POPTR_0009s10610 (Populus trichocarpa)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02362 (B3) IPR003340 POPTR_0009s10610 T020879_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0009s10610.1 B3 74 165

Links

Other B3 family TFs
Other Populus trichocarpa TFs

1 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29729.m002278 Ricinus communis 29729.m002278 I
30111.m000703 Ricinus communis 30111.m000703 I
30169.m006340 Ricinus communis 30169.m006340 I
AC214648.3_FG005 Zea mays AC214648.3_FG005 I
AMTR_s00080p00153120 Amborella trichopoda AMTR_s00080p00153120 N
Aquca_027_00112 Aquilegia coerulea Aquca_027_00112 N
Aquca_030_00227 Aquilegia coerulea Aquca_030_00227 I
Aquca_118_00035 Aquilegia coerulea Aquca_118_00035 I
LBD4 Arabidopsis thaliana AT1G31320 D
LBD11 Arabidopsis thaliana AT2G28500 N
BGIOSGA010952 Oryza indica BGIOSGA010952 N
BGIOSGA038947 Oryza indica BGIOSGA038947 N
Bo01039s010 Brassica oleracea Bo01039s010 N
Bo3g040220 Brassica oleracea Bo3g040220 N
Bo4g165420 Brassica oleracea Bo4g165420 N
Bo5g008590 Brassica oleracea Bo5g008590 N
Bo8g112780 Brassica oleracea Bo8g112780 N
Bostr.15697s0446 Boechera stricta Bostr.15697s0446 I
Bostr.25219s0157 Boechera stricta Bostr.25219s0157 N
Bostr.27991s0074 Boechera stricta Bostr.27991s0074 N
Bra000491 Brassica rapa Bra000491 N
Bra011942 Brassica rapa Bra011942 N
Bra014907 Brassica rapa Bra014907 I
Bra018675 Brassica rapa Bra018675 N
Bra031599 Brassica rapa Bra031599 N
Bra035698 Brassica rapa Bra035698 N
BRADI1G65760 Brachypodium distachyon BRADI1G65760 N
BRADI4G44850 Brachypodium distachyon BRADI4G44850 I
Cagra.1508s0061 Capsella grandiflora Cagra.1508s0061 I
Cagra.1671s0410 Capsella grandiflora Cagra.1671s0410 N
Cagra.9128s0007 Capsella grandiflora Cagra.9128s0007 N
Carubv10010390m.g Capsella rubella Carubv10010390m.g N
Carubv10010462m.g Capsella rubella Carubv10010462m.g I
Carubv10023989m.g Capsella rubella Carubv10023989m.g N
cassava11218.m1 Manihot esculenta cassava11218.m1 I
cassava20471.m1 Manihot esculenta cassava20471.m1 I
cassava20865.m1 Manihot esculenta cassava20865.m1 I
cassava26200.m1 Manihot esculenta cassava26200.m1 I
cassava27818.m1 Manihot esculenta cassava27818.m1 I
cassava30732.valid.m1 Manihot esculenta cassava30732.valid.m1 I
cassava40961.m1 Manihot esculenta cassava40961.m1 I
cassava44959.m1 Manihot esculenta cassava44959.m1 N
cassava819.valid.m1 Manihot esculenta cassava819.valid.m1 I
Ca_02507 Cicer arietinum Ca_02507 N
Ca_04287 Cicer arietinum Ca_04287 I
Ca_06548 Cicer arietinum Ca_06548 I
Ca_13575 Cicer arietinum Ca_13575 I
Ca_14605 Cicer arietinum Ca_14605 I
chr3.CM0246.260.nc Lotus japonicus chr3.CM0246.260.nc N
chr4.CM0229.130.nc Lotus japonicus chr4.CM0229.130.nc I
Ciclev10006113m.g Citrus clementina Ciclev10006113m.g I
Ciclev10016993m.g Citrus clementina Ciclev10016993m.g I
Ciclev10029283m.g Citrus clementina Ciclev10029283m.g I
Ciclev10029962m.g Citrus clementina Ciclev10029962m.g I
Ciclev10032772m.g Citrus clementina Ciclev10032772m.g I
Ciclev10032782m.g Citrus clementina Ciclev10032782m.g N
Ciclev10032929m.g Citrus clementina Ciclev10032929m.g I
Ciclev10033956m.g Citrus clementina Ciclev10033956m.g I
Cla000556 Citrullus lanatus Cla000556 I
Cla005133 Citrullus lanatus Cla005133 N
Cla005134 Citrullus lanatus Cla005134 N
Cla013678 Citrullus lanatus Cla013678 I
Cla020379 Citrullus lanatus Cla020379 I
CM1887.100.nc Lotus japonicus CM1887.100.nc I
Cucsa.052720 Cucumis sativus Cucsa.052720 I
Cucsa.118370 Cucumis sativus Cucsa.118370 I
Cucsa.166030 Cucumis sativus Cucsa.166030 N
Cucsa.207390 Cucumis sativus Cucsa.207390 N
Cucsa.207400 Cucumis sativus Cucsa.207400 N
Cucsa.239660 Cucumis sativus Cucsa.239660 I
Cucsa.275710 Cucumis sativus Cucsa.275710 N
Eucgr.B02465 Eucalyptus grandis Eucgr.B02465 I
Eucgr.E02016 Eucalyptus grandis Eucgr.E02016 I
Eucgr.F04424 Eucalyptus grandis Eucgr.F04424 I
Eucgr.G03089 Eucalyptus grandis Eucgr.G03089 I
Eucgr.J00175 Eucalyptus grandis Eucgr.J00175 I
Eucgr.J01123 Eucalyptus grandis Eucgr.J01123 I
evm.TU.supercontig_192.6 Carica papaya evm.TU.supercontig_192.6 I
evm.TU.supercontig_53.26 Carica papaya evm.TU.supercontig_53.26 N
F775_02335 Aegilops tauschii F775_02335 N
F775_08326 Aegilops tauschii F775_08326 I
LBD1 Arabidopsis lyrata fgenesh1_pm.C_scaffold_1000623 N
LBD4 Arabidopsis lyrata fgenesh1_pm.C_scaffold_1002773 I
LBD11 Arabidopsis lyrata fgenesh2_kg.4__820__AT2G28500.1 N
gene20083-v1.0-hybrid Fragaria vesca gene20083-v1.0-hybrid I
gene23226-v1.0-hybrid Fragaria vesca gene23226-v1.0-hybrid N
gene30046-v1.0-hybrid Fragaria vesca gene30046-v1.0-hybrid I
GLYMA07G35000 Glycine max GLYMA07G35000 I
GLYMA08G17990 Glycine max GLYMA08G17990 I
GLYMA09G02510 Glycine max GLYMA09G02510 I
GLYMA10G35760 Glycine max GLYMA10G35760 I
GLYMA11G15810 Glycine max GLYMA11G15810 N
GLYMA12G07650 Glycine max GLYMA12G07650 I
GLYMA13G40370 Glycine max GLYMA13G40370 I
GLYMA15G05030 Glycine max GLYMA15G05030 I
GLYMA15G13410 Glycine max GLYMA15G13410 I
GLYMA20G02850 Glycine max GLYMA20G02850 I
GLYMA20G31780 Glycine max GLYMA20G31780 I
Gorai.001G129700 Gossypium raimondii Gorai.001G129700 I
Gorai.002G104500 Gossypium raimondii Gorai.002G104500 I
Gorai.004G012800 Gossypium raimondii Gorai.004G012800 I
Gorai.006G120900 Gossypium raimondii Gorai.006G120900 I
Gorai.009G149900 Gossypium raimondii Gorai.009G149900 I
Gorai.010G195100 Gossypium raimondii Gorai.010G195100 I
Gorai.010G203800 Gossypium raimondii Gorai.010G203800 I
Gorai.011G051200 Gossypium raimondii Gorai.011G051200 I
Gorai.011G290800 Gossypium raimondii Gorai.011G290800 I
Gorai.012G094200 Gossypium raimondii Gorai.012G094200 N
Gorai.013G002900 Gossypium raimondii Gorai.013G002900 I
GRMZM2G021095 Zea mays GRMZM2G021095 N
GRMZM2G079185 Zea mays GRMZM2G079185 I
GRMZM2G145568 Zea mays GRMZM2G145568 N
GRMZM2G165805 Zea mays GRMZM2G165805 N
GRMZM2G447176 Zea mays GRMZM2G447176 I
GSMUA_Achr10G13050_001 Musa acuminata GSMUA_Achr10G13050_001 I
GSMUA_Achr10G14880_001 Musa acuminata GSMUA_Achr10G14880_001 I
GSMUA_Achr10G22970_001 Musa acuminata GSMUA_Achr10G22970_001 I
GSMUA_Achr3G17800_001 Musa acuminata GSMUA_Achr3G17800_001 N
GSMUA_Achr4G16790_001 Musa acuminata GSMUA_Achr4G16790_001 N
GSMUA_Achr6G33070_001 Musa acuminata GSMUA_Achr6G33070_001 I
GSMUA_Achr7G15500_001 Musa acuminata GSMUA_Achr7G15500_001 I
GSMUA_Achr8G09700_001 Musa acuminata GSMUA_Achr8G09700_001 N
LPERR03G11720 Leersia perrieri LPERR03G11720 N
LPERR05G01520 Leersia perrieri LPERR05G01520 N
Lus10011645.g Linum usitatissimum Lus10011645.g I
Lus10031191.g Linum usitatissimum Lus10031191.g I
Lus10031769.g Linum usitatissimum Lus10031769.g I
Lus10036130.g Linum usitatissimum Lus10036130.g I
Lus10040373.g Linum usitatissimum Lus10040373.g I
MDP0000121203 Malus domestica MDP0000121203 I
MDP0000123013 Malus domestica MDP0000123013 I
MDP0000151784 Malus domestica MDP0000151784 I
MDP0000218986 Malus domestica MDP0000218986 I
MDP0000268890 Malus domestica MDP0000268890 I
MDP0000284409 Malus domestica MDP0000284409 I
MDP0000318244 Malus domestica MDP0000318244 I
MDP0000319331 Malus domestica MDP0000319331 I
MDP0000822986 Malus domestica MDP0000822986 I
MDP0000879799 Malus domestica MDP0000879799 N
mgf015666m Mimulus guttatus mgf015666m N
mgf018189m Mimulus guttatus mgf018189m I
mgf019622m Mimulus guttatus mgf019622m N
mgf022524m Mimulus guttatus mgf022524m N
mgf026046m Mimulus guttatus mgf026046m I
MLOC_5148 Hordeum vulgare MLOC_5148 I
MLOC_68570 Hordeum vulgare MLOC_68570 N
MTR_1g095850 Medicago truncatula MTR_1g095850 I
MTR_2g068760 Medicago truncatula MTR_2g068760 I
MTR_2g093310 Medicago truncatula MTR_2g093310 I
MTR_4g060950 Medicago truncatula MTR_4g060950 I
MTR_4g083680 Medicago truncatula MTR_4g083680 I
OB03G23270 Oryza brachyantha OB03G23270 N
OB05G11740 Oryza brachyantha OB05G11740 I
OBART03G13260 Oryza barthii OBART03G13260 N
OGLUM03G13350 Oryza glumaepatula OGLUM03G13350 N
OMERI03G12370 Oryza meridionalis OMERI03G12370 N
ONIVA03G14510 Oryza nivara ONIVA03G14510 N
ONIVA05G01850 Oryza nivara ONIVA05G01850 I
OPUNC03G12790 Oryza punctata OPUNC03G12790 N
OPUNC03G25820 Oryza punctata OPUNC03G25820 I
orange1.1g026556m.g Citrus sinensis orange1.1g026556m.g I
orange1.1g031034m.g Citrus sinensis orange1.1g031034m.g I
orange1.1g036782m.g Citrus sinensis orange1.1g036782m.g I
orange1.1g044340m.g Citrus sinensis orange1.1g044340m.g I
orange1.1g045080m.g Citrus sinensis orange1.1g045080m.g I
orange1.1g047491m.g Citrus sinensis orange1.1g047491m.g I
ORGLA03G0128100 Oryza glaberrima ORGLA03G0128100 N
ORGLA05G0016500 Oryza glaberrima ORGLA05G0016500 N
ORUFI03G13900 Oryza rufipogon ORUFI03G13900 N
OS03G0287400 Oryza sativa OS03G0287400 N
Pavir.Ca00718 Panicum virgatum Pavir.Ca00718 I
Pavir.Ia01095 Panicum virgatum Pavir.Ia01095 I
Pavir.Ia03612 Panicum virgatum Pavir.Ia03612 N
Pavir.Ib01336 Panicum virgatum Pavir.Ib01336 N
Pavir.Ib04170 Panicum virgatum Pavir.Ib04170 I
Pavir.J04684 Panicum virgatum Pavir.J04684 I
Pavir.J06256 Panicum virgatum Pavir.J06256 I
Pavir.J13923 Panicum virgatum Pavir.J13923 I
Pavir.J18260 Panicum virgatum Pavir.J18260 I
PGSC0003DMG400004138 Solanum tuberosum PGSC0003DMG400004138 N
PGSC0003DMG400007503 Solanum tuberosum PGSC0003DMG400007503 I
PGSC0003DMG400008649 Solanum tuberosum PGSC0003DMG400008649 I
PGSC0003DMG400025384 Solanum tuberosum PGSC0003DMG400025384 N
PGSC0003DMG400025400 Solanum tuberosum PGSC0003DMG400025400 I
PGSC0003DMG400030456 Solanum tuberosum PGSC0003DMG400030456 I
PK11564.1 Cannabis sativa PK11564.1 I
PK23777.1 Cannabis sativa PK23777.1 I
PK24688.1 Cannabis sativa PK24688.1 I
PK27389.1 Cannabis sativa PK27389.1 I
Pm000938 Prunus mume Pm000938 I
Pm011040 Prunus mume Pm011040 I
Pm018585 Prunus mume Pm018585 I
Pm018982 Prunus mume Pm018982 I
POPTR_0001s11610 Populus trichocarpa POPTR_0001s11610 I
POPTR_0003s14880 Populus trichocarpa POPTR_0003s14880 I
POPTR_0007s08290 Populus trichocarpa POPTR_0007s08290 I
POPTR_0008s04350 Populus trichocarpa POPTR_0008s04350 I
POPTR_0008s07280 Populus trichocarpa POPTR_0008s07280 I
POPTR_0010s22470 Populus trichocarpa POPTR_0010s22470 I
PRUPE_ppa011528mg Prunus persica PRUPE_ppa011528mg I
PRUPE_ppa012253mg Prunus persica PRUPE_ppa012253mg I
PRUPE_ppa012322mg Prunus persica PRUPE_ppa012322mg I
PRUPE_ppa012504mg Prunus persica PRUPE_ppa012504mg I
PRUPE_ppa023989mg Prunus persica PRUPE_ppa023989mg I
SapurV1A.0023s0430 Salix purpurea SapurV1A.0023s0430 I
SapurV1A.0038s0110 Salix purpurea SapurV1A.0038s0110 I
SapurV1A.0059s0540 Salix purpurea SapurV1A.0059s0540 I
SapurV1A.0061s0670 Salix purpurea SapurV1A.0061s0670 I
SapurV1A.0085s0450 Salix purpurea SapurV1A.0085s0450 I
SapurV1A.0094s0480 Salix purpurea SapurV1A.0094s0480 I
SapurV1A.0284s0080 Salix purpurea SapurV1A.0284s0080 I
SapurV1A.0673s0190 Salix purpurea SapurV1A.0673s0190 I
Sb01g012810 Sorghum bicolor Sb01g012810 I
Sb01g038650 Sorghum bicolor Sb01g038650 N
Sb09g002190 Sorghum bicolor Sb09g002190 I
SELMODRAFT_48883 Selaginella moellendorffii SELMODRAFT_48883 I
SELMODRAFT_58936 Selaginella moellendorffii SELMODRAFT_58936 I
Si024430m.g Setaria italica Si024430m.g N
Si026864m.g Setaria italica Si026864m.g I
Si037280m.g Setaria italica Si037280m.g N
Si037583m.g Setaria italica Si037583m.g I
Solyc04g050010.1 Solanum lycopersicum Solyc04g050010.1 N
Solyc05g048740.2 Solanum lycopersicum Solyc05g048740.2 I
Solyc06g005090.2 Solanum lycopersicum Solyc06g005090.2 I
Solyc06g075330.1 Solanum lycopersicum Solyc06g075330.1 N
Solyc06g082310.2 Solanum lycopersicum Solyc06g082310.2 I
Solyc11g045530.1 Solanum lycopersicum Solyc11g045530.1 I
Solyc11g072470.1 Solanum lycopersicum Solyc11g072470.1 I
TCM_029315 Theobroma cacao TCM_029315 I
TCM_032557 Theobroma cacao TCM_032557 I
TCM_041094 Theobroma cacao TCM_041094 I
TCM_042447 Theobroma cacao TCM_042447 I
TCM_043081 Theobroma cacao TCM_043081 I
Thhalv10008781m.g Eutrema salsugineum Thhalv10008781m.g N
Thhalv10008917m.g Eutrema salsugineum Thhalv10008917m.g I
Thhalv10017165m.g Eutrema salsugineum Thhalv10017165m.g N
Traes_1AS_26CB95294 Triticum aestivum Traes_1AS_26CB95294 N
Traes_1BS_CE38938A8 Triticum aestivum Traes_1BS_CE38938A8 N
Traes_1DS_A31FB6CB2 Triticum aestivum Traes_1DS_A31FB6CB2 N
Traes_4AS_669BAF6C7 Triticum aestivum Traes_4AS_669BAF6C7 N
Traes_4BL_97EDABD02 Triticum aestivum Traes_4BL_97EDABD02 N
Traes_5BL_CE4CF3B5C Triticum aestivum Traes_5BL_CE4CF3B5C I
TRIUR3_11082 Triticum urartu TRIUR3_11082 I
LBD4 Vitis vinifera VIT_00s0125g00290 I
VIT_06s0004g03330 Vitis vinifera VIT_06s0004g03330 I
VIT_06s0004g03350 Vitis vinifera VIT_06s0004g03350 I
VIT_13s0019g03700 Vitis vinifera VIT_13s0019g03700 I
VIT_13s0019g03710 Vitis vinifera VIT_13s0019g03710 N
VIT_13s0019g03720 Vitis vinifera VIT_13s0019g03720 N
VIT_13s0019g03750 Vitis vinifera VIT_13s0019g03750 N
VIT_13s0019g03760 Vitis vinifera VIT_13s0019g03760 N
VIT_13s0019g03780 Vitis vinifera VIT_13s0019g03780 N
VIT_13s0019g03810 Vitis vinifera VIT_13s0019g03810 N
VIT_13s0019g03820 Vitis vinifera VIT_13s0019g03820 N
VIT_13s0019g03830 Vitis vinifera VIT_13s0019g03830 N
VIT_13s0019g03840 Vitis vinifera VIT_13s0019g03840 N
VIT_13s0067g01880 Vitis vinifera VIT_13s0067g01880 I
LBD3 Vitis vinifera VIT_19s0027g01120 I