CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SapurV1A.0030s0420
(
Salix purpurea
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
SapurV1A.0030s0420
T203109_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SapurV1A.0030s0420.1.p
GRAS
163
533
LKEALCTCALAISNSDMFTVEWLMSELRQMVSVTGEPIQRLGAYMLEGLVARLASSGSSIYKALRCKEPAGADLLSYMHLLYEVCPYFKFGYMSANGAIADAVKDEISVHIIDFQIAQGSQWVTLLQALAARPGGPPHIRITGIDDSTSAYARGGGLDIVGKRLLKLAESYKVPFEFHAAGVSASEIQVENLGVQPGEAVVVNFALSLHHLPDGSVGTQNHRDRLLRLVKSLSPKVVTLIEQESNTSTVPFFARFVETLNYYQAIFESIDVTLPREHKERINVEQHCLAREVVNIIACEGAERVERHEHLGKWISRFEMAGFTPYPLSSFVNFTIKTLLQNYSEKYTLEERDGALFLGWMNRPLVAACAWR
SapurV1A.0030s0420.2.p
GRAS
163
533
LKEALCTCALAISNSDMFTVEWLMSELRQMVSVTGEPIQRLGAYMLEGLVARLASSGSSIYKALRCKEPAGADLLSYMHLLYEVCPYFKFGYMSANGAIADAVKDEISVHIIDFQIAQGSQWVTLLQALAARPGGPPHIRITGIDDSTSAYARGGGLDIVGKRLLKLAESYKVPFEFHAAGVSASEIQVENLGVQPGEAVVVNFALSLHHLPDGSVGTQNHRDRLLRLVKSLSPKVVTLIEQESNTSTVPFFARFVETLNYYQAIFESIDVTLPREHKERINVEQHCLAREVVNIIACEGAERVERHEHLGKWISRFEMAGFTPYPLSSFVNFTIKTLLQNYSEKYTLEERDGALFLGWMNRPLVAACAWR
Links
Other
GRAS
family TFs
Other
Salix purpurea
TFs
85 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SCL5
Populus trichocarpa
POPTR_0001s37270
N
0.924
cassava10826.m1
Manihot esculenta
cassava10826.m1
N
0.846
cassava34699.m1
Manihot esculenta
cassava34699.m1
N
0.843
27613.m000642
Ricinus communis
27613.m000642
N
0.840
Lus10016596.g
Linum usitatissimum
Lus10016596.g
N
0.813
Pm012019
Prunus mume
Pm012019
N
0.805
Gorai.007G167000
Gossypium raimondii
Gorai.007G167000
N
0.805
TCM_002319
Theobroma cacao
TCM_002319
N
0.802
TCM_030733
Theobroma cacao
TCM_030733
N
0.802
Gorai.001G192800
Gossypium raimondii
Gorai.001G192800
N
0.799
VIT_12s0057g00560
Vitis vinifera
VIT_12s0057g00560
N
0.797
GLYMA14G01020
Glycine max
GLYMA14G01020
N
0.797
gene21592-v1.0-hybrid
Fragaria vesca
gene21592-v1.0-hybrid
N
0.794
Pm015021
Prunus mume
Pm015021
N
0.791
PRUPE_ppa003702mg
Prunus persica
PRUPE_ppa003702mg
N
0.789
evm.TU.supercontig_136.17
Carica papaya
evm.TU.supercontig_136.17
N
0.789
MDP0000804652
Malus domestica
MDP0000804652
N
0.789
SapurV1A.0054s0160
Salix purpurea
SapurV1A.0054s0160
N
0.786
POPTR_0014s16230
Populus trichocarpa
POPTR_0014s16230
N
0.786
gene03551-v1.0-hybrid
Fragaria vesca
gene03551-v1.0-hybrid
N
0.783
MDP0000152670
Malus domestica
MDP0000152670
N
0.783
GLYMA02G47640
Glycine max
GLYMA02G47640
N
0.783
Aquca_005_00234
Aquilegia coerulea
Aquca_005_00234
N
0.780
SCL5
Vitis vinifera
VIT_19s0090g01740
N
0.780
PRUPE_ppa004136mg
Prunus persica
PRUPE_ppa004136mg
N
0.778
evm.TU.supercontig_12.194
Carica papaya
evm.TU.supercontig_12.194
N
0.778
Ca_09786
Cicer arietinum
Ca_09786
N
0.775
orange1.1g009376m.g
Citrus sinensis
orange1.1g009376m.g
N
0.772
Gorai.009G446100
Gossypium raimondii
Gorai.009G446100
N
0.772
MTR_5g097480
Medicago truncatula
MTR_5g097480
N
0.772
Solyc07g047950.1
Solanum lycopersicum
Solyc07g047950.1
N
0.770
Eucgr.A01051
Eucalyptus grandis
Eucgr.A01051
N
0.770
Ciclev10014845m.g
Citrus clementina
Ciclev10014845m.g
N
0.770
MDP0000205236
Malus domestica
MDP0000205236
N
0.770
MDP0000284679
Malus domestica
MDP0000284679
N
0.770
Gorai.002G096300
Gossypium raimondii
Gorai.002G096300
N
0.764
Cucsa.120390
Cucumis sativus
Cucsa.120390
N
0.764
Ciclev10007927m.g
Citrus clementina
Ciclev10007927m.g
N
0.764
PGSC0003DMG400006132
Solanum tuberosum
PGSC0003DMG400006132
N
0.764
Cla001429
Citrullus lanatus
Cla001429
N
0.764
Carubv10026289m.g
Capsella rubella
Carubv10026289m.g
N
0.756
Cagra.2766s0005
Capsella grandiflora
Cagra.2766s0005
N
0.756
PAT1
Arabidopsis thaliana
AT5G48150
N
0.756
Solyc07g065270.1
Solanum lycopersicum
Solyc07g065270.1
N
0.753
PK09018.1
Cannabis sativa
PK09018.1
N
0.753
Eucgr.F03523
Eucalyptus grandis
Eucgr.F03523
N
0.751
PDK_20s1411471g003
Phoenix dactylifera
PDK_20s1411471g003
N
0.751
Bostr.5224s0004
Boechera stricta
Bostr.5224s0004
N
0.748
PK15082.1
Cannabis sativa
PK15082.1
N
0.745
Cla004565
Citrullus lanatus
Cla004565
N
0.745
PGSC0003DMG400022187
Solanum tuberosum
PGSC0003DMG400022187
N
0.745
PAT1
Arabidopsis lyrata
scaffold_801100.1
N
0.743
Bo2g149670
Brassica oleracea
Bo2g149670
N
0.740
Bra020715
Brassica rapa
Bra020715
N
0.740
Lus10012323.g
Linum usitatissimum
Lus10012323.g
N
0.734
Cucsa.042310
Cucumis sativus
Cucsa.042310
N
0.734
Thhalv10004053m.g
Eutrema salsugineum
Thhalv10004053m.g
N
0.732
Bra036185
Brassica rapa
Bra036185
N
0.732
Bo9g009260
Brassica oleracea
Bo9g009260
N
0.732
GLYMA02G46730
Glycine max
GLYMA02G46730
N
0.729
GLYMA14G01960
Glycine max
GLYMA14G01960
N
0.729
Bo7g089080
Brassica oleracea
Bo7g089080
N
0.729
29949.m000124
Ricinus communis
29949.m000124
N
0.726
Aquca_028_00248
Aquilegia coerulea
Aquca_028_00248
N
0.726
cassava34106.m1
Manihot esculenta
cassava34106.m1
N
0.724
MTR_5g094450
Medicago truncatula
MTR_5g094450
N
0.724
Bostr.26675s0117
Boechera stricta
Bostr.26675s0117
N
0.721
Bo6g022330
Brassica oleracea
Bo6g022330
N
0.721
SCL5
Arabidopsis lyrata
fgenesh2_kg.1__4145__AT1G50600.1
N
0.721
Bra018860
Brassica rapa
Bra018860
N
0.721
cassava8885.m1
Manihot esculenta
cassava8885.m1
N
0.721
SCL5
Arabidopsis thaliana
AT1G50600
N
0.721
Carubv10008830m.g
Capsella rubella
Carubv10008830m.g
N
0.715
Ca_13855
Cicer arietinum
Ca_13855
N
0.715
Cagra.7055s0004
Capsella grandiflora
Cagra.7055s0004
N
0.715
Thhalv10011379m.g
Eutrema salsugineum
Thhalv10011379m.g
N
0.713
GLYMA18G09030
Glycine max
GLYMA18G09030
N
0.710
AMTR_s00088p00161000
Amborella trichopoda
AMTR_s00088p00161000
N
0.710
chr6.LjT11E14.20.nc
Lotus japonicus
chr6.LjT11E14.20.nc
N
0.707
Bra037509
Brassica rapa
Bra037509
N
0.707
Lus10006369.g
Linum usitatissimum
Lus10006369.g
N
0.705
MTR_3g056110
Medicago truncatula
MTR_3g056110
N
0.702
Traes_2BS_D007D6598
Triticum aestivum
Traes_2BS_D007D6598
N
0.702
GLYMA08G43780
Glycine max
GLYMA08G43780
N
0.702