Pm012019 (Prunus mume)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03514 (GRAS) IPR005202 Pm012019 T201964_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pm012019 GRAS 168 538

Links

Other GRAS family TFs
Other Prunus mume TFs

112 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PRUPE_ppa004136mg Prunus persica PRUPE_ppa004136mg N 0.943
MDP0000284679 Malus domestica MDP0000284679 N 0.905
MDP0000205236 Malus domestica MDP0000205236 N 0.905
gene03551-v1.0-hybrid Fragaria vesca gene03551-v1.0-hybrid N 0.875
27613.m000642 Ricinus communis 27613.m000642 N 0.835
cassava34699.m1 Manihot esculenta cassava34699.m1 N 0.827
SCL5 Vitis vinifera VIT_19s0090g01740 N 0.824
cassava10826.m1 Manihot esculenta cassava10826.m1 N 0.824
TCM_030733 Theobroma cacao TCM_030733 N 0.818
Gorai.002G096300 Gossypium raimondii Gorai.002G096300 N 0.813
Gorai.009G446100 Gossypium raimondii Gorai.009G446100 N 0.810
VIT_12s0057g00560 Vitis vinifera VIT_12s0057g00560 N 0.808
evm.TU.supercontig_136.17 Carica papaya evm.TU.supercontig_136.17 N 0.808
Gorai.007G167000 Gossypium raimondii Gorai.007G167000 N 0.805
SapurV1A.0030s0420 Salix purpurea SapurV1A.0030s0420 N 0.805
GLYMA14G01020 Glycine max GLYMA14G01020 N 0.802
Gorai.001G192800 Gossypium raimondii Gorai.001G192800 N 0.802
TCM_002319 Theobroma cacao TCM_002319 N 0.802
MDP0000152670 Malus domestica MDP0000152670 N 0.799
PRUPE_ppa003702mg Prunus persica PRUPE_ppa003702mg N 0.799
SapurV1A.0054s0160 Salix purpurea SapurV1A.0054s0160 N 0.799
gene21592-v1.0-hybrid Fragaria vesca gene21592-v1.0-hybrid N 0.799
Pm015021 Prunus mume Pm015021 N 0.797
SCL5 Populus trichocarpa POPTR_0001s37270 N 0.797
MDP0000804652 Malus domestica MDP0000804652 N 0.797
Lus10016596.g Linum usitatissimum Lus10016596.g N 0.794
POPTR_0014s16230 Populus trichocarpa POPTR_0014s16230 N 0.794
GLYMA02G47640 Glycine max GLYMA02G47640 N 0.794
MTR_5g097480 Medicago truncatula MTR_5g097480 N 0.791
evm.TU.supercontig_12.194 Carica papaya evm.TU.supercontig_12.194 N 0.789
Ca_09786 Cicer arietinum Ca_09786 N 0.789
Solyc07g047950.1 Solanum lycopersicum Solyc07g047950.1 N 0.789
PGSC0003DMG400006132 Solanum tuberosum PGSC0003DMG400006132 N 0.789
Ciclev10007927m.g Citrus clementina Ciclev10007927m.g N 0.786
29949.m000124 Ricinus communis 29949.m000124 N 0.785
Aquca_005_00234 Aquilegia coerulea Aquca_005_00234 N 0.780
Eucgr.A01051 Eucalyptus grandis Eucgr.A01051 N 0.780
PK09018.1 Cannabis sativa PK09018.1 N 0.775
Eucgr.F03523 Eucalyptus grandis Eucgr.F03523 N 0.775
PK15082.1 Cannabis sativa PK15082.1 N 0.772
orange1.1g009376m.g Citrus sinensis orange1.1g009376m.g N 0.770
Ciclev10014845m.g Citrus clementina Ciclev10014845m.g N 0.764
Cla001429 Citrullus lanatus Cla001429 N 0.756
LjSGA_018703.2 Lotus japonicus LjSGA_018703.2 N 0.755
PAT1 Arabidopsis thaliana AT5G48150 N 0.753
Carubv10026289m.g Capsella rubella Carubv10026289m.g N 0.753
Cagra.2766s0005 Capsella grandiflora Cagra.2766s0005 N 0.753
Solyc07g065270.1 Solanum lycopersicum Solyc07g065270.1 N 0.753
Bostr.26675s0117 Boechera stricta Bostr.26675s0117 N 0.751
Ca_13855 Cicer arietinum Ca_13855 N 0.751
SCL5 Arabidopsis thaliana AT1G50600 N 0.748
SCL5 Arabidopsis lyrata fgenesh2_kg.1__4145__AT1G50600.1 N 0.748
PGSC0003DMG400022187 Solanum tuberosum PGSC0003DMG400022187 N 0.748
Bostr.5224s0004 Boechera stricta Bostr.5224s0004 N 0.748
Bo6g022330 Brassica oleracea Bo6g022330 N 0.745
Bra018860 Brassica rapa Bra018860 N 0.745
Cucsa.120390 Cucumis sativus Cucsa.120390 N 0.745
Cla004565 Citrullus lanatus Cla004565 N 0.743
Aquca_028_00248 Aquilegia coerulea Aquca_028_00248 N 0.743
Lus10012323.g Linum usitatissimum Lus10012323.g N 0.743
GLYMA02G46730 Glycine max GLYMA02G46730 N 0.743
PDK_20s1411471g003 Phoenix dactylifera PDK_20s1411471g003 N 0.743
GLYMA14G01960 Glycine max GLYMA14G01960 N 0.740
Carubv10008830m.g Capsella rubella Carubv10008830m.g N 0.740
PAT1 Arabidopsis lyrata scaffold_801100.1 N 0.740
Cagra.7055s0004 Capsella grandiflora Cagra.7055s0004 N 0.740
Bo7g089080 Brassica oleracea Bo7g089080 N 0.737
chr6.LjT11E14.20.nc Lotus japonicus chr6.LjT11E14.20.nc N 0.737
Thhalv10011379m.g Eutrema salsugineum Thhalv10011379m.g N 0.737
Cucsa.042310 Cucumis sativus Cucsa.042310 N 0.732
Bra020715 Brassica rapa Bra020715 N 0.732
Bo2g149670 Brassica oleracea Bo2g149670 N 0.732
cassava34106.m1 Manihot esculenta cassava34106.m1 N 0.732
Bra036185 Brassica rapa Bra036185 N 0.729
Bo9g009260 Brassica oleracea Bo9g009260 N 0.729
Thhalv10004053m.g Eutrema salsugineum Thhalv10004053m.g N 0.729
GLYMA18G09030 Glycine max GLYMA18G09030 N 0.726
AMTR_s00088p00161000 Amborella trichopoda AMTR_s00088p00161000 N 0.726
GLYMA08G43780 Glycine max GLYMA08G43780 N 0.721
Lus10006369.g Linum usitatissimum Lus10006369.g N 0.721
MTR_5g094450 Medicago truncatula MTR_5g094450 N 0.721
MTR_3g056110 Medicago truncatula MTR_3g056110 N 0.718
GLYMA09G22110 Glycine max GLYMA09G22110 N 0.718
Ca_09696 Cicer arietinum Ca_09696 N 0.715
Pavir.Ba00562 Panicum virgatum Pavir.Ba00562 N 0.713
SCL13 Vitis vinifera VIT_00s0463g00020 N 0.713
Bra037509 Brassica rapa Bra037509 N 0.710
OMERI07G16830 Oryza meridionalis OMERI07G16830 N 0.707
cassava8885.m1 Manihot esculenta cassava8885.m1 N 0.707
OPUNC07G19030 Oryza punctata OPUNC07G19030 N 0.707
OB07G25870 Oryza brachyantha OB07G25870 N 0.705
LPERR07G17460 Leersia perrieri LPERR07G17460 N 0.705
Si035052m.g Setaria italica Si035052m.g N 0.705
BGIOSGA026022 Oryza indica BGIOSGA026022 N 0.705
OGLUM07G19910 Oryza glumaepatula OGLUM07G19910 N 0.705
CIGR2 Oryza sativa OS07G0583600 N 0.705
ORGLA07G0258500 Oryza glaberrima ORGLA07G0258500 N 0.705
ONIVA07G18570 Oryza nivara ONIVA07G18570 N 0.705
ORUFI07G20980 Oryza rufipogon ORUFI07G20980 N 0.705
Pavir.Ia02739 Panicum virgatum Pavir.Ia02739 N 0.702
Traes_2BS_D007D6598 Triticum aestivum Traes_2BS_D007D6598 N 0.702
OBART07G20130 Oryza barthii OBART07G20130 N 0.702
OB10G15940 Oryza brachyantha OB10G15940 N 0.702
GRMZM2G431309 Zea mays GRMZM2G431309 N 0.702
BGIOSGA032058 Oryza indica BGIOSGA032058 N 0.702
OBART10G07700 Oryza barthii OBART10G07700 N 0.702
OGLUM10G07400 Oryza glumaepatula OGLUM10G07400 N 0.702
ORUFI10G08100 Oryza rufipogon ORUFI10G08100 N 0.702
ORGLA10G0063900 Oryza glaberrima ORGLA10G0063900 N 0.702
OMERI10G05450 Oryza meridionalis OMERI10G05450 N 0.702
OLONG_015869 Oryza longistaminata OLONG_015869 N 0.702
Si029418m.g Setaria italica Si029418m.g N 0.702