Gfo_R015266 (Geospiza fortis)
Grainyhead

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF04516 (CP2) IPR007604 Gfo_R015266 T199538_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GRHL1
M03071_2.00 		Homo sapiens
RACYKGWHNDWCMGGTT
AACCKGWHNDWCMRGTY		 SELEX
Jolma et al.(2013)
GRHL1_1 		0.931 0.931
GRHL1
M03072_2.00 		Homo sapiens
DAACCGGTTH
DAACCGGTTH		 SELEX
Jolma et al.(2013)
GRHL1_2 		0.931 0.931
GRHL1
M03073_2.00 		Homo sapiens
HWAACCGGTTTD
HAAACCGGTTWD		 SELEX
Jolma et al.(2013)
GRHL1_3 		0.931 0.931
GRHL1
M04887_2.00 		Homo sapiens
DAACCGGTTH
DAACCGGTTH		 SELEX
Yin et al.(2017)
GRHL1_eDBD_HT-SELEX 		0.931 0.931
GRHL1
M04888_2.00 		Homo sapiens
DAACMKGTTH
DAACMKGTTH		 SELEX
Yin et al.(2017)
GRHL1_eDBD_Methyl-HT-SELEX 		0.931 0.931
GRHL2
M08129_2.00 		Homo sapiens
NNNAACTGGTTTNNN
NNNAAACCAGTTNNN		 ChIP-seq
Mathelier et al.(2014)
MA1105.1 		0.728 0.728
GRHL2
M09125_2.00 		Homo sapiens
AACYDGYYBDDC
GHHVRRCHRGTT		 Misc
Kulakovskiy et al.(2013)
GRHL2_HUMAN.H11MO.0.A 		0.728 0.728
GRHL2
M09558_2.00 		Homo sapiens
NRAACHDGHHDDDCHDGTTY
RAACHDGHHHDDCHDGTTYN		 Misc
Heinz et al.(2010)
HBE-GRHL2_GSE46194 		0.728 0.728
Grhl2
M09126_2.00 		Mus musculus
RDCCDGTYYKDC
GHMRRACHGGHY		 Misc
Kulakovskiy et al.(2013)
GRHL2_MOUSE.H11MO.0.A 		0.724 0.724
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gfo_R015266 Grainyhead 222 438

Links

Other Grainyhead family TFs
Other Geospiza fortis TFs

114 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSFALG00000006639 Ficedula albicollis ENSFALG00000006639 I 1.000
GRHL1 Taeniopygia guttata ENSTGUG00000013038 I 0.995
Afo_R015753 Aptenodytes forsteri Afo_R015753 I 0.995
Tal_R012680 Tyto alba Tal_R012680 I 0.995
ENSAPLG00000008667 Anas platyrhynchos ENSAPLG00000008667 I 0.986
GRHL1 Meleagris gallopavo ENSMGAG00000014007 I 0.986
ENSGALG00000016439 Gallus gallus ENSGALG00000016439 I 0.986
GRHL1 Dasypus novemcinctus ENSDNOG00000014493 I 0.962
GRHL1 Macaca mulatta ENSMMUG00000001535 I 0.962
ENSMMUP00000002046 Macaca fascicularis ENSMMUP00000002046 I 0.962
ENSCSAG00000007158 Chlorocebus sabaeus ENSCSAG00000007158 I 0.962
ENSNLEG00000013634 Nomascus leucogenys ENSNLEG00000013634 I 0.962
ENSSTOG00000019842 Ictidomys tridecemlineatus ENSSTOG00000019842 I 0.959
ENSSHAG00000002291 Sarcophilus harrisii ENSSHAG00000002291 I 0.958
GRHL1 Vicugna pacos ENSVPAG00000010842 I 0.957
Ogr04284 Ophisaurus gracilis Ogr04284 I 0.954
GRHL1 Equus caballus ENSECAG00000015969 I 0.953
GRHL1 Pan troglodytes ENSPTRG00000011643 I 0.953
ENSPANG00000020814 Papio anubis ENSPANG00000020814 I 0.953
ENSPPYG00000012661 Pongo abelii ENSPPYG00000012661 I 0.953
GRHL1 Canis familiaris ENSCAFG00000003394 I 0.948
ENSOARG00000015298 Ovis aries ENSOARG00000015298 I 0.948
ENSMPUG00000013263 Mustela putorius furo ENSMPUG00000013263 I 0.948
GRHL1 Loxodonta africana ENSLAFG00000009330 I 0.948
GRHL1 Monodelphis domestica ENSMODG00000014753 I 0.945
GRHL1 Myotis lucifugus ENSMLUG00000002290 I 0.945
GRHL1 Gorilla gorilla ENSGGOG00000002692 I 0.945
ENSSTOG00000002434 Ictidomys tridecemlineatus ENSSTOG00000002434 I 0.944
ENSAMEG00000011320 Ailuropoda melanoleuca ENSAMEG00000011320 I 0.944
GRHL1 Homo sapiens ENSG00000134317 D 0.940
GRHL1 Cavia porcellus ENSCPOG00000010783 I 0.934
GRHL1 Felis catus ENSFCAG00000007856 I 0.934
Myotis_brandtii_GRHL1_10020834 Myotis brandtii Myotis_brandtii_GRHL1_10020834 I 0.931
GRHL1 Callithrix jacchus ENSCJAG00000006431 I 0.931
GRHL1 Ornithorhynchus anatinus ENSOANG00000007788 I 0.931
GRHL1 Otolemur garnettii ENSOGAG00000014342 I 0.931
GRHL1 Pteropus vampyrus ENSPVAG00000002002 I 0.931
Grhl1 Mus musculus ENSMUSG00000020656 I 0.930
grhl1.L Xenopus laevis XB-GENE-486580 I 0.929
GRHL1 Anolis carolinensis ENSACAG00000000132 I 0.926
XP_002938935 Xenopus tropicalis XP_002938935 I 0.925
grhl1 Danio rerio ENSDARG00000061391 I 0.923
GRHL1 Bos taurus ENSBTAG00000007485 I 0.922
ENSP00000384209-D1 Bos grunniens ENSP00000384209-D1 I 0.922
GRHL1 Oryctolagus cuniculus ENSOCUG00000017717 I 0.912
XP_002938936 Xenopus tropicalis XP_002938936 I 0.894
Aan_R015393 Calypte anna Aan_R015393 I 0.894
Brh_R003016 Buceros rhinoceros Brh_R003016 I 0.885
ENSPSIG00000010930 Pelodiscus sinensis ENSPSIG00000010930 I 0.866
Alligator_sinensis_CCG017490.1 Alligator sinensis Alligator_sinensis_CCG017490.1 I 0.855
ENSPMAG00000005876 Petromyzon marinus ENSPMAG00000005876 I 0.838
Pvit_14440 Pogona vitticeps Pvit_14440 I 0.820
Grhl1 Rattus norvegicus ENSRNOG00000054989 I 0.811
ENSTSYG00000004124 Tarsius syrichta ENSTSYG00000004124 I 0.811
ENSLOCG00000016835 Lepisosteus oculatus ENSLOCG00000016835 I 0.806
grhl1 Takifugu rubripes ENSTRUG00000013628 I 0.793
ENSONIG00000003707 Oreochromis niloticus ENSONIG00000003707 I 0.788
grhl1 Oryzias latipes ENSORLG00000015232 I 0.788
ENSPFOG00000004774 Poecilia formosa ENSPFOG00000004774 I 0.783
grhl1 Gasterosteus aculeatus ENSGACG00000008845 I 0.783
ENSXMAG00000013267 Xiphophorus maculatus ENSXMAG00000013267 I 0.779
grhl1 Tetraodon nigroviridis ENSTNIG00000017317 I 0.771
ENSGMOG00000003256 Gadus morhua ENSGMOG00000003256 I 0.760
ENSPMAG00000005869 Petromyzon marinus ENSPMAG00000005869 I 0.754
ENSAMEG00000000278 Ailuropoda melanoleuca ENSAMEG00000000278 I 0.747
ENSMPUG00000015153 Mustela putorius furo ENSMPUG00000015153 I 0.747
GRHL2 Tursiops truncatus ENSTTRG00000005794 I 0.742
GRHL2 Bos taurus ENSBTAG00000004518 I 0.742
ENSOARG00000018325 Ovis aries ENSOARG00000018325 I 0.742
ENSP00000251808-D1 Bos grunniens ENSP00000251808-D1 I 0.742
GRHL2 Canis familiaris ENSCAFG00000000587 I 0.729
grhl2 Xenopus tropicalis XB-GENE-485995 I 0.728
GRHL2 Meleagris gallopavo ENSMGAG00000012259 I 0.728
GRHL2 Homo sapiens ENSG00000083307 D 0.728
ENSCSAG00000011989 Chlorocebus sabaeus ENSCSAG00000011989 I 0.728
GRHL2 Callithrix jacchus ENSCJAG00000015886 I 0.728
GRHL2 Myotis lucifugus ENSMLUG00000010961 I 0.728
Myotis_brandtii_GRHL2_10032153 Myotis brandtii Myotis_brandtii_GRHL2_10032153 I 0.728
ENSPANG00000017807 Papio anubis ENSPANG00000017807 I 0.728
GRHL2 Pan troglodytes ENSPTRG00000020479 I 0.728
ENSNLEG00000003271 Nomascus leucogenys ENSNLEG00000003271 I 0.728
ENSPSIG00000003669 Pelodiscus sinensis ENSPSIG00000003669 I 0.724
GRHL2 Loxodonta africana ENSLAFG00000010356 I 0.724
GRHL2 Microcebus murinus ENSMICG00000014771 I 0.724
Pvit_03833 Pogona vitticeps Pvit_03833 I 0.724
ENSSHAG00000015849 Sarcophilus harrisii ENSSHAG00000015849 I 0.724
ENSP00000379261 Macaca fascicularis ENSP00000379261 I 0.723
GRHL2 Macaca mulatta ENSMMUG00000020995 I 0.723
GRHL2 Felis catus ENSFCAG00000004963 I 0.720
ENSAPLG00000002882 Anas platyrhynchos ENSAPLG00000002882 I 0.719
ENSLACG00000006172 Latimeria chalumnae ENSLACG00000006172 I 0.719
GRHL2 Otolemur garnettii ENSOGAG00000004751 I 0.719
ENSGALG00000014208 Gallus gallus ENSGALG00000014208 I 0.719
GRHL2 Cavia porcellus ENSCPOG00000005630 I 0.718
GRHL2 Dasypus novemcinctus ENSDNOG00000048641 I 0.716
GRHL2 Equus caballus ENSECAG00000013681 I 0.716
ENSSTOG00000001498 Ictidomys tridecemlineatus ENSSTOG00000001498 I 0.715
ENSONIG00000002710 Oreochromis niloticus ENSONIG00000002710 I 0.714
GRHL2 Sus scrofa ENSSSCG00000006060 I 0.712
Gfo_R006019 Geospiza fortis Gfo_R006019 I 0.711
GRHL2 Oryctolagus cuniculus ENSOCUG00000004750 I 0.711
ENSTGUG00000012086 Taeniopygia guttata ENSTGUG00000012086 I 0.710
grhl2b Danio rerio ENSDARG00000061974 I 0.709
GRHL2 Ornithorhynchus anatinus ENSOANG00000004305 I 0.709
GRHL2 Gorilla gorilla ENSGGOG00000004401 I 0.709
Grhl2 Mus musculus ENSMUSG00000022286 D 0.707
Grhl2 Rattus norvegicus ENSRNOG00000007000 I 0.707
GRHL2 Monodelphis domestica ENSMODG00000006048 I 0.707
ENSPFOG00000006095 Poecilia formosa ENSPFOG00000006095 I 0.705
Afo_R002230 Aptenodytes forsteri Afo_R002230 I 0.703
ENSFALG00000005879 Ficedula albicollis ENSFALG00000005879 I 0.703
Aan_R003923 Calypte anna Aan_R003923 I 0.703
Brh_R013325 Buceros rhinoceros Brh_R013325 I 0.703
ENSPPYG00000018794 Pongo abelii ENSPPYG00000018794 I 0.701