Bra031704 (Brassica rapa)
NFX

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF01422 (zf-NF-X1) IPR000967 Bra031704 T300389_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Bra031704.1-P NFX 195 212
Bra031704.1-P NFX 240 268
Bra031704.1-P NFX 314 332
Bra031704.1-P NFX 373 391
Bra031704.1-P NFX 431 442
Bra031704.1-P NFX 452 475
Bra031704.1-P NFX 515 532
Bra031704.1-P NFX 568 586
Bra031704.1-P NFX 592 623

Links

Other NFX family TFs
Other Brassica rapa TFs

36 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bra019958 Brassica rapa Bra019958 N 0.870
Bo5g010600 Brassica oleracea Bo5g010600 N 0.870
ATNFXL1 Arabidopsis thaliana AT1G10170 N 0.863
ATNFXL1 Arabidopsis lyrata fgenesh2_kg.1__1086__AT1G10170.1 N 0.851
Cagra.1508s0074 Capsella grandiflora Cagra.1508s0074 N 0.820
Carubv10008145m.g Capsella rubella Carubv10008145m.g N 0.820
cassava4965.m1 Manihot esculenta cassava4965.m1 N 0.814
fgenesh1_pg.C_scaffold_1003098 Arabidopsis lyrata fgenesh1_pg.C_scaffold_1003098 N 0.807
POPTR_0012s04070 Populus trichocarpa POPTR_0012s04070 N 0.801
Cucsa.122080 Cucumis sativus Cucsa.122080 N 0.795
orange1.1g001378m.g Citrus sinensis orange1.1g001378m.g N 0.795
Ciclev10018607m.g Citrus clementina Ciclev10018607m.g N 0.790
Lus10034470.g Linum usitatissimum Lus10034470.g N 0.783
Lus10025071.g Linum usitatissimum Lus10025071.g N 0.776
Gorai.006G058600 Gossypium raimondii Gorai.006G058600 N 0.770
Cla018720 Citrullus lanatus Cla018720 N 0.770
Bra018458 Brassica rapa Bra018458 N 0.770
Bo8g059130 Brassica oleracea Bo8g059130 N 0.770
GLYMA09G30343 Glycine max GLYMA09G30343 N 0.764
Eucgr.H00552 Eucalyptus grandis Eucgr.H00552 N 0.764
TCM_012484 Theobroma cacao TCM_012484 N 0.764
GLYMA08G06040 Glycine max GLYMA08G06040 N 0.764
TCM_017029 Theobroma cacao TCM_017029 N 0.758
GLYMA07G11834 Glycine max GLYMA07G11834 N 0.758
Eucgr.K02284 Eucalyptus grandis Eucgr.K02284 N 0.758
Aquca_032_00102 Aquilegia coerulea Aquca_032_00102 N 0.752
Aquca_044_00077 Aquilegia coerulea Aquca_044_00077 N 0.745
PK00983.1 Cannabis sativa PK00983.1 N 0.739
GRMZM2G087787 Zea mays GRMZM2G087787 N 0.727
Sb10g009070 Sorghum bicolor Sb10g009070 N 0.721
MDP0000280911 Malus domestica MDP0000280911 N 0.721
Sb04g038100 Sorghum bicolor Sb04g038100 N 0.714
PRUPE_ppa000543mg Prunus persica PRUPE_ppa000543mg N 0.714
Pm025049 Prunus mume Pm025049 N 0.708
27791.m000083 Ricinus communis 27791.m000083 N 0.708
SapurV1A.0082s0290 Salix purpurea SapurV1A.0082s0290 N 0.702