CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Grhl2
(
Rattus norvegicus
)
Grainyhead
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF04516 (CP2)
IPR007604
ENSRNOG00000007000
T199215_2.00
Ensembl (2018-Dec-8)
Link out
NCBI Gene Info:
Predicted to enable DNA binding activity and DNA-binding transcription activator activity, RNA polymerase II-specific. Predicted to be involved in several processes, including epithelial cell differentiation; nervous system development; and regulation of nucleobase-containing compound metabolic process. Predicted to act upstream of or within several processes, including animal organ development; embryonic morphogenesis; and face development. Predicted to be located in cell-cell junction and nucleoplasm. Predicted to be active in nucleus. Human ortholog(s) of this gene implicated in autosomal dominant nonsyndromic deafness 28 and posterior polymorphous corneal dystrophy 4. Orthologous to human GRHL2 (grainyhead like transcription factor 2). [provided by Alliance of Genome Resources, Apr 2022]
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Grhl2
M09126_2.00
Mus musculus
RDCCDGTYYKDC
GHMRRACHGGHY
Misc
Kulakovskiy et al.(2013)
GRHL2_MOUSE.H11MO.0.A
0.996
0.996
GRHL2
M08129_2.00
Homo sapiens
NNNAACTGGTTTNNN
NNNAAACCAGTTNNN
ChIP-seq
Mathelier et al.(2014)
MA1105.1
0.973
0.973
GRHL2
M09125_2.00
Homo sapiens
AACYDGYYBDDC
GHHVRRCHRGTT
Misc
Kulakovskiy et al.(2013)
GRHL2_HUMAN.H11MO.0.A
0.973
0.973
GRHL2
M09558_2.00
Homo sapiens
NRAACHDGHHDDDCHDGTTY
RAACHDGHHHDDCHDGTTYN
Misc
Heinz et al.(2010)
HBE-GRHL2_GSE46194
0.973
0.973
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSRNOP00000009337
Grainyhead
215
439
STYSESFKDGAPEKFRSTSVGADEYTYDQTGSGTFQYTLEATKSLRQKQGEGPMTYLNKGQFYAITLSETGDNKCFRHPISKVRSVVMVVFSEDKNRDEQLKYWKYWHSRQHTAKQRVLDIADYKESFNTIGNIEEIAYNAVSFTWDVNEEAKIFITVNCLSTDFSSQKGVKGLPLMIQIDTYSYNNRSNKPIHRAYCQIKVFCDKGAERKIRDEERKQNRKKGK
ENSRNOP00000069927
Grainyhead
214
438
STYSESFKDGAPEKFRSTSVGADEYTYDQTGSGTFQYTLEATKSLRQKQGEGPMTYLNKGQFYAITLSETGDNKCFRHPISKVRSVVMVVFSEDKNRDEQLKYWKYWHSRQHTAKQRVLDIADYKESFNTIGNIEEIAYNAVSFTWDVNEEAKIFITVNCLSTDFSSQKGVKGLPLMIQIDTYSYNNRSNKPIHRAYCQIKVFCDKGAERKIRDEERKQNRKKGK
Links
Other
Grainyhead
family TFs
Other
Rattus norvegicus
TFs
111 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Grhl2
Mus musculus
ENSMUSG00000022286
D
0.996
GRHL2
Sus scrofa
ENSSSCG00000006060
I
0.982
ENSCSAG00000011989
Chlorocebus sabaeus
ENSCSAG00000011989
I
0.973
GRHL2
Cavia porcellus
ENSCPOG00000005630
I
0.973
GRHL2
Homo sapiens
ENSG00000083307
D
0.973
ENSPANG00000017807
Papio anubis
ENSPANG00000017807
I
0.973
GRHL2
Pan troglodytes
ENSPTRG00000020479
I
0.973
GRHL2
Callithrix jacchus
ENSCJAG00000015886
I
0.973
Myotis_brandtii_GRHL2_10032153
Myotis brandtii
Myotis_brandtii_GRHL2_10032153
I
0.973
GRHL2
Myotis lucifugus
ENSMLUG00000010961
I
0.973
ENSNLEG00000003271
Nomascus leucogenys
ENSNLEG00000003271
I
0.968
ENSSHAG00000015849
Sarcophilus harrisii
ENSSHAG00000015849
I
0.968
ENSSTOG00000001498
Ictidomys tridecemlineatus
ENSSTOG00000001498
I
0.964
GRHL2
Gorilla gorilla
ENSGGOG00000004401
I
0.964
GRHL2
Monodelphis domestica
ENSMODG00000006048
I
0.964
GRHL2
Otolemur garnettii
ENSOGAG00000004751
I
0.959
ENSAPLG00000002882
Anas platyrhynchos
ENSAPLG00000002882
I
0.950
GRHL2
Microcebus murinus
ENSMICG00000014771
I
0.946
Brh_R013325
Buceros rhinoceros
Brh_R013325
I
0.941
Afo_R002230
Aptenodytes forsteri
Afo_R002230
I
0.941
ENSFALG00000005879
Ficedula albicollis
ENSFALG00000005879
I
0.941
Aan_R003923
Calypte anna
Aan_R003923
I
0.941
ENSPPYG00000018794
Pongo abelii
ENSPPYG00000018794
I
0.938
ENSGALG00000014208
Gallus gallus
ENSGALG00000014208
I
0.937
GRHL2
Canis familiaris
ENSCAFG00000000587
I
0.935
ENSPSIG00000003669
Pelodiscus sinensis
ENSPSIG00000003669
I
0.932
grhl2
Xenopus tropicalis
XB-GENE-485995
I
0.928
Pvit_03833
Pogona vitticeps
Pvit_03833
I
0.928
GRHL2
Macaca mulatta
ENSMMUG00000020995
I
0.924
ENSP00000379261
Macaca fascicularis
ENSP00000379261
I
0.924
GRHL2
Loxodonta africana
ENSLAFG00000010356
I
0.923
GRHL2
Ornithorhynchus anatinus
ENSOANG00000004305
I
0.919
ENSLACG00000006172
Latimeria chalumnae
ENSLACG00000006172
I
0.914
GRHL2
Anolis carolinensis
ENSACAG00000008759
I
0.910
grhl1
Danio rerio
ENSDARG00000061391
I
0.901
Gfo_R006019
Geospiza fortis
Gfo_R006019
I
0.899
GRHL2
Meleagris gallopavo
ENSMGAG00000012259
I
0.896
ENSAMEG00000000278
Ailuropoda melanoleuca
ENSAMEG00000000278
I
0.892
ENSOARG00000018325
Ovis aries
ENSOARG00000018325
I
0.892
GRHL2
Tursiops truncatus
ENSTTRG00000005794
I
0.892
ENSMPUG00000015153
Mustela putorius furo
ENSMPUG00000015153
I
0.892
GRHL2
Bos taurus
ENSBTAG00000004518
I
0.892
ENSP00000251808-D1
Bos grunniens
ENSP00000251808-D1
I
0.892
ENSLOCG00000009655
Lepisosteus oculatus
ENSLOCG00000009655
I
0.888
GRHL2
Dasypus novemcinctus
ENSDNOG00000048641
I
0.887
GRHL2
Felis catus
ENSFCAG00000004963
I
0.887
GRHL2
Equus caballus
ENSECAG00000013681
I
0.880
GRHL2
Oryctolagus cuniculus
ENSOCUG00000004750
I
0.880
ENSSTOG00000019842
Ictidomys tridecemlineatus
ENSSTOG00000019842
I
0.878
GRHL2
Erinaceus europaeus
ENSEEUG00000015263
I
0.869
Ogr11913
Ophisaurus gracilis
Ogr11913
I
0.865
ENSTGUG00000012086
Taeniopygia guttata
ENSTGUG00000012086
I
0.860
grhl2b
Danio rerio
ENSDARG00000061974
I
0.856
ENSPFOG00000006095
Poecilia formosa
ENSPFOG00000006095
I
0.829
ENSXMAG00000003725
Xiphophorus maculatus
ENSXMAG00000003725
I
0.829
grhl2b
Gasterosteus aculeatus
ENSGACG00000003695
I
0.806
ENSPMAG00000005869
Petromyzon marinus
ENSPMAG00000005869
I
0.797
ENSONIG00000002710
Oreochromis niloticus
ENSONIG00000002710
I
0.793
grhl2b
Tetraodon nigroviridis
ENSTNIG00000009151
I
0.777
grhl2b
Takifugu rubripes
ENSTRUG00000002119
I
0.775
ENSAMXG00000000221
Astyanax mexicanus
ENSAMXG00000000221
I
0.775
Alligator_sinensis_CCG017490.1
Alligator sinensis
Alligator_sinensis_CCG017490.1
I
0.774
grhl1
Takifugu rubripes
ENSTRUG00000013628
I
0.766
grhl2a
Danio rerio
ENSDARG00000058342
I
0.761
ENSPFOG00000004774
Poecilia formosa
ENSPFOG00000004774
I
0.760
ENSONIG00000003707
Oreochromis niloticus
ENSONIG00000003707
I
0.757
ENSLOCG00000016835
Lepisosteus oculatus
ENSLOCG00000016835
I
0.748
grhl2a
Tetraodon nigroviridis
ENSTNIG00000013309
I
0.744
ENSXMAG00000013267
Xiphophorus maculatus
ENSXMAG00000013267
I
0.743
grhl1
Tetraodon nigroviridis
ENSTNIG00000017317
I
0.739
ENSAMXG00000016712
Astyanax mexicanus
ENSAMXG00000016712
I
0.734
GRHL1
Vicugna pacos
ENSVPAG00000010842
I
0.732
ENSOARG00000015298
Ovis aries
ENSOARG00000015298
I
0.732
XP_002938935
Xenopus tropicalis
XP_002938935
I
0.731
grhl1.L
Xenopus laevis
XB-GENE-486580
I
0.731
grhl1
Oryzias latipes
ENSORLG00000015232
I
0.730
ENSPANG00000020814
Papio anubis
ENSPANG00000020814
I
0.728
ENSSHAG00000002291
Sarcophilus harrisii
ENSSHAG00000002291
I
0.728
ENSPPYG00000012661
Pongo abelii
ENSPPYG00000012661
I
0.728
GRHL1
Equus caballus
ENSECAG00000015969
I
0.728
grhl1
Gasterosteus aculeatus
ENSGACG00000008845
I
0.725
ENSAPLG00000008667
Anas platyrhynchos
ENSAPLG00000008667
I
0.724
ENSMPUG00000013263
Mustela putorius furo
ENSMPUG00000013263
I
0.723
GRHL1
Canis familiaris
ENSCAFG00000003394
I
0.723
GRHL1
Pan troglodytes
ENSPTRG00000011643
I
0.723
ENSAMEG00000011320
Ailuropoda melanoleuca
ENSAMEG00000011320
I
0.723
Grhl1
Mus musculus
ENSMUSG00000020656
I
0.721
GRHL1
Cavia porcellus
ENSCPOG00000010783
I
0.717
Aan_R015393
Calypte anna
Aan_R015393
I
0.712
nDi.2.2.2.g12300
Dirofilaria immitis
nDi.2.2.2.g12300
I
0.709
GRHL1
Dasypus novemcinctus
ENSDNOG00000014493
I
0.707
ENSCSAG00000007158
Chlorocebus sabaeus
ENSCSAG00000007158
I
0.707
ENSNLEG00000013634
Nomascus leucogenys
ENSNLEG00000013634
I
0.707
Gfo_R015266
Geospiza fortis
Gfo_R015266
I
0.707
ENSMMUP00000002046
Macaca fascicularis
ENSMMUP00000002046
I
0.707
ENSFALG00000006639
Ficedula albicollis
ENSFALG00000006639
I
0.707
Tal_R012680
Tyto alba
Tal_R012680
I
0.707
Afo_R015753
Aptenodytes forsteri
Afo_R015753
I
0.707
GRHL1
Anolis carolinensis
ENSACAG00000000132
I
0.707
Brh_R003016
Buceros rhinoceros
Brh_R003016
I
0.707
GRHL1
Macaca mulatta
ENSMMUG00000001535
I
0.707
GRHL1
Ornithorhynchus anatinus
ENSOANG00000007788
I
0.703
GRHL1
Loxodonta africana
ENSLAFG00000009330
I
0.703
GRHL1
Gorilla gorilla
ENSGGOG00000002692
I
0.703
GRHL1
Meleagris gallopavo
ENSMGAG00000014007
I
0.703
GRHL1
Taeniopygia guttata
ENSTGUG00000013038
I
0.703
GRHL1
Monodelphis domestica
ENSMODG00000014753
I
0.703
GRHL1
Myotis lucifugus
ENSMLUG00000002290
I
0.703
ENSGALG00000016439
Gallus gallus
ENSGALG00000016439
I
0.703
SNAPOd2T00016626001
Oikopleura dioica
SNAPOd2T00016626001
I
0.700