nfkb1.L (Xenopus laevis)
Rel

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00554 (RHD_DNA_bind) IPR011539 XB-GENE-985749 T317877_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NFKB1
M03448_2.00 		Homo sapiens
MGGGGAWTCCCCT
AGGGGAWTCCCCK		 SELEX
Jolma et al.(2013)
NFKB1_1 		0.781 0.781
NFKB1
M05887_2.00 		Homo sapiens
NGGKRNTYYCCCN
NGGGRRANYMCCN		 SMiLE-seq
Isakova et al.(2017)
NFKB1 		0.781 0.781
NFKB1
M09348_2.00 		Homo sapiens
HYTTCCCY
RGGGAARD		 Misc
Kulakovskiy et al.(2013)
NFKB1_HUMAN.H11MO.0.A 		0.781 0.781
NFKB1
M11228_2.00 		Homo sapiens
GGGGATYCCC
GGGRATCCCC		 Transfac
Matys et al.(2006)
V$NFKAPPAB50_01 		0.781 0.781
NFKB1
M11229_2.00 		Homo sapiens
NGGGAHTYYCCM
KGGRRADTCCCN		 Transfac
Matys et al.(2006)
V$NFKB_C 		0.781 0.781
NFKB1
M11230_2.00 		Homo sapiens
DKGGGAMTTYCCNN
NNGGRAAKTCCCMH		 Transfac
Matys et al.(2006)
V$NFKB_Q6 		0.781 0.781
NFKB1
M11231_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$P50_Q6 		0.781 0.781
Nfkb1
M09358_2.00 		Mus musculus
GGGRNTTYCCC
GGGRAANYCCC		 Misc
Kulakovskiy et al.(2013)
NFKB1_MOUSE.H11MO.0.A 		0.775 0.775
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AAH81252 Rel 43 238

Links

Other Rel family TFs
Other Xenopus laevis TFs

58 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
nfkb1 Xenopus tropicalis XB-GENE-985746 I 0.941
NFKB1 Sus scrofa ENSSSCG00000030957 I 0.881
NFKB1 Homo sapiens ENSG00000109320 D 0.800
ENSOANG00000028755 Ornithorhynchus anatinus ENSOANG00000028755 I 0.787
ENSAMEG00000008882 Ailuropoda melanoleuca ENSAMEG00000008882 I 0.781
NFKB1 Tursiops truncatus ENSTTRG00000010852 I 0.781
NFKB1 Gorilla gorilla ENSGGOG00000009071 I 0.781
NFKB1 Tupaia belangeri ENSTBEG00000003520 I 0.781
NFKB1 Macaca mulatta ENSMMUG00000003736 I 0.781
ENSMPUG00000009413 Mustela putorius furo ENSMPUG00000009413 I 0.781
ENSNLEG00000013325 Nomascus leucogenys ENSNLEG00000013325 I 0.781
NFKB1 Canis familiaris ENSCAFG00000010730 I 0.781
NFKB1 Vicugna pacos ENSVPAG00000000280 I 0.781
NFKB1 Pteropus vampyrus ENSPVAG00000002722 I 0.781
ENSP00000226574 Macaca fascicularis ENSP00000226574 I 0.781
ENSCSAG00000004049 Chlorocebus sabaeus ENSCSAG00000004049 I 0.781
NFKB1 Pan troglodytes ENSPTRG00000016320 I 0.781
Nfkb1 Rattus norvegicus ENSRNOG00000023258 I 0.781
ENSOANG00000022123 Ornithorhynchus anatinus ENSOANG00000022123 I 0.779
ENSOARG00000012718 Ovis aries ENSOARG00000012718 I 0.775
Nfkb1 Mus musculus ENSMUSG00000028163 D 0.775
ENSPPYG00000014965 Pongo abelii ENSPPYG00000014965 I 0.775
NFKB1 Callithrix jacchus ENSCJAG00000015382 I 0.775
ENSSTOG00000011445 Ictidomys tridecemlineatus ENSSTOG00000011445 I 0.775
NFKB1 Bos taurus ENSBTAG00000020270 I 0.775
NFKB1 Myotis lucifugus ENSMLUG00000005986 I 0.775
NFKB1 Dasypus novemcinctus ENSDNOG00000006855 I 0.775
NFKB1 Monodelphis domestica ENSMODG00000020672 I 0.775
NFKB1 Felis catus ENSFCAG00000007557 I 0.775
NFKB1 Loxodonta africana ENSLAFG00000009344 I 0.775
ENSBTAP00000027016-D1 Bos grunniens ENSBTAP00000027016-D1 I 0.775
Myotis_brandtii_NFKB1_10013135 Myotis brandtii Myotis_brandtii_NFKB1_10013135 I 0.775
ENSSHAG00000007374 Sarcophilus harrisii ENSSHAG00000007374 I 0.775
Nfkb1 Dipodomys ordii ENSDORG00000007447 I 0.769
NFKB1 Otolemur garnettii ENSOGAG00000012840 I 0.769
ENSMEUG00000001334 Macropus eugenii ENSMEUG00000001334 I 0.769
NFKB1 Cavia porcellus ENSCPOG00000007789 I 0.763
NFKB1 Ochotona princeps ENSOPRG00000005212 I 0.763
NFKB1 Procavia capensis ENSPCAG00000008172 I 0.763
NFKB1 Taeniopygia guttata ENSTGUG00000003595 I 0.757
NFKB1 Oryctolagus cuniculus ENSOCUG00000021712 I 0.757
ENSFALG00000008136 Ficedula albicollis ENSFALG00000008136 I 0.757
Gfo_R000994 Geospiza fortis Gfo_R000994 I 0.751
Afo_R015662 Aptenodytes forsteri Afo_R015662 I 0.751
NFKB1 Gallus gallus ENSGALG00000012304 I 0.751
Tal_R004861 Tyto alba Tal_R004861 I 0.751
NFKB1 Meleagris gallopavo ENSMGAG00000011299 I 0.751
Brh_R011794 Buceros rhinoceros Brh_R011794 I 0.751
ENSPANG00000023882 Papio anubis ENSPANG00000023882 I 0.751
ENSAPLG00000013878 Anas platyrhynchos ENSAPLG00000013878 I 0.746
Alligator_sinensis_CCG005309.1 Alligator sinensis Alligator_sinensis_CCG005309.1 I 0.746
ENSPSIG00000008515 Pelodiscus sinensis ENSPSIG00000008515 I 0.746
Aan_R012729 Calypte anna Aan_R012729 I 0.746
Pvit_05196 Pogona vitticeps Pvit_05196 I 0.740
NFKB1 Equus caballus ENSECAG00000015042 I 0.728
ENSLOCG00000012080 Lepisosteus oculatus ENSLOCG00000012080 I 0.710
nfkb1 Danio rerio ENSDARG00000105261 I 0.704
ENSLACG00000002751 Latimeria chalumnae ENSLACG00000002751 I 0.704