GSMUA_Achr4G23650_001 (Musa acuminata)
SBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03110 (SBP) IPR004333 GSMUA_Achr4G23650_001 T322655_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK22320.1
M02483_2.00 		Cannabis sativa
NNGTACGGNN
NNCCGTACNN		 PBM
Weirauch et al.(2014)
pTH9723 		0.898 0.800
SPL5
M02474_2.00 		Arabidopsis thaliana
NNGTACGDN
NHCGTACNN		 PBM
Weirauch et al.(2014)
pTH7385 		0.888 0.720
SPL5
M07261_2.00 		Arabidopsis thaliana
NDNYGTACGGAH
DTCCGTACRNHN		 Dap-seq
OMalley et al.(2016)
SPL5_col_a 		0.888 0.720
SPL5
M07262_2.00 		Arabidopsis thaliana
NBGTACGGWH
DWCCGTACVN		 Dap-seq
OMalley et al.(2016)
SPL5_colamp_a 		0.888 0.720
For this family, TFs with SR scores > 0.885 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GSMUA_Achr4P23650_001 SBP 76 150

Links

Other SBP family TFs
Other Musa acuminata TFs

163 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MLOC_13032 Hordeum vulgare MLOC_13032 I 0.966
Traes_2BS_186EA570A Triticum aestivum Traes_2BS_186EA570A I 0.966
TRIUR3_23102 Triticum urartu TRIUR3_23102 I 0.966
BRADI1G26720 Brachypodium distachyon BRADI1G26720 I 0.964
GSMUA_Achr1G08440_001 Musa acuminata GSMUA_Achr1G08440_001 I 0.963
GSMUA_Achr2G03070_001 Musa acuminata GSMUA_Achr2G03070_001 I 0.962
Si010262m.g Setaria italica Si010262m.g I 0.956
GRMZM2G148467 Zea mays GRMZM2G148467 I 0.956
Traes_2AS_C2A4AFE6F Triticum aestivum Traes_2AS_C2A4AFE6F I 0.952
Eucgr.D02505 Eucalyptus grandis Eucgr.D02505 I 0.948
Traes_2BL_69E6AB6D1 Triticum aestivum Traes_2BL_69E6AB6D1 I 0.947
Traes_2AL_B45245746 Triticum aestivum Traes_2AL_B45245746 I 0.947
MLOC_69667 Hordeum vulgare MLOC_69667 I 0.947
F775_02791 Aegilops tauschii F775_02791 I 0.947
Cla021411 Citrullus lanatus Cla021411 I 0.945
GLYMA07G14641 Glycine max GLYMA07G14641 I 0.945
Pavir.Ga01083 Panicum virgatum Pavir.Ga01083 I 0.945
GLYMA03G27195 Glycine max GLYMA03G27195 I 0.945
SapurV1A.0012s0510 Salix purpurea SapurV1A.0012s0510 I 0.944
Bra038324 Brassica rapa Bra038324 I 0.944
Cla009788 Citrullus lanatus Cla009788 I 0.944
SPL6 Arabidopsis thaliana AT1G69170 I 0.944
Pavir.Gb01121 Panicum virgatum Pavir.Gb01121 I 0.943
Lus10018610.g Linum usitatissimum Lus10018610.g I 0.943
Lus10039846.g Linum usitatissimum Lus10039846.g I 0.943
30190.m011329 Ricinus communis 30190.m011329 I 0.943
Bo2g062840 Brassica oleracea Bo2g062840 I 0.943
Si032170m.g Setaria italica Si032170m.g I 0.942
Cucsa.259800 Cucumis sativus Cucsa.259800 I 0.942
evm.TU.supercontig_27.40 Carica papaya evm.TU.supercontig_27.40 I 0.942
Gorai.008G107300 Gossypium raimondii Gorai.008G107300 I 0.942
MDP0000246046 Malus domestica MDP0000246046 I 0.941
MDP0000171877 Malus domestica MDP0000171877 I 0.941
SapurV1A.0032s0360 Salix purpurea SapurV1A.0032s0360 I 0.941
gene04565-v1.0-hybrid Fragaria vesca gene04565-v1.0-hybrid I 0.940
30174.m008805 Ricinus communis 30174.m008805 I 0.939
SapurV1A.0033s0320 Salix purpurea SapurV1A.0033s0320 I 0.939
PRUPE_ppa017695mg Prunus persica PRUPE_ppa017695mg I 0.939
POPTR_0014s05690 Populus trichocarpa POPTR_0014s05690 I 0.939
PK26639.1 Cannabis sativa PK26639.1 I 0.939
Pm030597 Prunus mume Pm030597 I 0.939
MTR_7g444860 Medicago truncatula MTR_7g444860 I 0.938
Pm014154 Prunus mume Pm014154 I 0.938
fgenesh1_pg.C_scaffold_2001253 Arabidopsis lyrata fgenesh1_pg.C_scaffold_2001253 I 0.938
POPTR_0002s14330 Populus trichocarpa POPTR_0002s14330 I 0.938
PRUPE_ppa011968mg Prunus persica PRUPE_ppa011968mg I 0.938
VIT_15s0021g02290 Vitis vinifera VIT_15s0021g02290 I 0.937
GLYMA11G16556 Glycine max GLYMA11G16556 I 0.937
TCM_005620 Theobroma cacao TCM_005620 I 0.937
evm.TU.supercontig_149.2 Carica papaya evm.TU.supercontig_149.2 I 0.937
Aquca_035_00165 Aquilegia coerulea Aquca_035_00165 I 0.936
Gorai.007G087900 Gossypium raimondii Gorai.007G087900 I 0.936
chr3.CM0160.520.nc Lotus japonicus chr3.CM0160.520.nc I 0.933
Ca_10879 Cicer arietinum Ca_10879 I 0.933
cassava17741.valid.m1 Manihot esculenta cassava17741.valid.m1 I 0.933
Lus10015421.g Linum usitatissimum Lus10015421.g I 0.931
Lus10013999.g Linum usitatissimum Lus10013999.g I 0.931
GSMUA_Achr4G26940_001 Musa acuminata GSMUA_Achr4G26940_001 I 0.931
MTR_2g014200 Medicago truncatula MTR_2g014200 I 0.930
SPL3 Vitis vinifera VIT_10s0003g00050 I 0.929
Sb06g024630 Sorghum bicolor Sb06g024630 I 0.927
gene17738-v1.0-hybrid Fragaria vesca gene17738-v1.0-hybrid I 0.926
Ciclev10020532m.g Citrus clementina Ciclev10020532m.g I 0.926
orange1.1g017256m.g Citrus sinensis orange1.1g017256m.g I 0.926
GSMUA_Achr5G13440_001 Musa acuminata GSMUA_Achr5G13440_001 I 0.925
GLYMA01G08056 Glycine max GLYMA01G08056 I 0.922
GLYMA02G13371 Glycine max GLYMA02G13371 I 0.922
Solyc10g009080.2 Solanum lycopersicum Solyc10g009080.2 I 0.921
Pm010075 Prunus mume Pm010075 I 0.918
MTR_5g046670 Medicago truncatula MTR_5g046670 I 0.918
gene00196-v1.0-hybrid Fragaria vesca gene00196-v1.0-hybrid I 0.918
PRUPE_ppa012607mg Prunus persica PRUPE_ppa012607mg I 0.918
mgf011616m Mimulus guttatus mgf011616m I 0.916
Cagra.0537s0003 Capsella grandiflora Cagra.0537s0003 I 0.915
Thhalv10018638m.g Eutrema salsugineum Thhalv10018638m.g I 0.915
Carubv10020369m.g Capsella rubella Carubv10020369m.g I 0.915
OB04G27960 Oryza brachyantha OB04G27960 I 0.913
Ciclev10019546m.g Citrus clementina Ciclev10019546m.g I 0.912
orange1.1g008680m.g Citrus sinensis orange1.1g008680m.g I 0.912
OGLUM04G20870 Oryza glumaepatula OGLUM04G20870 I 0.911
OMERI04G17360 Oryza meridionalis OMERI04G17360 I 0.911
BGIOSGA016888 Oryza indica BGIOSGA016888 I 0.911
OBART04G20940 Oryza barthii OBART04G20940 I 0.911
ORGLA04G0180000 Oryza glaberrima ORGLA04G0180000 I 0.911
OPUNC04G18620 Oryza punctata OPUNC04G18620 I 0.911
ONIVA04G19190 Oryza nivara ONIVA04G19190 I 0.911
ORUFI04G22540 Oryza rufipogon ORUFI04G22540 I 0.911
SPL7 Oryza sativa OS04G0551500 I 0.911
BGIOSGA024253 Oryza indica BGIOSGA024253 I 0.909
ORUFI07G16070 Oryza rufipogon ORUFI07G16070 I 0.909
OGLUM07G15250 Oryza glumaepatula OGLUM07G15250 I 0.909
MDP0000119458 Malus domestica MDP0000119458 I 0.909
GLYMA15G08270 Glycine max GLYMA15G08270 I 0.909
OBART07G15570 Oryza barthii OBART07G15570 I 0.909
MDP0000193702 Malus domestica MDP0000193702 I 0.909
OMERI07G12270 Oryza meridionalis OMERI07G12270 I 0.909
ONIVA07G14170 Oryza nivara ONIVA07G14170 I 0.909
GLYMA13G31090 Glycine max GLYMA13G31090 I 0.908
gw1.313.30.1 Physcomitrella patens gw1.313.30.1 I 0.907
PGSC0003DMG400022824 Solanum tuberosum PGSC0003DMG400022824 I 0.906
Eucgr.F03303 Eucalyptus grandis Eucgr.F03303 I 0.906
MDP0000158607 Malus domestica MDP0000158607 I 0.906
Aquca_033_00055 Aquilegia coerulea Aquca_033_00055 I 0.906
chr6.CM0114.270.nc Lotus japonicus chr6.CM0114.270.nc I 0.906
LPERR04G17030 Leersia perrieri LPERR04G17030 I 0.904
Gorai.007G116100 Gossypium raimondii Gorai.007G116100 I 0.904
POPTR_0004s04630 Populus trichocarpa POPTR_0004s04630 I 0.903
GLYMA06G36140 Glycine max GLYMA06G36140 I 0.902
Sb02g034180 Sorghum bicolor Sb02g034180 N 0.902
Gorai.004G047200 Gossypium raimondii Gorai.004G047200 I 0.902
mgf025134m Mimulus guttatus mgf025134m I 0.902
chr3.CM0282.980.nc Lotus japonicus chr3.CM0282.980.nc I 0.902
Ca_16243 Cicer arietinum Ca_16243 I 0.901
MTR_8g463140 Medicago truncatula MTR_8g463140 I 0.901
GLYMA12G27330 Glycine max GLYMA12G27330 I 0.901
orange1.1g032937m.g Citrus sinensis orange1.1g032937m.g I 0.900
Cucsa.196000 Cucumis sativus Cucsa.196000 I 0.900
Ciclev10009879m.g Citrus clementina Ciclev10009879m.g I 0.900
cassava37839.valid.m1 Manihot esculenta cassava37839.valid.m1 I 0.898
AMTR_s00106p00142470 Amborella trichopoda AMTR_s00106p00142470 I 0.898
VIT_04s0210g00170 Vitis vinifera VIT_04s0210g00170 N 0.898
PK22320.1 Cannabis sativa PK22320.1 D 0.898
VIT_12s0028g03350 Vitis vinifera VIT_12s0028g03350 I 0.897
Ciclev10016841m.g Citrus clementina Ciclev10016841m.g I 0.897
SapurV1A.0176s0510 Salix purpurea SapurV1A.0176s0510 I 0.896
Carubv10014636m.g Capsella rubella Carubv10014636m.g I 0.895
Cagra.0007s0069 Capsella grandiflora Cagra.0007s0069 I 0.895
POPTR_0008s09810 Populus trichocarpa POPTR_0008s09810 I 0.894
Cla023735 Citrullus lanatus Cla023735 I 0.894
PRUPE_ppa022739mg Prunus persica PRUPE_ppa022739mg I 0.894
VIT_19s0014g02350 Vitis vinifera VIT_19s0014g02350 I 0.894
Pm011381 Prunus mume Pm011381 I 0.894
28211.m000132 Ricinus communis 28211.m000132 I 0.894
TCM_008150 Theobroma cacao TCM_008150 I 0.893
Bra021880 Brassica rapa Bra021880 I 0.893
MTR_4g088555 Medicago truncatula MTR_4g088555 I 0.892
orange1.1g029650m.g Citrus sinensis orange1.1g029650m.g I 0.891
evm.TU.supercontig_80.88 Carica papaya evm.TU.supercontig_80.88 I 0.890
gene29726-v1.0-hybrid Fragaria vesca gene29726-v1.0-hybrid I 0.890
Bra004363 Brassica rapa Bra004363 N 0.890
LjSGA_121222.1 Lotus japonicus LjSGA_121222.1 I 0.890
Eucgr.B00631 Eucalyptus grandis Eucgr.B00631 I 0.889
Bo6g108620 Brassica oleracea Bo6g108620 N 0.889
MDP0000589558 Malus domestica MDP0000589558 I 0.889
29983.m003158 Ricinus communis 29983.m003158 I 0.889
Pm025028 Prunus mume Pm025028 I 0.889
Gorai.003G102800 Gossypium raimondii Gorai.003G102800 I 0.889
gene26117-v1.0-hybrid Fragaria vesca gene26117-v1.0-hybrid I 0.889
PRUPE_ppa003644mg Prunus persica PRUPE_ppa003644mg I 0.889
Ca_24655 Cicer arietinum Ca_24655 I 0.888
Cagra.1472s0017 Capsella grandiflora Cagra.1472s0017 I 0.888
SPL5 Arabidopsis thaliana AT3G15270 D 0.888
orange1.1g009653m.g Citrus sinensis orange1.1g009653m.g I 0.888
Ciclev10031270m.g Citrus clementina Ciclev10031270m.g I 0.888
TCM_011483 Theobroma cacao TCM_011483 I 0.888
Ciclev10017104m.g Citrus clementina Ciclev10017104m.g I 0.888
Carubv10010422m.g Capsella rubella Carubv10010422m.g I 0.888
SapurV1A.0382s0120 Salix purpurea SapurV1A.0382s0120 I 0.887
MTR_1g035010 Medicago truncatula MTR_1g035010 I 0.887
GLYMA07G19770 Glycine max GLYMA07G19770 I 0.887
GLYMA20G00900 Glycine max GLYMA20G00900 I 0.887
orange1.1g032310m.g Citrus sinensis orange1.1g032310m.g I 0.886
Eucgr.K01046 Eucalyptus grandis Eucgr.K01046 I 0.886