Gorai.001G192800 (Gossypium raimondii)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03514 (GRAS) IPR005202 Gorai.001G192800 T202601_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.001G192800.1 GRAS 161 531

Links

Other GRAS family TFs
Other Gossypium raimondii TFs

121 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TCM_002319 Theobroma cacao TCM_002319 N 0.957
Gorai.007G167000 Gossypium raimondii Gorai.007G167000 N 0.943
VIT_12s0057g00560 Vitis vinifera VIT_12s0057g00560 N 0.902
POPTR_0014s16230 Populus trichocarpa POPTR_0014s16230 N 0.902
SapurV1A.0054s0160 Salix purpurea SapurV1A.0054s0160 N 0.902
PRUPE_ppa003702mg Prunus persica PRUPE_ppa003702mg N 0.902
Pm015021 Prunus mume Pm015021 N 0.900
gene21592-v1.0-hybrid Fragaria vesca gene21592-v1.0-hybrid N 0.897
GLYMA14G01020 Glycine max GLYMA14G01020 N 0.894
MDP0000804652 Malus domestica MDP0000804652 N 0.889
MDP0000152670 Malus domestica MDP0000152670 N 0.889
evm.TU.supercontig_136.17 Carica papaya evm.TU.supercontig_136.17 N 0.889
GLYMA02G47640 Glycine max GLYMA02G47640 N 0.886
MTR_5g097480 Medicago truncatula MTR_5g097480 N 0.881
Ca_09786 Cicer arietinum Ca_09786 N 0.870
orange1.1g009376m.g Citrus sinensis orange1.1g009376m.g N 0.867
Ciclev10014845m.g Citrus clementina Ciclev10014845m.g N 0.862
Eucgr.A01051 Eucalyptus grandis Eucgr.A01051 N 0.859
Cla001429 Citrullus lanatus Cla001429 N 0.856
Cucsa.120390 Cucumis sativus Cucsa.120390 N 0.848
Solyc07g047950.1 Solanum lycopersicum Solyc07g047950.1 N 0.846
PGSC0003DMG400006132 Solanum tuberosum PGSC0003DMG400006132 N 0.846
Lus10012323.g Linum usitatissimum Lus10012323.g N 0.837
PK09018.1 Cannabis sativa PK09018.1 N 0.837
PAT1 Arabidopsis thaliana AT5G48150 N 0.835
Aquca_005_00234 Aquilegia coerulea Aquca_005_00234 N 0.829
Cagra.2766s0005 Capsella grandiflora Cagra.2766s0005 N 0.827
Carubv10026289m.g Capsella rubella Carubv10026289m.g N 0.827
cassava10826.m1 Manihot esculenta cassava10826.m1 N 0.824
PAT1 Arabidopsis lyrata scaffold_801100.1 N 0.821
Bostr.5224s0004 Boechera stricta Bostr.5224s0004 N 0.821
27613.m000642 Ricinus communis 27613.m000642 N 0.818
Bra020715 Brassica rapa Bra020715 N 0.818
Bo9g009260 Brassica oleracea Bo9g009260 N 0.816
Bra036185 Brassica rapa Bra036185 N 0.816
SCL5 Vitis vinifera VIT_19s0090g01740 N 0.816
Bo2g149670 Brassica oleracea Bo2g149670 N 0.816
cassava34106.m1 Manihot esculenta cassava34106.m1 N 0.813
Thhalv10004053m.g Eutrema salsugineum Thhalv10004053m.g N 0.810
cassava34699.m1 Manihot esculenta cassava34699.m1 N 0.810
Lus10006369.g Linum usitatissimum Lus10006369.g N 0.808
TCM_030733 Theobroma cacao TCM_030733 N 0.805
Pm012019 Prunus mume Pm012019 N 0.802
cassava8885.m1 Manihot esculenta cassava8885.m1 N 0.802
SapurV1A.0030s0420 Salix purpurea SapurV1A.0030s0420 N 0.799
Aquca_028_00248 Aquilegia coerulea Aquca_028_00248 N 0.799
Bo7g089080 Brassica oleracea Bo7g089080 N 0.797
29949.m000124 Ricinus communis 29949.m000124 N 0.797
SCL5 Populus trichocarpa POPTR_0001s37270 N 0.789
gene03551-v1.0-hybrid Fragaria vesca gene03551-v1.0-hybrid N 0.789
Ciclev10007927m.g Citrus clementina Ciclev10007927m.g N 0.786
Lus10016596.g Linum usitatissimum Lus10016596.g N 0.783
Gorai.009G446100 Gossypium raimondii Gorai.009G446100 N 0.780
MDP0000205236 Malus domestica MDP0000205236 N 0.778
MDP0000284679 Malus domestica MDP0000284679 N 0.778
Gorai.002G096300 Gossypium raimondii Gorai.002G096300 N 0.775
PRUPE_ppa004136mg Prunus persica PRUPE_ppa004136mg N 0.775
Bra037509 Brassica rapa Bra037509 N 0.772
Solyc07g065270.1 Solanum lycopersicum Solyc07g065270.1 N 0.772
PGSC0003DMG400022187 Solanum tuberosum PGSC0003DMG400022187 N 0.770
Bostr.19424s0023 Boechera stricta Bostr.19424s0023 N 0.764
evm.TU.supercontig_12.194 Carica papaya evm.TU.supercontig_12.194 N 0.759
PDK_20s1411471g003 Phoenix dactylifera PDK_20s1411471g003 N 0.756
PK15082.1 Cannabis sativa PK15082.1 N 0.753
SCL21 Arabidopsis thaliana AT2G04890 N 0.753
AMTR_s00088p00161000 Amborella trichopoda AMTR_s00088p00161000 N 0.753
SCL21 Arabidopsis lyrata scaffold_303269.1 N 0.751
Eucgr.F03523 Eucalyptus grandis Eucgr.F03523 N 0.751
Cla004565 Citrullus lanatus Cla004565 N 0.745
Thhalv10002541m.g Eutrema salsugineum Thhalv10002541m.g N 0.743
Carubv10015685m.g Capsella rubella Carubv10015685m.g N 0.740
Cagra.1158s0007 Capsella grandiflora Cagra.1158s0007 N 0.737
Bo7g030310 Brassica oleracea Bo7g030310 N 0.734
SCL5 Arabidopsis lyrata fgenesh2_kg.1__4145__AT1G50600.1 N 0.729
SCL5 Arabidopsis thaliana AT1G50600 N 0.729
Bra018860 Brassica rapa Bra018860 N 0.724
Bo6g022330 Brassica oleracea Bo6g022330 N 0.724
Bostr.26675s0117 Boechera stricta Bostr.26675s0117 N 0.724
Cucsa.042310 Cucumis sativus Cucsa.042310 N 0.724
OMERI10G05450 Oryza meridionalis OMERI10G05450 N 0.721
Thhalv10011379m.g Eutrema salsugineum Thhalv10011379m.g N 0.721
Carubv10008830m.g Capsella rubella Carubv10008830m.g N 0.721
Cagra.7055s0004 Capsella grandiflora Cagra.7055s0004 N 0.721
SCL13 Vitis vinifera VIT_00s0463g00020 N 0.718
GLYMA02G46730 Glycine max GLYMA02G46730 N 0.718
OGLUM10G07400 Oryza glumaepatula OGLUM10G07400 N 0.718
OBART10G07700 Oryza barthii OBART10G07700 N 0.718
ORGLA10G0063900 Oryza glaberrima ORGLA10G0063900 N 0.718
ORUFI10G08100 Oryza rufipogon ORUFI10G08100 N 0.718
OLONG_015869 Oryza longistaminata OLONG_015869 N 0.715
Pavir.Ba00562 Panicum virgatum Pavir.Ba00562 N 0.715
GLYMA14G01960 Glycine max GLYMA14G01960 N 0.715
BRADI1G23350 Brachypodium distachyon BRADI1G23350 N 0.715
BGIOSGA032058 Oryza indica BGIOSGA032058 N 0.715
Ca_13855 Cicer arietinum Ca_13855 N 0.713
Traes_2BS_D007D6598 Triticum aestivum Traes_2BS_D007D6598 N 0.713
OPUNC10G06730 Oryza punctata OPUNC10G06730 N 0.713
ONIVA10G07150 Oryza nivara ONIVA10G07150 N 0.713
Si029418m.g Setaria italica Si029418m.g N 0.710
mgf013039m Mimulus guttatus mgf013039m N 0.710
MTR_5g094450 Medicago truncatula MTR_5g094450 N 0.710
TCM_030393 Theobroma cacao TCM_030393 N 0.707
MLOC_65838 Hordeum vulgare MLOC_65838 N 0.707
Si035052m.g Setaria italica Si035052m.g N 0.707
OPUNC07G19030 Oryza punctata OPUNC07G19030 N 0.707
MTR_3g056110 Medicago truncatula MTR_3g056110 N 0.707
OMERI07G16830 Oryza meridionalis OMERI07G16830 N 0.707
BGIOSGA026022 Oryza indica BGIOSGA026022 N 0.705
Pavir.Ia02739 Panicum virgatum Pavir.Ia02739 N 0.705
chr6.LjT11E14.20.nc Lotus japonicus chr6.LjT11E14.20.nc N 0.705
ORUFI07G20980 Oryza rufipogon ORUFI07G20980 N 0.705
OGLUM07G19910 Oryza glumaepatula OGLUM07G19910 N 0.705
ONIVA07G18570 Oryza nivara ONIVA07G18570 N 0.705
OB10G15940 Oryza brachyantha OB10G15940 N 0.705
ORGLA07G0258500 Oryza glaberrima ORGLA07G0258500 N 0.705
CIGR2 Oryza sativa OS07G0583600 N 0.705
LPERR10G05390 Leersia perrieri LPERR10G05390 N 0.702
GRMZM2G431309 Zea mays GRMZM2G431309 N 0.702
GLYMA08G43780 Glycine max GLYMA08G43780 N 0.702
OBART07G20130 Oryza barthii OBART07G20130 N 0.702
OB07G25870 Oryza brachyantha OB07G25870 N 0.702