grhl1.L (Xenopus laevis)
Grainyhead

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF04516 (CP2) IPR007604 XB-GENE-486580 T199608_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
GRHL1
M03071_2.00
Homo sapiens
RACYKGWHNDWCMGGTT

AACCKGWHNDWCMRGTY
SELEX
Jolma et al.(2013)
GRHL1_1
0.929 0.929
GRHL1
M03072_2.00
Homo sapiens
DAACCGGTTH

DAACCGGTTH
SELEX
Jolma et al.(2013)
GRHL1_2
0.929 0.929
GRHL1
M03073_2.00
Homo sapiens
HWAACCGGTTTD

HAAACCGGTTWD
SELEX
Jolma et al.(2013)
GRHL1_3
0.929 0.929
GRHL1
M04887_2.00
Homo sapiens
DAACCGGTTH

DAACCGGTTH
SELEX
Yin et al.(2017)
GRHL1_eDBD_HT-SELEX
0.929 0.929
GRHL1
M04888_2.00
Homo sapiens
DAACMKGTTH

DAACMKGTTH
SELEX
Yin et al.(2017)
GRHL1_eDBD_Methyl-HT-SELEX
0.934 0.934
Grhl2
M09126_2.00
Mus musculus
RDCCDGTYYKDC

GHMRRACHGGHY
Misc
Kulakovskiy et al.(2013)
GRHL2_MOUSE.H11MO.0.A
0.736 0.736
GRHL2
M08129_2.00
Homo sapiens
NNNAACTGGTTTNNN

NNNAAACCAGTTNNN
ChIP-seq
Mathelier et al.(2014)
MA1105.1
0.731 0.731
GRHL2
M09125_2.00
Homo sapiens
AACYDGYYBDDC

GHHVRRCHRGTT
Misc
Kulakovskiy et al.(2013)
GRHL2_HUMAN.H11MO.0.A
0.731 0.731
GRHL2
M09558_2.00
Homo sapiens
NRAACHDGHHDDDCHDGTTY

RAACHDGHHHDDCHDGTTYN
Misc
Heinz et al.(2010)
HBE-GRHL2_GSE46194
0.731 0.731
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AAI69982 Grainyhead 222 433
AAT88108 Grainyhead 222 433

Links

Other Grainyhead family TFs
Other Xenopus laevis TFs

118 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
XP_002938936 Xenopus tropicalis XP_002938936 I 0.995
XP_002938935 Xenopus tropicalis XP_002938935 I 0.995
ENSMMUP00000002046 Macaca fascicularis ENSMMUP00000002046 I 0.948
ENSCSAG00000007158 Chlorocebus sabaeus ENSCSAG00000007158 I 0.948
GRHL1 Dasypus novemcinctus ENSDNOG00000014493 I 0.948
GRHL1 Macaca mulatta ENSMMUG00000001535 I 0.948
ENSNLEG00000013634 Nomascus leucogenys ENSNLEG00000013634 I 0.948
GRHL1 Gorilla gorilla ENSGGOG00000002692 I 0.943
GRHL1 Vicugna pacos ENSVPAG00000010842 I 0.943
ENSSHAG00000002291 Sarcophilus harrisii ENSSHAG00000002291 I 0.939
GRHL1 Homo sapiens ENSG00000134317 D 0.939
ENSPANG00000020814 Papio anubis ENSPANG00000020814 I 0.939
ENSPPYG00000012661 Pongo abelii ENSPPYG00000012661 I 0.939
Myotis_brandtii_GRHL1_10020834 Myotis brandtii Myotis_brandtii_GRHL1_10020834 I 0.939
GRHL1 Myotis lucifugus ENSMLUG00000002290 I 0.939
GRHL1 Callithrix jacchus ENSCJAG00000006431 I 0.934
GRHL1 Ornithorhynchus anatinus ENSOANG00000007788 I 0.934
GRHL1 Loxodonta africana ENSLAFG00000009330 I 0.934
GRHL1 Canis familiaris ENSCAFG00000003394 I 0.934
GRHL1 Pan troglodytes ENSPTRG00000011643 I 0.934
GRHL1 Otolemur garnettii ENSOGAG00000014342 I 0.934
GRHL1 Pteropus vampyrus ENSPVAG00000002002 I 0.934
ENSSTOG00000019842 Ictidomys tridecemlineatus ENSSTOG00000019842 I 0.932
ENSOARG00000015298 Ovis aries ENSOARG00000015298 I 0.930
GRHL1 Equus caballus ENSECAG00000015969 I 0.930
Gfo_R015266 Geospiza fortis Gfo_R015266 I 0.929
Afo_R015753 Aptenodytes forsteri Afo_R015753 I 0.929
GRHL1 Meleagris gallopavo ENSMGAG00000014007 I 0.929
GRHL1 Monodelphis domestica ENSMODG00000014753 I 0.929
ENSFALG00000006639 Ficedula albicollis ENSFALG00000006639 I 0.929
Tal_R012680 Tyto alba Tal_R012680 I 0.929
ENSGALG00000016439 Gallus gallus ENSGALG00000016439 I 0.929
ENSMPUG00000013263 Mustela putorius furo ENSMPUG00000013263 I 0.929
ENSAMEG00000011320 Ailuropoda melanoleuca ENSAMEG00000011320 I 0.929
ENSAPLG00000008667 Anas platyrhynchos ENSAPLG00000008667 I 0.929
GRHL1 Taeniopygia guttata ENSTGUG00000013038 I 0.925
Grhl1 Mus musculus ENSMUSG00000020656 I 0.925
GRHL1 Cavia porcellus ENSCPOG00000010783 I 0.925
GRHL1 Oryctolagus cuniculus ENSOCUG00000017717 I 0.920
GRHL1 Felis catus ENSFCAG00000007856 I 0.920
GRHL1 Bos taurus ENSBTAG00000007485 I 0.920
ENSP00000384209-D1 Bos grunniens ENSP00000384209-D1 I 0.920
Ogr04284 Ophisaurus gracilis Ogr04284 I 0.915
ENSSTOG00000002434 Ictidomys tridecemlineatus ENSSTOG00000002434 I 0.908
grhl1 Danio rerio ENSDARG00000061391 I 0.901
GRHL1 Anolis carolinensis ENSACAG00000000132 I 0.892
Brh_R003016 Buceros rhinoceros Brh_R003016 I 0.873
Aan_R015393 Calypte anna Aan_R015393 I 0.868
ENSPSIG00000010930 Pelodiscus sinensis ENSPSIG00000010930 I 0.854
Tal_R009556 Tyto alba Tal_R009556 I 0.837
ENSTGUG00000014574 Taeniopygia guttata ENSTGUG00000014574 I 0.837
ENSLOCG00000016835 Lepisosteus oculatus ENSLOCG00000016835 I 0.825
grhl1 Takifugu rubripes ENSTRUG00000013628 I 0.816
Alligator_sinensis_CCG017490.1 Alligator sinensis Alligator_sinensis_CCG017490.1 I 0.815
ENSPMAG00000005876 Petromyzon marinus ENSPMAG00000005876 I 0.811
ENSONIG00000003707 Oreochromis niloticus ENSONIG00000003707 I 0.807
Grhl1 Rattus norvegicus ENSRNOG00000054989 I 0.807
grhl1 Tetraodon nigroviridis ENSTNIG00000017317 I 0.802
Pvit_14440 Pogona vitticeps Pvit_14440 I 0.797
grhl1 Oryzias latipes ENSORLG00000015232 I 0.788
ENSTSYG00000004124 Tarsius syrichta ENSTSYG00000004124 I 0.787
ENSPFOG00000004774 Poecilia formosa ENSPFOG00000004774 I 0.783
ENSTGUG00000012086 Taeniopygia guttata ENSTGUG00000012086 I 0.782
grhl1 Gasterosteus aculeatus ENSGACG00000008845 I 0.778
ENSXMAG00000013267 Xiphophorus maculatus ENSXMAG00000013267 I 0.778
ENSPMAG00000005869 Petromyzon marinus ENSPMAG00000005869 I 0.771
Cmyd_10003336 Chelonia mydas Cmyd_10003336 I 0.764
GRHL2 Equus caballus ENSECAG00000013681 I 0.755
GRHL2 Dasypus novemcinctus ENSDNOG00000048641 I 0.750
ENSP00000251808-D1 Bos grunniens ENSP00000251808-D1 I 0.750
GRHL2 Felis catus ENSFCAG00000004963 I 0.750
ENSAMEG00000000278 Ailuropoda melanoleuca ENSAMEG00000000278 I 0.750
ENSMPUG00000015153 Mustela putorius furo ENSMPUG00000015153 I 0.750
ENSOARG00000018325 Ovis aries ENSOARG00000018325 I 0.750
GRHL2 Oryctolagus cuniculus ENSOCUG00000004750 I 0.750
GRHL2 Tursiops truncatus ENSTTRG00000005794 I 0.750
GRHL2 Bos taurus ENSBTAG00000004518 I 0.750
grhl2 Xenopus tropicalis XB-GENE-485995 I 0.741
ENSPSIG00000003669 Pelodiscus sinensis ENSPSIG00000003669 I 0.741
Myotis_brandtii_GRHL2_10032153 Myotis brandtii Myotis_brandtii_GRHL2_10032153 I 0.736
GRHL2 Otolemur garnettii ENSOGAG00000004751 I 0.736
Grhl2 Mus musculus ENSMUSG00000022286 D 0.736
GRHL2 Monodelphis domestica ENSMODG00000006048 I 0.736
GRHL2 Meleagris gallopavo ENSMGAG00000012259 I 0.736
GRHL2 Canis familiaris ENSCAFG00000000587 I 0.736
GRHL2 Ornithorhynchus anatinus ENSOANG00000004305 I 0.736
GRHL2 Myotis lucifugus ENSMLUG00000010961 I 0.736
ENSSHAG00000015849 Sarcophilus harrisii ENSSHAG00000015849 I 0.736
grhl2b Takifugu rubripes ENSTRUG00000002119 I 0.735
grhl2b Danio rerio ENSDARG00000061974 I 0.731
GRHL2 Loxodonta africana ENSLAFG00000010356 I 0.731
ENSPPYG00000018794 Pongo abelii ENSPPYG00000018794 I 0.731
ENSGMOG00000003256 Gadus morhua ENSGMOG00000003256 I 0.731
Pvit_03833 Pogona vitticeps Pvit_03833 I 0.731
GRHL2 Gorilla gorilla ENSGGOG00000004401 I 0.731
GRHL2 Homo sapiens ENSG00000083307 D 0.731
ENSLACG00000006172 Latimeria chalumnae ENSLACG00000006172 I 0.731
ENSCSAG00000011989 Chlorocebus sabaeus ENSCSAG00000011989 I 0.731
GRHL2 Cavia porcellus ENSCPOG00000005630 I 0.731
GRHL2 Sus scrofa ENSSSCG00000006060 I 0.731
ENSPANG00000017807 Papio anubis ENSPANG00000017807 I 0.731
ENSNLEG00000003271 Nomascus leucogenys ENSNLEG00000003271 I 0.731
GRHL2 Callithrix jacchus ENSCJAG00000015886 I 0.731
GRHL2 Pan troglodytes ENSPTRG00000020479 I 0.731
Grhl2 Rattus norvegicus ENSRNOG00000007000 I 0.731
GRHL2 Microcebus murinus ENSMICG00000014771 I 0.726
ENSAPLG00000002882 Anas platyrhynchos ENSAPLG00000002882 I 0.726
ENSGALG00000014208 Gallus gallus ENSGALG00000014208 I 0.726
Gfo_R006019 Geospiza fortis Gfo_R006019 I 0.722
ENSONIG00000002710 Oreochromis niloticus ENSONIG00000002710 I 0.717
ENSLOCG00000009655 Lepisosteus oculatus ENSLOCG00000009655 I 0.712
ENSP00000379261 Macaca fascicularis ENSP00000379261 I 0.710
GRHL2 Macaca mulatta ENSMMUG00000020995 I 0.710
ENSPFOG00000006095 Poecilia formosa ENSPFOG00000006095 I 0.703
grhl2b Tetraodon nigroviridis ENSTNIG00000009151 I 0.703
ENSXMAG00000003725 Xiphophorus maculatus ENSXMAG00000003725 I 0.703
ENSSTOG00000001498 Ictidomys tridecemlineatus ENSSTOG00000001498 I 0.701