cassava2804.m1 (Manihot esculenta)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 cassava2804.m1 T284147_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
cassava2804.m1 Myb 12 59
cassava2804.m1 Myb 65 110

Links

Other Myb/SANT family TFs
Other Manihot esculenta TFs

113 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cucsa.340790 Cucumis sativus Cucsa.340790 N 0.874
Cla012784 Citrullus lanatus Cla012784 N 0.874
cassava31571.valid.m1 Manihot esculenta cassava31571.valid.m1 N 0.874
Eucgr.F04423 Eucalyptus grandis Eucgr.F04423 N 0.873
GLYMA17G15270 Glycine max GLYMA17G15270 I 0.859
Pm023419 Prunus mume Pm023419 N 0.857
PRUPE_ppa016135mg Prunus persica PRUPE_ppa016135mg N 0.857
gene08880-v1.0-hybrid Fragaria vesca gene08880-v1.0-hybrid N 0.857
SapurV1A.0002s0910 Salix purpurea SapurV1A.0002s0910 N 0.855
evm.TU.supercontig_25.115 Carica papaya evm.TU.supercontig_25.115 N 0.855
TCM_015933 Theobroma cacao TCM_015933 I 0.852
SapurV1A.0177s0340 Salix purpurea SapurV1A.0177s0340 N 0.852
SapurV1A.4052s0010 Salix purpurea SapurV1A.4052s0010 N 0.852
SapurV1A.0177s0330 Salix purpurea SapurV1A.0177s0330 N 0.852
Eucgr.D02099 Eucalyptus grandis Eucgr.D02099 N 0.845
MDP0000253904 Malus domestica MDP0000253904 N 0.844
MDP0000226215 Malus domestica MDP0000226215 N 0.844
MDP0000143276 Malus domestica MDP0000143276 I 0.842
MDP0000133817 Malus domestica MDP0000133817 I 0.842
Pm013277 Prunus mume Pm013277 N 0.840
MDP0000124555 Malus domestica MDP0000124555 N 0.839
PRUPE_ppa024533mg Prunus persica PRUPE_ppa024533mg N 0.837
TCM_029126 Theobroma cacao TCM_029126 N 0.837
VIT_09s0002g01380 Vitis vinifera VIT_09s0002g01380 N 0.836
Gorai.009G146500 Gossypium raimondii Gorai.009G146500 N 0.832
Eucgr.F04422 Eucalyptus grandis Eucgr.F04422 N 0.826
gene07418-v1.0-hybrid Fragaria vesca gene07418-v1.0-hybrid N 0.826
VIT_00s0341g00050 Vitis vinifera VIT_00s0341g00050 N 0.823
cassava9944.m1 Manihot esculenta cassava9944.m1 I 0.822
POPTR_0001s16970 Populus trichocarpa POPTR_0001s16970 N 0.822
MDP0000931057 Malus domestica MDP0000931057 N 0.815
GLYMA05G04900 Glycine max GLYMA05G04900 I 0.814
VIT_04s0008g01870 Vitis vinifera VIT_04s0008g01870 I 0.812
Gorai.004G196800 Gossypium raimondii Gorai.004G196800 N 0.810
POPTR_0003s06320 Populus trichocarpa POPTR_0003s06320 N 0.808
Eucgr.B01869 Eucalyptus grandis Eucgr.B01869 I 0.806
TCM_037383 Theobroma cacao TCM_037383 I 0.804
Gorai.009G040900 Gossypium raimondii Gorai.009G040900 N 0.800
Eucgr.E00407 Eucalyptus grandis Eucgr.E00407 N 0.799
Eucgr.B01964 Eucalyptus grandis Eucgr.B01964 I 0.798
Gorai.009G040800 Gossypium raimondii Gorai.009G040800 N 0.796
evm.TU.supercontig_46.144 Carica papaya evm.TU.supercontig_46.144 N 0.794
orange1.1g028843m.g Citrus sinensis orange1.1g028843m.g N 0.794
POPTR_0006s23780 Populus trichocarpa POPTR_0006s23780 I 0.794
SapurV1A.0710s0030 Salix purpurea SapurV1A.0710s0030 I 0.794
Ciclev10022303m.g Citrus clementina Ciclev10022303m.g N 0.794
GLYMA01G41610 Glycine max GLYMA01G41610 N 0.792
Pm005577 Prunus mume Pm005577 I 0.788
cassava33302.m1 Manihot esculenta cassava33302.m1 I 0.788
POPTR_0018s08500 Populus trichocarpa POPTR_0018s08500 N 0.788
PRUPE_ppa026916mg Prunus persica PRUPE_ppa026916mg I 0.788
MTR_4g100720 Medicago truncatula MTR_4g100720 N 0.782
Eucgr.C00725 Eucalyptus grandis Eucgr.C00725 I 0.777
MDP0000261265 Malus domestica MDP0000261265 I 0.774
SapurV1A.1087s0090 Salix purpurea SapurV1A.1087s0090 N 0.772
SapurV1A.1360s0110 Salix purpurea SapurV1A.1360s0110 N 0.772
POPTR_0003s07680 Populus trichocarpa POPTR_0003s07680 N 0.771
Ca_12762 Cicer arietinum Ca_12762 N 0.769
SapurV1A.0435s0070 Salix purpurea SapurV1A.0435s0070 N 0.761
Gorai.012G011700 Gossypium raimondii Gorai.012G011700 N 0.751
GLYMA11G03770 Glycine max GLYMA11G03770 N 0.744
mgf018735m Mimulus guttatus mgf018735m N 0.742
Gorai.010G096800 Gossypium raimondii Gorai.010G096800 N 0.740
mgf024953m Mimulus guttatus mgf024953m N 0.739
orange1.1g036591m.g Citrus sinensis orange1.1g036591m.g I 0.721
Ciclev10026498m.g Citrus clementina Ciclev10026498m.g I 0.721
evm.TU.supercontig_126.30 Carica papaya evm.TU.supercontig_126.30 N 0.712
orange1.1g028922m.g Citrus sinensis orange1.1g028922m.g N 0.708
Ciclev10009521m.g Citrus clementina Ciclev10009521m.g N 0.708
TRIUR3_09734 Triticum urartu TRIUR3_09734 I 0.705
cassava25868.m1 Manihot esculenta cassava25868.m1 I 0.695
F775_19148 Aegilops tauschii F775_19148 I 0.694
Traes_4DL_8A9D9ACCB Triticum aestivum Traes_4DL_8A9D9ACCB I 0.694
Traes_4DL_26A958CDD Triticum aestivum Traes_4DL_26A958CDD I 0.694
Aquca_011_00570 Aquilegia coerulea Aquca_011_00570 N 0.694
AMTR_s00024p00225650 Amborella trichopoda AMTR_s00024p00225650 N 0.693
F775_17212 Aegilops tauschii F775_17212 I 0.692
GSMUA_Achr11G23500_001 Musa acuminata GSMUA_Achr11G23500_001 N 0.691
gene15383-v1.0-hybrid Fragaria vesca gene15383-v1.0-hybrid N 0.678
Pm027048 Prunus mume Pm027048 I 0.676
PRUPE_ppa017136mg Prunus persica PRUPE_ppa017136mg I 0.676
GSMUA_Achr2G17960_001 Musa acuminata GSMUA_Achr2G17960_001 N 0.676
Gorai.007G179300 Gossypium raimondii Gorai.007G179300 I 0.676
PDK_20s13009436g002 Phoenix dactylifera PDK_20s13009436g002 I 0.675
SapurV1A.0120s0010 Salix purpurea SapurV1A.0120s0010 I 0.675
Pm005573 Prunus mume Pm005573 I 0.675
PRUPE_ppa015883mg Prunus persica PRUPE_ppa015883mg I 0.675
VIT_11s0016g01300 Vitis vinifera VIT_11s0016g01300 I 0.674
Eucgr.C00826 Eucalyptus grandis Eucgr.C00826 I 0.674
GSMUA_Achr3G07950_001 Musa acuminata GSMUA_Achr3G07950_001 I 0.674
GSMUA_Achr3G27700_001 Musa acuminata GSMUA_Achr3G27700_001 I 0.673
Si004316m.g Setaria italica Si004316m.g I 0.673
SapurV1A.0918s0130 Salix purpurea SapurV1A.0918s0130 I 0.671
MDP0000140609 Malus domestica MDP0000140609 I 0.671
Gorai.013G114900 Gossypium raimondii Gorai.013G114900 I 0.671
VIT_17s0000g02650 Vitis vinifera VIT_17s0000g02650 I 0.668
POPTR_0001s04240 Populus trichocarpa POPTR_0001s04240 I 0.668
ORGLA01G0227100 Oryza glaberrima ORGLA01G0227100 I 0.667
OS01G0695900 Oryza sativa OS01G0695900 I 0.667
OLONG_002608 Oryza longistaminata OLONG_002608 I 0.667
ORUFI01G30610 Oryza rufipogon ORUFI01G30610 I 0.667
BGIOSGA004260 Oryza indica BGIOSGA004260 I 0.667
GRMZM2G395672 Zea mays GRMZM2G395672 I 0.666
MDP0000887107 Malus domestica MDP0000887107 I 0.665
Gorai.010G087200 Gossypium raimondii Gorai.010G087200 I 0.665
GLYMA13G16890 Glycine max GLYMA13G16890 I 0.665
GLYMA17G05831 Glycine max GLYMA17G05831 I 0.665
LPERR01G23630 Leersia perrieri LPERR01G23630 I 0.664
evm.TU.supercontig_126.33 Carica papaya evm.TU.supercontig_126.33 I 0.662
GSMUA_Achr2G04730_001 Musa acuminata GSMUA_Achr2G04730_001 I 0.662
POPTR_0019s05200 Populus trichocarpa POPTR_0019s05200 I 0.661
POPTR_0019s05210 Populus trichocarpa POPTR_0019s05210 I 0.661
POPTR_0019s05190 Populus trichocarpa POPTR_0019s05190 I 0.661