Solyc05g014290.2 (Solanum lycopersicum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 Solyc05g014290.2 T280127_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AtMYB40
M07126_2.00 		Arabidopsis thaliana
YYYACCWAMYHHH
DDDRKTWGGTRRR		 Dap-seq
OMalley et al.(2016)
MYB40_col_a 		0.774 0.849
MYB43
M07127_2.00 		Arabidopsis thaliana
NYYYACCWAMYWH
DWRKTWGGTRRRN		 Dap-seq
OMalley et al.(2016)
MYB43_col_a 		0.728 0.774
PK21166.1
M01281_2.00 		Cannabis sativa
HACCWAMY
RKTWGGTD		 PBM
Lambert et al.(2019)
pTH11255 		0.712 0.774
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Solyc05g014290.2.1 Myb 14 61
Solyc05g014290.2.1 Myb 67 112

Links

Other Myb/SANT family TFs
Other Solanum lycopersicum TFs

221 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PGSC0003DMG400011976 Solanum tuberosum PGSC0003DMG400011976 I 0.884
Gorai.001G268000 Gossypium raimondii Gorai.001G268000 I 0.852
TCM_017051 Theobroma cacao TCM_017051 I 0.837
Gorai.006G037500 Gossypium raimondii Gorai.006G037500 I 0.837
mgf018940m Mimulus guttatus mgf018940m I 0.836
AtMYB40 Vitis vinifera VIT_14s0219g00050 I 0.836
Solyc02g093740.2 Solanum lycopersicum Solyc02g093740.2 I 0.833
PGSC0003DMG400012648 Solanum tuberosum PGSC0003DMG400012648 I 0.833
Ciclev10017764m.g Citrus clementina Ciclev10017764m.g I 0.830
PRUPE_ppa026877mg Prunus persica PRUPE_ppa026877mg I 0.828
gene28021-v1.0-hybrid Fragaria vesca gene28021-v1.0-hybrid I 0.828
29929.m004749 Ricinus communis 29929.m004749 I 0.826
Eucgr.J02279 Eucalyptus grandis Eucgr.J02279 I 0.825
GLYMA16G06900 Glycine max GLYMA16G06900 I 0.822
evm.TU.supercontig_1097.3 Carica papaya evm.TU.supercontig_1097.3 I 0.820
Eucgr.I01698 Eucalyptus grandis Eucgr.I01698 I 0.819
cassava17364.m1 Manihot esculenta cassava17364.m1 I 0.813
Pm015564 Prunus mume Pm015564 I 0.813
Cla004104 Citrullus lanatus Cla004104 I 0.811
Cucsa.156340 Cucumis sativus Cucsa.156340 I 0.811
Lus10032117.g Linum usitatissimum Lus10032117.g I 0.809
MDP0000303239 Malus domestica MDP0000303239 I 0.809
MDP0000241111 Malus domestica MDP0000241111 I 0.809
GLYMA19G07830 Glycine max GLYMA19G07830 I 0.808
cassava3745.m1 Manihot esculenta cassava3745.m1 I 0.806
Ca_19393 Cicer arietinum Ca_19393 I 0.805
Aquca_011_00323 Aquilegia coerulea Aquca_011_00323 I 0.804
POPTR_0001s36220 Populus trichocarpa POPTR_0001s36220 I 0.800
mgf025004m Mimulus guttatus mgf025004m I 0.799
Bra008764 Brassica rapa Bra008764 I 0.793
GLYMA05G06410 Glycine max GLYMA05G06410 I 0.793
Lus10014569.g Linum usitatissimum Lus10014569.g I 0.785
Bra006249 Brassica rapa Bra006249 I 0.784
Bo3g009730 Brassica oleracea Bo3g009730 I 0.784
Bo9g166000 Brassica oleracea Bo9g166000 I 0.784
Gorai.007G074500 Gossypium raimondii Gorai.007G074500 I 0.782
cassava15064.m1 Manihot esculenta cassava15064.m1 I 0.779
Bostr.2902s0170 Boechera stricta Bostr.2902s0170 I 0.774
Cagra.3166s0041 Capsella grandiflora Cagra.3166s0041 I 0.774
Thhalv10014425m.g Eutrema salsugineum Thhalv10014425m.g I 0.774
AtMYB40 Arabidopsis thaliana AT5G14340 D 0.774
SapurV1A.0136s0070 Salix purpurea SapurV1A.0136s0070 I 0.773
Aquca_011_00322 Aquilegia coerulea Aquca_011_00322 I 0.767
PGSC0003DMG400015668 Solanum tuberosum PGSC0003DMG400015668 I 0.759
Solyc11g011050.1 Solanum lycopersicum Solyc11g011050.1 I 0.759
Solyc04g014470.2 Solanum lycopersicum Solyc04g014470.2 I 0.759
Bostr.2902s0397 Boechera stricta Bostr.2902s0397 I 0.753
Carubv10001378m.g Capsella rubella Carubv10001378m.g I 0.753
MYB43 Arabidopsis lyrata scaffold_601700.1 I 0.753
Cagra.0434s0026 Capsella grandiflora Cagra.0434s0026 I 0.753
GSMUA_Achr6G06800_001 Musa acuminata GSMUA_Achr6G06800_001 I 0.752
GSMUA_AchrUn_randomG11880_001 Musa acuminata GSMUA_AchrUn_randomG11880_001 N 0.745
Bo4g101470 Brassica oleracea Bo4g101470 I 0.741
Bo2g013190 Brassica oleracea Bo2g013190 I 0.739
AtMYB40 Populus trichocarpa POPTR_0008s18110 I 0.738
Bo9g163020 Brassica oleracea Bo9g163020 I 0.735
Thhalv10014086m.g Eutrema salsugineum Thhalv10014086m.g I 0.735
SapurV1A.0206s0260 Salix purpurea SapurV1A.0206s0260 I 0.735
AMTR_s00049p00074250 Amborella trichopoda AMTR_s00049p00074250 I 0.732
Eucgr.F02864 Eucalyptus grandis Eucgr.F02864 I 0.729
Gorai.001G205300 Gossypium raimondii Gorai.001G205300 I 0.729
SapurV1A.0390s0060 Salix purpurea SapurV1A.0390s0060 I 0.729
TCM_019116 Theobroma cacao TCM_019116 I 0.729
Gorai.004G064100 Gossypium raimondii Gorai.004G064100 I 0.729
Ciclev10012265m.g Citrus clementina Ciclev10012265m.g I 0.729
POPTR_0017s02850 Populus trichocarpa POPTR_0017s02850 I 0.729
Gorai.008G060100 Gossypium raimondii Gorai.008G060100 I 0.729
Ca_13286 Cicer arietinum Ca_13286 I 0.729
POPTR_0004s08480 Populus trichocarpa POPTR_0004s08480 I 0.729
PRUPE_ppa009966mg Prunus persica PRUPE_ppa009966mg I 0.729
SapurV1A.1318s0060 Salix purpurea SapurV1A.1318s0060 I 0.729
Pm013020 Prunus mume Pm013020 I 0.729
MTR_5g078140 Medicago truncatula MTR_5g078140 I 0.729
GLYMA14G39530 Glycine max GLYMA14G39530 I 0.729
GLYMA18G04580 Glycine max GLYMA18G04580 I 0.729
orange1.1g021498m.g Citrus sinensis orange1.1g021498m.g I 0.729
GLYMA11G33620 Glycine max GLYMA11G33620 I 0.729
MTR_3g065440 Medicago truncatula MTR_3g065440 I 0.729
SapurV1A.0102s0470 Salix purpurea SapurV1A.0102s0470 I 0.729
GLYMA02G41180 Glycine max GLYMA02G41180 I 0.729
cassava6251.valid.m1 Manihot esculenta cassava6251.valid.m1 I 0.729
Cucsa.006170 Cucumis sativus Cucsa.006170 I 0.729
MYB43 Arabidopsis thaliana AT5G16600 D 0.728
cassava30009.valid.m1 Manihot esculenta cassava30009.valid.m1 I 0.726
Cla009311 Citrullus lanatus Cla009311 I 0.720
Pavir.J21364 Panicum virgatum Pavir.J21364 I 0.718
Bo6g099800 Brassica oleracea Bo6g099800 I 0.715
Cagra.1300s0004 Capsella grandiflora Cagra.1300s0004 I 0.715
Bostr.26959s0295 Boechera stricta Bostr.26959s0295 I 0.715
Bra004155 Brassica rapa Bra004155 I 0.715
Carubv10020766m.g Capsella rubella Carubv10020766m.g I 0.715
MYB43 Vitis vinifera VIT_14s0006g00450 I 0.712
gene30520-v1.0-hybrid Fragaria vesca gene30520-v1.0-hybrid I 0.712
GSMUA_Achr5G23110_001 Musa acuminata GSMUA_Achr5G23110_001 I 0.712
PK21166.1 Cannabis sativa PK21166.1 D 0.712
Thhalv10019852m.g Eutrema salsugineum Thhalv10019852m.g I 0.712
Cucsa.375180 Cucumis sativus Cucsa.375180 I 0.712
MYB20 Arabidopsis lyrata scaffold_201335.1 I 0.712
Lus10004042.g Linum usitatissimum Lus10004042.g I 0.709
MYB20 Arabidopsis thaliana AT1G66230 I 0.707
Eucgr.J01601 Eucalyptus grandis Eucgr.J01601 I 0.704
GSMUA_Achr9G15640_001 Musa acuminata GSMUA_Achr9G15640_001 I 0.701
Cagra.14303s0002 Capsella grandiflora Cagra.14303s0002 I 0.695
Carubv10003172m.g Capsella rubella Carubv10003172m.g I 0.695
ORGLA09G0071400 Oryza glaberrima ORGLA09G0071400 I 0.694
ORUFI09G10320 Oryza rufipogon ORUFI09G10320 I 0.694
GRMZM2G169356 Zea mays GRMZM2G169356 I 0.694
Pavir.Bb01873 Panicum virgatum Pavir.Bb01873 I 0.694
OS09G0401000 Oryza sativa OS09G0401000 I 0.694
BGIOSGA030727 Oryza indica BGIOSGA030727 I 0.694
Lus10004043.g Linum usitatissimum Lus10004043.g I 0.691
Lus10002296.g Linum usitatissimum Lus10002296.g I 0.691
BRADI3G36370 Brachypodium distachyon BRADI3G36370 I 0.690
Pavir.Fb01563 Panicum virgatum Pavir.Fb01563 I 0.687
GRMZM2G106558 Zea mays GRMZM2G106558 I 0.687
OB09G16260 Oryza brachyantha OB09G16260 I 0.685
Pavir.Aa00435 Panicum virgatum Pavir.Aa00435 I 0.685
OB02G38450 Oryza brachyantha OB02G38450 I 0.685
ORGLA02G0269000 Oryza glaberrima ORGLA02G0269000 I 0.685
GRMZM2G055158 Zea mays GRMZM2G055158 I 0.685
BGIOSGA005676 Oryza indica BGIOSGA005676 I 0.685
OGLUM02G32070 Oryza glumaepatula OGLUM02G32070 I 0.685
OS02G0732600 Oryza sativa OS02G0732600 I 0.685
Si020225m.g Setaria italica Si020225m.g I 0.685
ORUFI02G33090 Oryza rufipogon ORUFI02G33090 I 0.685
Sb04g028850 Sorghum bicolor Sb04g028850 I 0.685
Pavir.Fa00850 Panicum virgatum Pavir.Fa00850 I 0.684
GSMUA_Achr7G12520_001 Musa acuminata GSMUA_Achr7G12520_001 I 0.682
Sb02g024250 Sorghum bicolor Sb02g024250 I 0.678
Bostr.25463s0081 Boechera stricta Bostr.25463s0081 I 0.678
Si014144m.g Setaria italica Si014144m.g I 0.678
GRMZM2G126566 Zea mays GRMZM2G126566 I 0.677
Si031939m.g Setaria italica Si031939m.g I 0.677
Traes_5BL_D85C0EF26 Triticum aestivum Traes_5BL_D85C0EF26 I 0.677
F775_13107 Aegilops tauschii F775_13107 I 0.677
OPUNC08G12780 Oryza punctata OPUNC08G12780 I 0.677
Pavir.Ba02150 Panicum virgatum Pavir.Ba02150 I 0.677
fgenesh1_pg.scaffold_420000003 Physcomitrella patens fgenesh1_pg.scaffold_420000003 I 0.677
Traes_5DL_46D39C394 Triticum aestivum Traes_5DL_46D39C394 I 0.677
AMTR_s00091p00025820 Amborella trichopoda AMTR_s00091p00025820 I 0.676
Pavir.Ab02913 Panicum virgatum Pavir.Ab02913 I 0.674
GSMUA_Achr10G29970_001 Musa acuminata GSMUA_Achr10G29970_001 I 0.674
GSMUA_Achr5G05910_001 Musa acuminata GSMUA_Achr5G05910_001 I 0.674
ORGLA08G0134400 Oryza glaberrima ORGLA08G0134400 I 0.673
OB08G22860 Oryza brachyantha OB08G22860 I 0.673
BGIOSGA028709 Oryza indica BGIOSGA028709 I 0.673
MDP0000682032 Malus domestica MDP0000682032 I 0.669
Aquca_013_00661 Aquilegia coerulea Aquca_013_00661 I 0.669
TRIUR3_16495 Triticum urartu TRIUR3_16495 I 0.668
ORGLA06G0093500 Oryza glaberrima ORGLA06G0093500 I 0.668
Si030711m.g Setaria italica Si030711m.g I 0.668
Si007017m.g Setaria italica Si007017m.g I 0.668
GRMZM2G048910 Zea mays GRMZM2G048910 I 0.668
MLOC_14021 Hordeum vulgare MLOC_14021 I 0.668
MLOC_50944 Hordeum vulgare MLOC_50944 I 0.668
Si032544m.g Setaria italica Si032544m.g I 0.668
Traes_7DS_5100A9609 Triticum aestivum Traes_7DS_5100A9609 I 0.668
F775_29159 Aegilops tauschii F775_29159 I 0.668
F775_17058 Aegilops tauschii F775_17058 I 0.668
OS06G0258000 Oryza sativa OS06G0258000 I 0.668
BGIOSGA022649 Oryza indica BGIOSGA022649 I 0.668
BRADI3G56917 Brachypodium distachyon BRADI3G56917 I 0.668
Sb02g024260 Sorghum bicolor Sb02g024260 I 0.668
ORUFI06G10280 Oryza rufipogon ORUFI06G10280 I 0.668
Sb10g009330 Sorghum bicolor Sb10g009330 I 0.668
OB06G19130 Oryza brachyantha OB06G19130 I 0.668
estExt_gwp_gw1.C_780109 Physcomitrella patens estExt_gwp_gw1.C_780109 N 0.667
Pavir.Db01743 Panicum virgatum Pavir.Db01743 I 0.666
Lus10038913.g Linum usitatissimum Lus10038913.g I 0.665
SapurV1A.0456s0310 Salix purpurea SapurV1A.0456s0310 I 0.665
SapurV1A.0634s0020 Salix purpurea SapurV1A.0634s0020 I 0.665
PK08857.1 Cannabis sativa PK08857.1 I 0.665
chr4.CM0126.370.nd Lotus japonicus chr4.CM0126.370.nd I 0.665
Lus10027197.g Linum usitatissimum Lus10027197.g I 0.665
SapurV1A.0367s0020 Salix purpurea SapurV1A.0367s0020 I 0.665
GLYMA05G03780 Glycine max GLYMA05G03780 I 0.665
orange1.1g024441m.g Citrus sinensis orange1.1g024441m.g I 0.665
orange1.1g024849m.g Citrus sinensis orange1.1g024849m.g I 0.665
POPTR_0001s07830 Populus trichocarpa POPTR_0001s07830 I 0.665
GLYMA17G14291 Glycine max GLYMA17G14291 I 0.665
SapurV1A.0045s0090 Salix purpurea SapurV1A.0045s0090 I 0.665
MTR_4g102380 Medicago truncatula MTR_4g102380 I 0.665
PGSC0003DMG400004780 Solanum tuberosum PGSC0003DMG400004780 I 0.665
Ciclev10021695m.g Citrus clementina Ciclev10021695m.g I 0.665
Ca_08722 Cicer arietinum Ca_08722 I 0.665
Cla003626 Citrullus lanatus Cla003626 I 0.665
Eucgr.D02014 Eucalyptus grandis Eucgr.D02014 I 0.665
VIT_16s0022g01210 Vitis vinifera VIT_16s0022g01210 I 0.665
TCM_016054 Theobroma cacao TCM_016054 I 0.665
VIT_00s1241g00010 Vitis vinifera VIT_00s1241g00010 I 0.665
Ciclev10005666m.g Citrus clementina Ciclev10005666m.g I 0.665
Cla011736 Citrullus lanatus Cla011736 I 0.665
cassava47045.m1 Manihot esculenta cassava47045.m1 I 0.665
Cucsa.115620 Cucumis sativus Cucsa.115620 I 0.665
cassava33331.m1 Manihot esculenta cassava33331.m1 I 0.665
cassava2058.valid.m1 Manihot esculenta cassava2058.valid.m1 I 0.665
Pm023573 Prunus mume Pm023573 I 0.665
30190.m011004 Ricinus communis 30190.m011004 I 0.665
POPTR_0003s11360 Populus trichocarpa POPTR_0003s11360 I 0.665
Eucgr.K00153 Eucalyptus grandis Eucgr.K00153 I 0.665
gene32268-v1.0-hybrid Fragaria vesca gene32268-v1.0-hybrid I 0.665
POPTR_0012s14540 Populus trichocarpa POPTR_0012s14540 I 0.665
Gorai.003G168100 Gossypium raimondii Gorai.003G168100 I 0.665
Gorai.004G201900 Gossypium raimondii Gorai.004G201900 I 0.665
PRUPE_ppa021568mg Prunus persica PRUPE_ppa021568mg I 0.665
gene21264-v1.0-hybrid Fragaria vesca gene21264-v1.0-hybrid I 0.665
Solyc08g079270.2 Solanum lycopersicum Solyc08g079270.2 I 0.665
Gorai.008G238800 Gossypium raimondii Gorai.008G238800 I 0.665
evm.TU.supercontig_3.300 Carica papaya evm.TU.supercontig_3.300 I 0.665
TCM_014956 Theobroma cacao TCM_014956 I 0.665
Pavir.Ba02149 Panicum virgatum Pavir.Ba02149 I 0.664
Pavir.Ba02148 Panicum virgatum Pavir.Ba02148 I 0.664
Pavir.Bb01872 Panicum virgatum Pavir.Bb01872 I 0.664
BRADI4G29796 Brachypodium distachyon BRADI4G29796 I 0.664
Bo3g107740 Brassica oleracea Bo3g107740 I 0.663
OS09G0532900 Oryza sativa OS09G0532900 I 0.662
BGIOSGA029380 Oryza indica BGIOSGA029380 I 0.662
ORGLA09G0137500 Oryza glaberrima ORGLA09G0137500 I 0.662
OB09G24070 Oryza brachyantha OB09G24070 I 0.662
OLONG_005336 Oryza longistaminata OLONG_005336 I 0.662
Bo3g165540 Brassica oleracea Bo3g165540 I 0.661