Bra019958 (Brassica rapa)
NFX

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF01422 (zf-NF-X1) IPR000967 Bra019958 T300388_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Bra019958.1-P NFX 305 322
Bra019958.1-P NFX 360 378
Bra019958.1-P NFX 424 442
Bra019958.1-P NFX 483 501
Bra019958.1-P NFX 542 553
Bra019958.1-P NFX 581 599
Bra019958.1-P NFX 638 655
Bra019958.1-P NFX 691 708
Bra019958.1-P NFX 718 750

Links

Other NFX family TFs
Other Brassica rapa TFs

40 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bo5g010600 Brassica oleracea Bo5g010600 N 1.000
ATNFXL1 Arabidopsis thaliana AT1G10170 N 0.944
ATNFXL1 Arabidopsis lyrata fgenesh2_kg.1__1086__AT1G10170.1 N 0.938
Carubv10008145m.g Capsella rubella Carubv10008145m.g N 0.875
Cagra.1508s0074 Capsella grandiflora Cagra.1508s0074 N 0.875
Bra031704 Brassica rapa Bra031704 N 0.870
cassava4965.m1 Manihot esculenta cassava4965.m1 N 0.869
fgenesh1_pg.C_scaffold_1003098 Arabidopsis lyrata fgenesh1_pg.C_scaffold_1003098 N 0.850
Bra018458 Brassica rapa Bra018458 N 0.844
Ciclev10018607m.g Citrus clementina Ciclev10018607m.g N 0.840
orange1.1g001378m.g Citrus sinensis orange1.1g001378m.g N 0.840
POPTR_0012s04070 Populus trichocarpa POPTR_0012s04070 N 0.838
Lus10034470.g Linum usitatissimum Lus10034470.g N 0.838
Bo8g059130 Brassica oleracea Bo8g059130 N 0.838
Lus10025071.g Linum usitatissimum Lus10025071.g N 0.831
Cucsa.122080 Cucumis sativus Cucsa.122080 N 0.831
Gorai.006G058600 Gossypium raimondii Gorai.006G058600 N 0.824
TCM_012484 Theobroma cacao TCM_012484 N 0.819
Eucgr.H00552 Eucalyptus grandis Eucgr.H00552 N 0.819
Aquca_032_00102 Aquilegia coerulea Aquca_032_00102 N 0.812
Aquca_044_00077 Aquilegia coerulea Aquca_044_00077 N 0.812
TCM_017029 Theobroma cacao TCM_017029 N 0.806
GLYMA09G30343 Glycine max GLYMA09G30343 N 0.806
PK00983.1 Cannabis sativa PK00983.1 N 0.800
Cla018720 Citrullus lanatus Cla018720 N 0.794
GLYMA08G06040 Glycine max GLYMA08G06040 N 0.794
GLYMA07G11834 Glycine max GLYMA07G11834 N 0.794
Eucgr.K02284 Eucalyptus grandis Eucgr.K02284 N 0.790
MDP0000280911 Malus domestica MDP0000280911 N 0.769
PRUPE_ppa000543mg Prunus persica PRUPE_ppa000543mg N 0.762
Pm025049 Prunus mume Pm025049 N 0.756
GRMZM2G087787 Zea mays GRMZM2G087787 N 0.756
Sb10g009070 Sorghum bicolor Sb10g009070 N 0.750
Sb04g038100 Sorghum bicolor Sb04g038100 N 0.744
27791.m000083 Ricinus communis 27791.m000083 N 0.738
SapurV1A.0082s0290 Salix purpurea SapurV1A.0082s0290 N 0.731
Bostr.13671s0471 Boechera stricta Bostr.13671s0471 N 0.719
Thhalv10006708m.g Eutrema salsugineum Thhalv10006708m.g N 0.713
Ca_16794 Cicer arietinum Ca_16794 N 0.700
POPTR_0015s05030 Populus trichocarpa POPTR_0015s05030 N 0.700