CIMG_00576 (Coccidioides immitis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 CIMG_00576 T077263_2.00 Broad (2016-May-1)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HCBG_04116
M01448_2.00 		Histoplasma capsulatum
RHCHGWGCDB
VHGCWCDGDY		 PBM
Najafabadi et al.(2015a)
pTH11149 		0.825 0.978
NCU03975
M01879_2.00 		Neurospora crassa
NNRCWYDDNN
NNHHRWGYNN		 PBM
Weirauch et al.(2014)
pTH9677 		0.795 0.902
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CIMG_00576T0 C2H2 ZF 119 141
CIMG_00576T0 C2H2 ZF 147 171
CIMG_00576T0 C2H2 ZF 177 199
CIMG_00576T0 C2H2 ZF 205 229

Links

Other C2H2 ZF family TFs
Other Coccidioides immitis TFs

130 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA032378 Oryza indica BGIOSGA032378 N 0.000
BGIOSGA032380 Oryza indica BGIOSGA032380 N 0.000
BRADI3G21380 Brachypodium distachyon BRADI3G21380 N 0.000
BRADI3G21390 Brachypodium distachyon BRADI3G21390 N 0.000
C1orf35 Otolemur garnettii ENSOGAG00000010978 I 0.000
RGD1304587 Rattus norvegicus ENSRNOG00000002944 I 0.000
F775_06914 Aegilops tauschii F775_06914 N 0.000
GRMZM2G164735 Zea mays GRMZM2G164735 N 0.000
GRMZM2G179366 Zea mays GRMZM2G179366 N 0.000
LPERR10G00500 Leersia perrieri LPERR10G00500 N 0.000
LPERR10G00510 Leersia perrieri LPERR10G00510 N 0.000
MLOC_13459 Hordeum vulgare MLOC_13459 N 0.000
OB10G10530 Oryza brachyantha OB10G10530 N 0.000
OB10G10650 Oryza brachyantha OB10G10650 N 0.000
OBART10G00640 Oryza barthii OBART10G00640 N 0.000
OGLUM10G00620 Oryza glumaepatula OGLUM10G00620 N 0.000
OGLUM10G00630 Oryza glumaepatula OGLUM10G00630 N 0.000
OLONG_022525 Oryza longistaminata OLONG_022525 N 0.000
OMERI10G00680 Oryza meridionalis OMERI10G00680 I 0.000
OMERI10G00690 Oryza meridionalis OMERI10G00690 N 0.000
ONIVA10G01080 Oryza nivara ONIVA10G01080 N 0.000
OPUNC03G13410 Oryza punctata OPUNC03G13410 N 0.000
OPUNC10G00600 Oryza punctata OPUNC10G00600 N 0.000
ORUFI10G00640 Oryza rufipogon ORUFI10G00640 N 0.000
OS03G0237401 Oryza sativa OS03G0237401 N 0.000
OS10G0114500 Oryza sativa OS10G0114500 N 0.000
OS10G0115200 Oryza sativa OS10G0115200 N 0.000
Pavir.Ba02367 Panicum virgatum Pavir.Ba02367 N 0.000
Pavir.Bb00953 Panicum virgatum Pavir.Bb00953 N 0.000
Pavir.Ia04968 Panicum virgatum Pavir.Ia04968 N 0.000
Pavir.J31488 Panicum virgatum Pavir.J31488 N 0.000
Sb02g009750 Sorghum bicolor Sb02g009750 N 0.000
Sb02g009782 Sorghum bicolor Sb02g009782 N 0.000
Sb10g004880 Sorghum bicolor Sb10g004880 N 0.000
Si029480m.g Setaria italica Si029480m.g N 0.000
Traes_4AS_48979CBE1 Triticum aestivum Traes_4AS_48979CBE1 N 0.000
Traes_4DL_AE5093871 Triticum aestivum Traes_4DL_AE5093871 N 0.000