POPTR_0001s16970 (Populus trichocarpa)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 POPTR_0001s16970 T278186_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0001s16970.1 Myb 18 65
POPTR_0001s16970.1 Myb 71 116

Links

Other Myb/SANT family TFs
Other Populus trichocarpa TFs

114 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SapurV1A.0002s0910 Salix purpurea SapurV1A.0002s0910 N 0.861
SapurV1A.0177s0340 Salix purpurea SapurV1A.0177s0340 N 0.850
SapurV1A.0177s0330 Salix purpurea SapurV1A.0177s0330 N 0.850
SapurV1A.4052s0010 Salix purpurea SapurV1A.4052s0010 N 0.850
Pm013277 Prunus mume Pm013277 N 0.844
PRUPE_ppa024533mg Prunus persica PRUPE_ppa024533mg N 0.840
Cla012784 Citrullus lanatus Cla012784 N 0.839
Cucsa.340790 Cucumis sativus Cucsa.340790 N 0.839
TCM_029126 Theobroma cacao TCM_029126 N 0.837
MDP0000931057 Malus domestica MDP0000931057 N 0.832
Eucgr.F04422 Eucalyptus grandis Eucgr.F04422 N 0.828
Gorai.009G146500 Gossypium raimondii Gorai.009G146500 N 0.823
cassava2804.m1 Manihot esculenta cassava2804.m1 N 0.822
TCM_015933 Theobroma cacao TCM_015933 I 0.822
gene08880-v1.0-hybrid Fragaria vesca gene08880-v1.0-hybrid N 0.822
PRUPE_ppa016135mg Prunus persica PRUPE_ppa016135mg N 0.822
Pm023419 Prunus mume Pm023419 N 0.822
VIT_09s0002g01380 Vitis vinifera VIT_09s0002g01380 N 0.817
Eucgr.F04423 Eucalyptus grandis Eucgr.F04423 N 0.817
POPTR_0003s06320 Populus trichocarpa POPTR_0003s06320 N 0.813
MDP0000124555 Malus domestica MDP0000124555 N 0.813
VIT_04s0008g01870 Vitis vinifera VIT_04s0008g01870 I 0.812
evm.TU.supercontig_25.115 Carica papaya evm.TU.supercontig_25.115 N 0.810
Eucgr.D02099 Eucalyptus grandis Eucgr.D02099 N 0.810
cassava31571.valid.m1 Manihot esculenta cassava31571.valid.m1 N 0.809
MDP0000226215 Malus domestica MDP0000226215 N 0.808
MDP0000253904 Malus domestica MDP0000253904 N 0.808
VIT_00s0341g00050 Vitis vinifera VIT_00s0341g00050 N 0.805
cassava9944.m1 Manihot esculenta cassava9944.m1 I 0.804
Eucgr.C00725 Eucalyptus grandis Eucgr.C00725 I 0.803
Eucgr.B01869 Eucalyptus grandis Eucgr.B01869 I 0.797
Eucgr.E00407 Eucalyptus grandis Eucgr.E00407 N 0.795
GLYMA17G15270 Glycine max GLYMA17G15270 I 0.795
gene07418-v1.0-hybrid Fragaria vesca gene07418-v1.0-hybrid N 0.792
MDP0000143276 Malus domestica MDP0000143276 I 0.790
MDP0000133817 Malus domestica MDP0000133817 I 0.790
Eucgr.B01964 Eucalyptus grandis Eucgr.B01964 I 0.789
TCM_037383 Theobroma cacao TCM_037383 I 0.789
cassava33302.m1 Manihot esculenta cassava33302.m1 I 0.788
POPTR_0018s08500 Populus trichocarpa POPTR_0018s08500 N 0.787
Gorai.004G196800 Gossypium raimondii Gorai.004G196800 N 0.779
POPTR_0006s23780 Populus trichocarpa POPTR_0006s23780 I 0.773
SapurV1A.0710s0030 Salix purpurea SapurV1A.0710s0030 I 0.773
SapurV1A.1360s0110 Salix purpurea SapurV1A.1360s0110 N 0.772
SapurV1A.1087s0090 Salix purpurea SapurV1A.1087s0090 N 0.772
POPTR_0003s07680 Populus trichocarpa POPTR_0003s07680 N 0.771
Ca_12762 Cicer arietinum Ca_12762 N 0.765
GLYMA01G41610 Glycine max GLYMA01G41610 N 0.762
Gorai.009G040800 Gossypium raimondii Gorai.009G040800 N 0.762
evm.TU.supercontig_46.144 Carica papaya evm.TU.supercontig_46.144 N 0.760
PRUPE_ppa026916mg Prunus persica PRUPE_ppa026916mg I 0.757
Pm005577 Prunus mume Pm005577 I 0.757
Ciclev10022303m.g Citrus clementina Ciclev10022303m.g N 0.755
orange1.1g028843m.g Citrus sinensis orange1.1g028843m.g N 0.755
Gorai.009G040900 Gossypium raimondii Gorai.009G040900 N 0.755
SapurV1A.0435s0070 Salix purpurea SapurV1A.0435s0070 N 0.753
GLYMA05G04900 Glycine max GLYMA05G04900 I 0.750
orange1.1g036591m.g Citrus sinensis orange1.1g036591m.g I 0.747
Ciclev10026498m.g Citrus clementina Ciclev10026498m.g I 0.747
MDP0000261265 Malus domestica MDP0000261265 I 0.744
Gorai.012G011700 Gossypium raimondii Gorai.012G011700 N 0.744
mgf018735m Mimulus guttatus mgf018735m N 0.742
Gorai.010G096800 Gossypium raimondii Gorai.010G096800 N 0.735
MTR_4g100720 Medicago truncatula MTR_4g100720 N 0.726
AMTR_s00024p00225650 Amborella trichopoda AMTR_s00024p00225650 N 0.726
GSMUA_Achr3G07950_001 Musa acuminata GSMUA_Achr3G07950_001 I 0.717
GLYMA11G03770 Glycine max GLYMA11G03770 N 0.714
orange1.1g028922m.g Citrus sinensis orange1.1g028922m.g N 0.704
Ciclev10009521m.g Citrus clementina Ciclev10009521m.g N 0.704
SapurV1A.0390s0200 Salix purpurea SapurV1A.0390s0200 I 0.690
SapurV1A.1730s0020 Salix purpurea SapurV1A.1730s0020 I 0.690
PRUPE_ppa017136mg Prunus persica PRUPE_ppa017136mg I 0.689
Pm027048 Prunus mume Pm027048 I 0.689
TRIUR3_09734 Triticum urartu TRIUR3_09734 I 0.687
Eucgr.C00826 Eucalyptus grandis Eucgr.C00826 I 0.687
GSMUA_Achr2G17960_001 Musa acuminata GSMUA_Achr2G17960_001 N 0.685
mgf024953m Mimulus guttatus mgf024953m N 0.685
AMTR_s00030p00146410 Amborella trichopoda AMTR_s00030p00146410 I 0.685
PDK_20s13009436g002 Phoenix dactylifera PDK_20s13009436g002 I 0.684
AMTR_s00024p00224470 Amborella trichopoda AMTR_s00024p00224470 I 0.683
SapurV1A.0102s0340 Salix purpurea SapurV1A.0102s0340 I 0.680
MDP0000887107 Malus domestica MDP0000887107 I 0.678
F775_19148 Aegilops tauschii F775_19148 I 0.677
PDK_20s1554342g001 Phoenix dactylifera PDK_20s1554342g001 I 0.677
Traes_4DL_8A9D9ACCB Triticum aestivum Traes_4DL_8A9D9ACCB I 0.677
Traes_4DL_26A958CDD Triticum aestivum Traes_4DL_26A958CDD I 0.677
gene15383-v1.0-hybrid Fragaria vesca gene15383-v1.0-hybrid N 0.677
F775_17212 Aegilops tauschii F775_17212 I 0.675
MDP0000140609 Malus domestica MDP0000140609 I 0.675
PK05970.1 Cannabis sativa PK05970.1 I 0.673
Pm005573 Prunus mume Pm005573 I 0.673
cassava6228.valid.m1 Manihot esculenta cassava6228.valid.m1 I 0.673
PRUPE_ppa015883mg Prunus persica PRUPE_ppa015883mg I 0.673
POPTR_0017s02990 Populus trichocarpa POPTR_0017s02990 I 0.673
PRUPE_ppa024074mg Prunus persica PRUPE_ppa024074mg I 0.671
Pm027047 Prunus mume Pm027047 I 0.671
TCM_037379 Theobroma cacao TCM_037379 I 0.671
VIT_11s0016g01300 Vitis vinifera VIT_11s0016g01300 I 0.670
GSMUA_Achr11G23500_001 Musa acuminata GSMUA_Achr11G23500_001 N 0.670
AMTR_s00024p00224180 Amborella trichopoda AMTR_s00024p00224180 I 0.669
evm.TU.supercontig_126.30 Carica papaya evm.TU.supercontig_126.30 N 0.669
Gorai.010G087200 Gossypium raimondii Gorai.010G087200 I 0.669
GLYMA13G16890 Glycine max GLYMA13G16890 I 0.669
GLYMA17G05831 Glycine max GLYMA17G05831 I 0.669
GSMUA_Achr6G04400_001 Musa acuminata GSMUA_Achr6G04400_001 I 0.668
cassava2597.m1 Manihot esculenta cassava2597.m1 I 0.668
GSMUA_Achr8G14540_001 Musa acuminata GSMUA_Achr8G14540_001 N 0.667
POPTR_0004s08650 Populus trichocarpa POPTR_0004s08650 I 0.666
MDP0000184538 Malus domestica MDP0000184538 I 0.666
AMTR_s00024p00224850 Amborella trichopoda AMTR_s00024p00224850 I 0.666
cassava25868.m1 Manihot esculenta cassava25868.m1 I 0.665
Aquca_011_00570 Aquilegia coerulea Aquca_011_00570 N 0.664
TCM_019261 Theobroma cacao TCM_019261 I 0.663
GSMUA_Achr10G17610_001 Musa acuminata GSMUA_Achr10G17610_001 I 0.662