume Pm009420 I 0.794
VIT_05s0049g00080 Vitis vinifera VIT_05s0049g00080 I 0.794
VIT_05s0049g00070 Vitis vinifera VIT_05s0049g00070 I 0.794
Cla021878 Citrullus lanatus Cla021878 I 0.794
29603.m000536 Ricinus communis 29603.m000536 I 0.794
ONIVA11G23290 Oryza nivara ONIVA11G23290 I 0.794
cassava40050.m1 Manihot esculenta cassava40050.m1 I 0.794
cassava3359.m1 Manihot esculenta cassava3359.m1 I 0.794
TRIUR3_03721 Triticum urartu TRIUR3_03721 I 0.794
ORUFI11G25670 Oryza rufipogon ORUFI11G25670 I 0.794
Solyc09g089590.1 Solanum lycopersicum Solyc09g089590.1 I 0.794
PGSC0003DMG400017271 Solanum tuberosum PGSC0003DMG400017271 I 0.794
POPTR_0010s08530 Populus trichocarpa POPTR_0010s08530 I 0.794
POPTR_0002s04260 Populus trichocarpa POPTR_0002s04260 I 0.794
PRUPE_ppa015007mg Prunus persica PRUPE_ppa015007mg I 0.794
scaffold_403098.1 Arabidopsis lyrata scaffold_403098.1 I 0.794
PGSC0003DMG400040225 Solanum tuberosum PGSC0003DMG400040225 I 0.794
Solyc06g053720.1 Solanum lycopersicum Solyc06g053720.1 I 0.794
Al_scaffold_0409_3 Arabidopsis lyrata Al_scaffold_0409_3 I 0.794
OS11G0707300 Oryza sativa OS11G0707300 I 0.794
Cucsa.255130 Cucumis sativus Cucsa.255130 I 0.794
orange1.1g041626m.g Citrus sinensis orange1.1g041626m.g I 0.794
SapurV1A.0006s1030 Salix purpurea SapurV1A.0006s1030 I 0.794
MDP0000225209 Malus domestica MDP0000225209 I 0.794
Gorai.006G247700 Gossypium raimondii Gorai.006G247700 I 0.794
Gorai.005G047800 Gossypium raimondii Gorai.005G047800 I 0.794
SapurV1A.0007s0790 Salix purpurea SapurV1A.0007s0790 I 0.794
SapurV1A.0292s0200 Salix purpurea SapurV1A.0292s0200 I 0.794
PDK_20s1360411g001 Phoenix dactylifera PDK_20s1360411g001 I 0.794
PDK_20s1313421g001 Phoenix dactylifera PDK_20s1313421g001 I 0.794
Thhalv10021992m.g Eutrema salsugineum Thhalv10021992m.g I 0.794
Thhalv10017870m.g Eutrema salsugineum Thhalv10017870m.g I 0.794
gene08240-v1.0-hybrid Fragaria vesca gene08240-v1.0-hybrid I 0.794
evm.TU.supercontig_44.99 Carica papaya evm.TU.supercontig_44.99 I 0.794
Cagra.2636s0028 Capsella grandiflora Cagra.2636s0028 I 0.794
Bostr.30275s0246 Boechera stricta Bostr.30275s0246 I 0.794
Bostr.25993s0539 Boechera stricta Bostr.25993s0539 I 0.794
Bostr.19424s0332 Boechera stricta Bostr.19424s0332 I 0.794
Cagra.3356s0074 Capsella grandiflora Cagra.3356s0074 I 0.794
Cagra.3462s0001 Capsella grandiflora Cagra.3462s0001 I 0.794
Ciclev10006961m.g Citrus clementina Ciclev10006961m.g I 0.794
Carubv10024766m.g Capsella rubella Carubv10024766m.g I 0.794
Carubv10016073m.g Capsella rubella Carubv10016073m.g I 0.794
Carubv10006881m.g Capsella rubella Carubv10006881m.g I 0.794
OMERI07G13080 Oryza meridionalis OMERI07G13080 I 0.794
Si024070m.g Setaria italica Si024070m.g I 0.794
OGLUM11G22950 Oryza glumaepatula OGLUM11G22950 I 0.794
Bra005874 Brassica rapa Bra005874 I 0.794
Bo3g003640 Brassica oleracea Bo3g003640 I 0.794
Bra013257 Brassica rapa Bra013257 I 0.794
Bra023759 Brassica rapa Bra023759 I 0.794
SUP Arabidopsis lyrata fgenesh2_kg.3__2524__AT3G23130.1 I 0.794
OBART11G23770 Oryza barthii OBART11G23770 I 0.794
Bo1g102390 Brassica oleracea Bo1g102390 I 0.794
OLONG_005038 Oryza longistaminata OLONG_005038 I 0.794
SUP Arabidopsis thaliana AT3G23130 I 0.794
Bo1g017920 Brassica oleracea Bo1g017920 I 0.794
ZFP11 Arabidopsis thaliana AT2G42410 I 0.794
BGIOSGA033510 Oryza indica BGIOSGA033510 I 0.794
AT4G17810 Arabidopsis thaliana AT4G17810 I 0.794
Cla016442 Citrullus lanatus Cla016442 I 0.792
Cucsa.313240 Cucumis sativus Cucsa.313240 I 0.792
Ca_12901 Cicer arietinum Ca_12901 I 0.792
GLYMA12G35930 Glycine max GLYMA12G35930 I 0.792
GLYMA13G34450 Glycine max GLYMA13G34450 I 0.792
OMERI04G02610 Oryza meridionalis OMERI04G02610 I 0.782
LPERR04G01660 Leersia perrieri LPERR04G01660 I 0.782
F775_21953 Aegilops tauschii F775_21953 I 0.782
Pavir.Gb02516 Panicum virgatum Pavir.Gb02516 I 0.782
Si011797m.g Setaria italica Si011797m.g I 0.782
Pavir.J31403 Panicum virgatum Pavir.J31403 I 0.782
BGIOSGA015610 Oryza indica BGIOSGA015610 I 0.782
GRMZM2G137736 Zea mays GRMZM2G137736 I 0.782
ORUFI04G03150 Oryza rufipogon ORUFI04G03150 I 0.782
Sb06g001730 Sorghum bicolor Sb06g001730 I 0.782
OGLUM04G02100 Oryza glumaepatula OGLUM04G02100 I 0.782
OBART04G02370 Oryza barthii OBART04G02370 I 0.782
OLONG_022667 Oryza longistaminata OLONG_022667 I 0.782
OS04G0168100 Oryza sativa OS04G0168100 I 0.782
OB04G12040 Oryza brachyantha OB04G12040 I 0.782
ONIVA04G01910 Oryza nivara ONIVA04G01910 I 0.782
chr1.CM0147.870.nc Lotus japonicus chr1.CM0147.870.nc I 0.779
Ciclev10006751m.g Citrus clementina Ciclev10006751m.g N 0.779
Eucgr.H00184 Eucalyptus grandis Eucgr.H00184 N 0.779
OGLUM07G11160 Oryza glumaepatula OGLUM07G11160 N 0.779
evm.TU.supercontig_44.98 Carica papaya evm.TU.supercontig_44.98 N 0.779
Carubv10028256m.g Capsella rubella Carubv10028256m.g N 0.779
Bra027500 Brassica rapa Bra027500 N 0.779
Bostr.3148s0115 Boechera stricta Bostr.3148s0115 N 0.779
GLYMA10G32810 Glycine max GLYMA10G32810 N 0.779
scaffold_800693.1 Arabidopsis lyrata scaffold_800693.1 N 0.779
OBART07G11660 Oryza barthii OBART07G11660 N 0.779
Bra033683 Brassica rapa Bra033683 N 0.779
OS07G0417400 Oryza sativa OS07G0417400 N 0.779
gene30215-v1.0-hybrid Fragaria vesca gene30215-v1.0-hybrid N 0.779
ONIVA07G09630 Oryza nivara ONIVA07G09630 N 0.779
orange1.1g037433m.g Citrus sinensis orange1.1g037433m.g N 0.779
ORGLA07G0099100 Oryza glaberrima ORGLA07G0099100 N 0.779
OPUNC07G10480 Oryza punctata OPUNC07G10480 N 0.779
BGIOSGA025569 Oryza indica BGIOSGA025569 N 0.779
ORUFI07G11810 Oryza rufipogon ORUFI07G11810 N 0.779
MDP0000143134 Malus domestica MDP0000143134 N 0.779
Bo7g065530 Brassica oleracea Bo7g065530 N 0.779
Bo9g059250 Brassica oleracea Bo9g059250 N 0.779
OB07G18110 Oryza brachyantha OB07G18110 N 0.779
Gorai.011G172000 Gossypium raimondii Gorai.011G172000 N 0.779
OLONG_012182 Oryza longistaminata OLONG_012182 N 0.779
ONIVA07G09640 Oryza nivara ONIVA07G09640 N 0.779
Cagra.19122s0001 Capsella grandiflora Cagra.19122s0001 N 0.779
LPERR07G09750 Leersia perrieri LPERR07G09750 N 0.779
GLYMA20G34840 Glycine max GLYMA20G34840 N 0.779
Cla021877 Citrullus lanatus Cla021877 N 0.779
GSMUA_Achr8G14360_001 Musa acuminata GSMUA_Achr8G14360_001 N 0.779
Pm009419 Prunus mume Pm009419 N 0.779
PRUPE_ppa021945mg Prunus persica PRUPE_ppa021945mg N 0.779
PRUPE_ppa016491mg Prunus persica PRUPE_ppa016491mg N 0.779
MTR_1g075430 Medicago truncatula MTR_1g075430 N 0.779
MTR_7g063220 Medicago truncatula MTR_7g063220 I 0.779
TCM_020819 Theobroma cacao TCM_020819 N 0.779
AMTR_s00012p00258620 Amborella trichopoda AMTR_s00012p00258620 N 0.776
VIT_06s0004g05260 Vitis vinifera VIT_06s0004g05260 N 0.776
AMTR_s00009p00194700 Amborella trichopoda AMTR_s00009p00194700 N 0.776
Pavir.Ba02387 Panicum virgatum Pavir.Ba02387 I 0.769
Pavir.Bb00955 Panicum virgatum Pavir.Bb00955 I 0.769
Traes_2BS_0544D9D4B Triticum aestivum Traes_2BS_0544D9D4B I 0.769
Traes_2DS_035AA95E3 Triticum aestivum Traes_2DS_035AA95E3 I 0.769
cassava32634.m1 Manihot esculenta cassava32634.m1 N 0.769
TRIUR3_25222 Triticum urartu TRIUR3_25222 I 0.769
Traes_2AS_099955797 Triticum aestivum Traes_2AS_099955797 I 0.769
GLYMA12G06340 Glycine max GLYMA12G06340 N 0.769
mgf024356m Mimulus guttatus mgf024356m I 0.769
Si032478m.g Setaria italica Si032478m.g I 0.769
SapurV1A.0292s0190 Salix purpurea SapurV1A.0292s0190 I 0.769
SapurV1A.0007s0800 Salix purpurea SapurV1A.0007s0800 I 0.769
MTR_4g064873 Medicago truncatula MTR_4g064873 N 0.769
Lus10022204.g Linum usitatissimum Lus10022204.g I 0.769
Cucsa.117650 Cucumis sativus Cucsa.117650 N 0.769
Lus10021213.g Linum usitatissimum Lus10021213.g I 0.769
Sb02g009930 Sorghum bicolor Sb02g009930 I 0.769
PRUPE_ppb012667mg Prunus persica PRUPE_ppb012667mg N 0.769
BRADI1G52490 Brachypodium distachyon BRADI1G52490 I 0.769
Cla008348 Citrullus lanatus Cla008348 N 0.769
GLYMA07G16290 Glycine max GLYMA07G16290 I 0.769
GRMZM2G409452 Zea mays GRMZM2G409452 I 0.769
GRMZM2G443109 Zea mays GRMZM2G443109 I 0.769
Aquca_003_00162 Aquilegia coerulea Aquca_003_00162 N 0.767
PDK_20s1360411g002 Phoenix dactylifera PDK_20s1360411g002 N 0.766
Ciclev10022375m.g Citrus clementina Ciclev10022375m.g N 0.766
PK22236.1 Cannabis sativa PK22236.1 N 0.766
Cucsa.016990 Cucumis sativus Cucsa.016990 N 0.766
MTR_1g070250 Medicago truncatula MTR_1g070250 N 0.766
Cla006093 Citrullus lanatus Cla006093 N 0.766
orange1.1g044013m.g Citrus sinensis orange1.1g044013m.g N 0.766
GSMUA_Achr11G02150_001 Musa acuminata GSMUA_Achr11G02150_001 N 0.760
Si019563m.g Setaria italica Si019563m.g I 0.757
Sb04g037590 Sorghum bicolor Sb04g037590 I 0.757
GRMZM2G344974 Zea mays GRMZM2G344974 I 0.757
Cla008944 Citrullus lanatus Cla008944 I 0.757
Cucsa.321760 Cucumis sativus Cucsa.321760 I 0.757
Pavir.Ab03315 Panicum virgatum Pavir.Ab03315 I 0.757
OB02G44430 Oryza brachyantha OB02G44430 I 0.757