NEUROD1 (Otolemur garnettii)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSOGAG00000025613 T036143_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NEUROD1
M04148_2.00 		Homo sapiens
RMCATATGKYVNNNTAWTT
AAWTANNNBRMCATATGKY		 SELEX
Yin et al.(2017)
NEUROD1_FL_HT-SELEX 		0.914 1.000
NEUROD1
M08057_2.00 		Homo sapiens
NNVCAGATGGNNN
NNNCCATCTGBNN		 ChIP-seq
Mathelier et al.(2014)
MA1109.1 		0.914 1.000
NEUROD1
M08735_2.00 		Homo sapiens
RVCAGATGGY
RCCATCTGBY		 Misc
Kulakovskiy et al.(2013)
NDF1_HUMAN.H11MO.0.A 		0.914 1.000
Neurod1
M08764_2.00 		Mus musculus
RVCAGATGGY
RCCATCTGBY		 Misc
Kulakovskiy et al.(2013)
NDF1_MOUSE.H11MO.0.A 		0.914 1.000
Neurod1
M09474_2.00 		Mus musculus
RVCAGATGGY
RCCATCTGBY		 Misc
Heinz et al.(2010)
Islet-NeuroD1_GSE30298 		0.914 1.000
NEUROD1
M09873_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NEUROD_01 		0.914 1.000
NEUROD1
M09874_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NEUROD_02 		0.914 1.000
NEUROD1
M04149_2.00 		Homo sapiens
RVCATATGBYVYNBTAWTW
WAWTAVNRBRVCATATGBY		 SELEX
Yin et al.(2017)
NEUROD1_FL_Methyl-HT-SELEX 		0.914 1.000
NEUROD2
M02795_2.00 		Homo sapiens
RVCATATGKY
RMCATATGBY		 SELEX
Jolma et al.(2013)
NEUROD2_1 		0.879 0.962
NEUROD2
M04160_2.00 		Homo sapiens
RVCATATGKY
RMCATATGBY		 SELEX
Yin et al.(2017)
NEUROD2_FL_HT-SELEX 		0.879 0.962
NEUROD2
M08737_2.00 		Homo sapiens
RRCAGMTGG
CCAKCTGYY		 Misc
Kulakovskiy et al.(2013)
NDF2_HUMAN.H11MO.0.B 		0.879 0.962
Neurod2
M08770_2.00 		Mus musculus
RVCAGATGGB
VCCATCTGBY		 Misc
Kulakovskiy et al.(2013)
NDF2_MOUSE.H11MO.0.A 		0.879 0.962
NEUROD2
M04161_2.00 		Homo sapiens
RMCATATGBY
RVCATATGKY		 SELEX
Yin et al.(2017)
NEUROD2_FL_Methyl-HT-SELEX 		0.879 0.962
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSOGAP00000021379 bHLH 102 154

Links

Other bHLH family TFs
Other Otolemur garnettii TFs

269 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
C1orf35 Otolemur garnettii ENSOGAG00000010978 I 0.000
RGD1304587 Rattus norvegicus ENSRNOG00000002944 I 0.000
F775_06914 Aegilops tauschii F775_06914 N 0.000
GRMZM2G164735 Zea mays GRMZM2G164735 N 0.000
GRMZM2G166230 Zea mays GRMZM2G166230 N 0.000
GRMZM2G179366 Zea mays GRMZM2G179366 N 0.000
MLOC_13459 Hordeum vulgare MLOC_13459 N 0.000
OMERI10G00680 Oryza meridionalis OMERI10G00680 I 0.000
OS03G0237401 Oryza sativa OS03G0237401 N 0.000
Pavir.Ba02367 Panicum virgatum Pavir.Ba02367 N 0.000
Pavir.Bb00953 Panicum virgatum Pavir.Bb00953 N 0.000
Pavir.Ia04968 Panicum virgatum Pavir.Ia04968 N 0.000
Pavir.J31488 Panicum virgatum Pavir.J31488 N 0.000
Sb02g009750 Sorghum bicolor Sb02g009750 N 0.000
Sb10g004880 Sorghum bicolor Sb10g004880 N 0.000
Si029480m.g Setaria italica Si029480m.g N 0.000
Si036337m.g Setaria italica Si036337m.g N 0.000
Traes_4AS_48979CBE1 Triticum aestivum Traes_4AS_48979CBE1 N 0.000
Traes_4BL_011308A76 Triticum aestivum Traes_4BL_011308A76 I 0.000
Traes_4DL_AE5093871 Triticum aestivum Traes_4DL_AE5093871 N 0.000