cassava15064.m1 (Manihot esculenta)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 cassava15064.m1 T284015_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AtMYB40
M07126_2.00 		Arabidopsis thaliana
YYYACCWAMYHHH
DDDRKTWGGTRRR		 Dap-seq
OMalley et al.(2016)
MYB40_col_a 		0.711 0.837
MYB43
M07127_2.00 		Arabidopsis thaliana
NYYYACCWAMYWH
DWRKTWGGTRRRN		 Dap-seq
OMalley et al.(2016)
MYB43_col_a 		0.680 0.750
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
cassava15064.m1 Myb 14 61
cassava15064.m1 Myb 67 111

Links

Other Myb/SANT family TFs
Other Manihot esculenta TFs

178 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29929.m004749 Ricinus communis 29929.m004749 I 0.847
Gorai.006G037500 Gossypium raimondii Gorai.006G037500 I 0.831
TCM_017051 Theobroma cacao TCM_017051 I 0.831
mgf018940m Mimulus guttatus mgf018940m I 0.830
AtMYB40 Vitis vinifera VIT_14s0219g00050 I 0.830
SapurV1A.0136s0070 Salix purpurea SapurV1A.0136s0070 I 0.827
Ca_19393 Cicer arietinum Ca_19393 I 0.826
Lus10032117.g Linum usitatissimum Lus10032117.g I 0.824
Solyc02g093740.2 Solanum lycopersicum Solyc02g093740.2 I 0.821
PGSC0003DMG400012648 Solanum tuberosum PGSC0003DMG400012648 I 0.821
Eucgr.J02279 Eucalyptus grandis Eucgr.J02279 I 0.819
evm.TU.supercontig_1097.3 Carica papaya evm.TU.supercontig_1097.3 I 0.814
AtMYB40 Populus trichocarpa POPTR_0008s18110 I 0.813
Eucgr.I01698 Eucalyptus grandis Eucgr.I01698 I 0.813
cassava17364.m1 Manihot esculenta cassava17364.m1 I 0.807
SapurV1A.0206s0260 Salix purpurea SapurV1A.0206s0260 I 0.804
Aquca_011_00323 Aquilegia coerulea Aquca_011_00323 I 0.802
Ciclev10017764m.g Citrus clementina Ciclev10017764m.g I 0.802
cassava3745.m1 Manihot esculenta cassava3745.m1 I 0.800
GLYMA19G07830 Glycine max GLYMA19G07830 I 0.799
POPTR_0001s36220 Populus trichocarpa POPTR_0001s36220 I 0.794
GLYMA05G06410 Glycine max GLYMA05G06410 I 0.793
PRUPE_ppa026877mg Prunus persica PRUPE_ppa026877mg I 0.792
gene28021-v1.0-hybrid Fragaria vesca gene28021-v1.0-hybrid I 0.792
GLYMA16G06900 Glycine max GLYMA16G06900 I 0.786
Lus10014569.g Linum usitatissimum Lus10014569.g I 0.779
Solyc05g014290.2 Solanum lycopersicum Solyc05g014290.2 I 0.779
Cucsa.156340 Cucumis sativus Cucsa.156340 I 0.779
Cla004104 Citrullus lanatus Cla004104 I 0.779
Pm015564 Prunus mume Pm015564 I 0.777
Gorai.007G074500 Gossypium raimondii Gorai.007G074500 I 0.776
MDP0000303239 Malus domestica MDP0000303239 I 0.773
MDP0000241111 Malus domestica MDP0000241111 I 0.773
Aquca_011_00322 Aquilegia coerulea Aquca_011_00322 I 0.770
GSMUA_Achr6G06800_001 Musa acuminata GSMUA_Achr6G06800_001 I 0.764
Gorai.001G268000 Gossypium raimondii Gorai.001G268000 I 0.761
PGSC0003DMG400011976 Solanum tuberosum PGSC0003DMG400011976 I 0.754
mgf025004m Mimulus guttatus mgf025004m I 0.746
Bra008764 Brassica rapa Bra008764 I 0.730
GSMUA_AchrUn_randomG11880_001 Musa acuminata GSMUA_AchrUn_randomG11880_001 N 0.728
AMTR_s00049p00074250 Amborella trichopoda AMTR_s00049p00074250 I 0.722
Bo3g009730 Brassica oleracea Bo3g009730 I 0.721
Bra006249 Brassica rapa Bra006249 I 0.721
Bo9g166000 Brassica oleracea Bo9g166000 I 0.721
SapurV1A.0456s0310 Salix purpurea SapurV1A.0456s0310 I 0.717
SapurV1A.0367s0020 Salix purpurea SapurV1A.0367s0020 I 0.717
Thhalv10014425m.g Eutrema salsugineum Thhalv10014425m.g I 0.711
Cagra.3166s0041 Capsella grandiflora Cagra.3166s0041 I 0.711
AtMYB40 Arabidopsis thaliana AT5G14340 D 0.711
Bostr.2902s0170 Boechera stricta Bostr.2902s0170 I 0.711
POPTR_0015s14600 Populus trichocarpa POPTR_0015s14600 I 0.700
GLYMA01G42050 Glycine max GLYMA01G42050 I 0.700
SapurV1A.1318s0060 Salix purpurea SapurV1A.1318s0060 I 0.698
SapurV1A.0102s0470 Salix purpurea SapurV1A.0102s0470 I 0.698
Gorai.008G238800 Gossypium raimondii Gorai.008G238800 I 0.697
BRADI4G29796 Brachypodium distachyon BRADI4G29796 I 0.696
Sb04g028850 Sorghum bicolor Sb04g028850 I 0.691
Si020225m.g Setaria italica Si020225m.g I 0.691
ORGLA02G0269000 Oryza glaberrima ORGLA02G0269000 I 0.691
OGLUM02G32070 Oryza glumaepatula OGLUM02G32070 I 0.691
OB02G38450 Oryza brachyantha OB02G38450 I 0.691
Pavir.Aa00435 Panicum virgatum Pavir.Aa00435 I 0.691
BGIOSGA005676 Oryza indica BGIOSGA005676 I 0.691
ORUFI02G33090 Oryza rufipogon ORUFI02G33090 I 0.691
GRMZM2G055158 Zea mays GRMZM2G055158 I 0.691
OS02G0732600 Oryza sativa OS02G0732600 I 0.691
Aquca_013_00661 Aquilegia coerulea Aquca_013_00661 I 0.689
Bo4g101470 Brassica oleracea Bo4g101470 I 0.688
Pavir.Bb02654 Panicum virgatum Pavir.Bb02654 I 0.687
Pavir.Ba01239 Panicum virgatum Pavir.Ba01239 I 0.687
cassava2058.valid.m1 Manihot esculenta cassava2058.valid.m1 I 0.687
30190.m011004 Ricinus communis 30190.m011004 I 0.687
SapurV1A.0045s0090 Salix purpurea SapurV1A.0045s0090 I 0.687
SapurV1A.0634s0020 Salix purpurea SapurV1A.0634s0020 I 0.687
cassava33331.m1 Manihot esculenta cassava33331.m1 I 0.687
Pm023573 Prunus mume Pm023573 I 0.687
Eucgr.D02014 Eucalyptus grandis Eucgr.D02014 I 0.687
cassava47045.m1 Manihot esculenta cassava47045.m1 I 0.687
Lus10027197.g Linum usitatissimum Lus10027197.g I 0.687
Gorai.004G201900 Gossypium raimondii Gorai.004G201900 I 0.687
evm.TU.supercontig_3.300 Carica papaya evm.TU.supercontig_3.300 I 0.687
Gorai.003G168100 Gossypium raimondii Gorai.003G168100 I 0.687
Lus10038913.g Linum usitatissimum Lus10038913.g I 0.687
Ciclev10021695m.g Citrus clementina Ciclev10021695m.g I 0.687
gene32268-v1.0-hybrid Fragaria vesca gene32268-v1.0-hybrid I 0.687
orange1.1g024849m.g Citrus sinensis orange1.1g024849m.g I 0.687
orange1.1g024441m.g Citrus sinensis orange1.1g024441m.g I 0.687
Ciclev10005666m.g Citrus clementina Ciclev10005666m.g I 0.687
Cla011736 Citrullus lanatus Cla011736 I 0.687
TCM_014956 Theobroma cacao TCM_014956 I 0.687
Solyc08g079270.2 Solanum lycopersicum Solyc08g079270.2 I 0.687
GLYMA17G14291 Glycine max GLYMA17G14291 I 0.687
POPTR_0003s11360 Populus trichocarpa POPTR_0003s11360 I 0.687
GLYMA05G03780 Glycine max GLYMA05G03780 I 0.687
Si030750m.g Setaria italica Si030750m.g I 0.687
VIT_00s1241g00010 Vitis vinifera VIT_00s1241g00010 I 0.687
POPTR_0001s07830 Populus trichocarpa POPTR_0001s07830 I 0.687
Cla003626 Citrullus lanatus Cla003626 I 0.687
PGSC0003DMG400004780 Solanum tuberosum PGSC0003DMG400004780 I 0.687
PRUPE_ppa021568mg Prunus persica PRUPE_ppa021568mg I 0.687
TCM_016054 Theobroma cacao TCM_016054 I 0.687
VIT_16s0022g01210 Vitis vinifera VIT_16s0022g01210 I 0.687
MTR_4g102380 Medicago truncatula MTR_4g102380 I 0.683
MDP0000682032 Malus domestica MDP0000682032 I 0.683
Ca_08722 Cicer arietinum Ca_08722 I 0.683
PK08857.1 Cannabis sativa PK08857.1 I 0.683
chr4.CM0126.370.nd Lotus japonicus chr4.CM0126.370.nd I 0.683
Pavir.Ab02913 Panicum virgatum Pavir.Ab02913 I 0.681
GSMUA_Achr7G12520_001 Musa acuminata GSMUA_Achr7G12520_001 I 0.681
MYB43 Arabidopsis lyrata scaffold_601700.1 I 0.680
Cagra.0434s0026 Capsella grandiflora Cagra.0434s0026 I 0.680
Carubv10001378m.g Capsella rubella Carubv10001378m.g I 0.680
Bostr.2902s0397 Boechera stricta Bostr.2902s0397 I 0.680
MYB43 Arabidopsis thaliana AT5G16600 D 0.680
PDK_20s1306131g002 Phoenix dactylifera PDK_20s1306131g002 I 0.679
Traes_5BL_D85C0EF26 Triticum aestivum Traes_5BL_D85C0EF26 I 0.679
Traes_5DL_46D39C394 Triticum aestivum Traes_5DL_46D39C394 I 0.679
F775_13107 Aegilops tauschii F775_13107 I 0.679
Pm019472 Prunus mume Pm019472 I 0.677
Gorai.004G064100 Gossypium raimondii Gorai.004G064100 I 0.677
PRUPE_ppa011549mg Prunus persica PRUPE_ppa011549mg I 0.677
GSMUA_Achr4G19880_001 Musa acuminata GSMUA_Achr4G19880_001 I 0.676
OB08G22860 Oryza brachyantha OB08G22860 I 0.676
Gorai.006G064000 Gossypium raimondii Gorai.006G064000 I 0.675
MLOC_50944 Hordeum vulgare MLOC_50944 I 0.674
F775_17058 Aegilops tauschii F775_17058 I 0.674
Pavir.Da01229 Panicum virgatum Pavir.Da01229 I 0.674
TRIUR3_16495 Triticum urartu TRIUR3_16495 I 0.674
BRADI3G56917 Brachypodium distachyon BRADI3G56917 I 0.674
cassava21367.m1 Manihot esculenta cassava21367.m1 I 0.673
GSMUA_Achr7G05680_001 Musa acuminata GSMUA_Achr7G05680_001 I 0.672
Lus10024589.g Linum usitatissimum Lus10024589.g I 0.670
Lus10032226.g Linum usitatissimum Lus10032226.g I 0.670
MYB42 Arabidopsis lyrata fgenesh1_pm.C_scaffold_6002571 I 0.670
GLYMA11G03300 Glycine max GLYMA11G03300 I 0.670
mgf017719m Mimulus guttatus mgf017719m I 0.670
Cucsa.302180 Cucumis sativus Cucsa.302180 I 0.670
GLYMA11G33620 Glycine max GLYMA11G33620 I 0.668
Cucsa.006170 Cucumis sativus Cucsa.006170 I 0.668
GLYMA14G39530 Glycine max GLYMA14G39530 I 0.668
orange1.1g021498m.g Citrus sinensis orange1.1g021498m.g I 0.668
Eucgr.F02864 Eucalyptus grandis Eucgr.F02864 I 0.668
cassava6251.valid.m1 Manihot esculenta cassava6251.valid.m1 I 0.668
Solyc04g014470.2 Solanum lycopersicum Solyc04g014470.2 I 0.668
GLYMA02G41180 Glycine max GLYMA02G41180 I 0.668
TCM_019116 Theobroma cacao TCM_019116 I 0.668
POPTR_0017s02850 Populus trichocarpa POPTR_0017s02850 I 0.668
SapurV1A.0390s0060 Salix purpurea SapurV1A.0390s0060 I 0.668
PGSC0003DMG400015668 Solanum tuberosum PGSC0003DMG400015668 I 0.668
PRUPE_ppa009966mg Prunus persica PRUPE_ppa009966mg I 0.668
Ca_13286 Cicer arietinum Ca_13286 I 0.668
Solyc11g011050.1 Solanum lycopersicum Solyc11g011050.1 I 0.668
MTR_5g078140 Medicago truncatula MTR_5g078140 I 0.668
Gorai.008G060100 Gossypium raimondii Gorai.008G060100 I 0.668
MTR_3g065440 Medicago truncatula MTR_3g065440 I 0.668
Ciclev10012265m.g Citrus clementina Ciclev10012265m.g I 0.668
Pm013020 Prunus mume Pm013020 I 0.668
Eucgr.J01601 Eucalyptus grandis Eucgr.J01601 I 0.668
Gorai.001G205300 Gossypium raimondii Gorai.001G205300 I 0.668
POPTR_0004s08480 Populus trichocarpa POPTR_0004s08480 I 0.668
GLYMA18G04580 Glycine max GLYMA18G04580 I 0.668
Bo2g013190 Brassica oleracea Bo2g013190 I 0.667
BGIOSGA030727 Oryza indica BGIOSGA030727 I 0.666
Pavir.Ba02148 Panicum virgatum Pavir.Ba02148 I 0.666
Pavir.Ba02149 Panicum virgatum Pavir.Ba02149 I 0.666
Pavir.J21364 Panicum virgatum Pavir.J21364 I 0.666
ORUFI09G10320 Oryza rufipogon ORUFI09G10320 I 0.666
GRMZM2G169356 Zea mays GRMZM2G169356 I 0.666
Pavir.Bb01872 Panicum virgatum Pavir.Bb01872 I 0.666
OS09G0401000 Oryza sativa OS09G0401000 I 0.666
Pavir.Bb01873 Panicum virgatum Pavir.Bb01873 I 0.666
ORGLA09G0071400 Oryza glaberrima ORGLA09G0071400 I 0.666
Lus10004042.g Linum usitatissimum Lus10004042.g I 0.665
cassava30009.valid.m1 Manihot esculenta cassava30009.valid.m1 I 0.665
Bo9g163020 Brassica oleracea Bo9g163020 I 0.663
Thhalv10014086m.g Eutrema salsugineum Thhalv10014086m.g I 0.663
BRADI3G36370 Brachypodium distachyon BRADI3G36370 I 0.663
fgenesh1_pg.scaffold_420000003 Physcomitrella patens fgenesh1_pg.scaffold_420000003 I 0.662