CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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KLF4
(
Otolemur garnettii
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSOGAG00000029918
T103767_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
KLF4
M04463_2.00
Homo sapiens
NVCCACRCCCH
DGGGYGTGGBN
SELEX
Yin et al.(2017)
KLF4_eDBD_HT-SELEX
0.827
1.000
KLF4
M08091_2.00
Homo sapiens
MCACACCCWNN
NNWGGGTGTGK
ChIP-seq
Mathelier et al.(2014)
MA0039.3
0.827
1.000
Klf4
M08021_2.00
Mus musculus
VRCCMCRCCCH
DGGGYGKGGYB
ChIP-seq
Chen et al.(2011)
SRP000217_Klf4
0.827
1.000
KLF4
M08243_2.00
Homo sapiens
RCCMCRCCCH
DGGGYGKGGY
ChIP-seq
Najafabadi et al.(2015b)
KLF14
0.827
1.000
KLF4
M08894_2.00
Homo sapiens
RCCMCRCCCH
DGGGYGKGGY
Misc
Kulakovskiy et al.(2013)
KLF4_HUMAN.H11MO.0.A
0.827
1.000
Klf4
M08964_2.00
Mus musculus
GCCMCRCCCWBYBBN
NVVRVWGGGYGKGGC
Misc
Kulakovskiy et al.(2013)
KLF4_MOUSE.H11MO.0.A
0.827
1.000
KLF4
M10217_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GKLF_02
0.827
1.000
KLF4
M10218_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GKLF_Q3_01
0.827
1.000
KLF4
M10219_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GKLF_Q3
0.827
1.000
KLF4
M10220_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GKLF_Q4
0.827
1.000
KLF4
M04464_2.00
Homo sapiens
NVCCMCRCCCN
NGGGYGKGGBN
SELEX
Yin et al.(2017)
KLF4_eDBD_Methyl-HT-SELEX
0.827
1.000
KLF2
M04455_2.00
Homo sapiens
NVCCMCRCCCH
DGGGYGKGGBN
SELEX
Yin et al.(2017)
KLF2_eDBD_HT-SELEX
0.813
0.942
KLF2
M10210_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$LKLF_Q3
0.813
0.942
KLF2
M10211_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$LKLF_Q6
0.813
0.942
KLF2
M04456_2.00
Homo sapiens
NVCCMCRCCCN
NGGGYGKGGBN
SELEX
Yin et al.(2017)
KLF2_eDBD_Methyl-HT-SELEX
0.813
0.942
KLF1
M00226_2.00
Homo sapiens
CMCGCCCM
KGGGCGKG
PBM
Barrera et al.(2016)
KLF1_REF
0.784
0.884
KLF1
M08293_2.00
Homo sapiens
NVNNNRCCMCRCCCH
DGGGYGKGGYNNNBN
ChIP-seq
Schmitges et al.(2016)
Q13351.MEME
0.784
0.884
KLF1
M08871_2.00
Homo sapiens
SVNDGCCMCRCCCH
DGGGYGKGGCHNBS
Misc
Kulakovskiy et al.(2013)
KLF1_HUMAN.H11MO.0.A
0.784
0.884
KLF1
M10163_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$EKLF_Q5_01
0.784
0.884
KLF1
M10164_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$EKLF_Q5
0.784
0.884
KLF1
M00224_2.00
Homo sapiens
YMCGCCCH
DGGGCGKR
PBM
Barrera et al.(2016)
KLF1_H299Y
0.784
0.870
KLF5
M04410_2.00
Homo sapiens
NMCACRCCCH
DGGGYGTGKN
SELEX
Yin et al.(2017)
KLF5_eDBD_HT-SELEX
0.784
0.841
KLF5
M08086_2.00
Homo sapiens
BCCMCDCCCH
DGGGHGKGGV
ChIP-seq
Mathelier et al.(2014)
MA0599.1
0.784
0.841
KLF5
M08868_2.00
Homo sapiens
NHVNRCCMCDCCCH
DGGGHGKGGYNBDN
Misc
Kulakovskiy et al.(2013)
KLF5_HUMAN.H11MO.0.A
0.784
0.841
Klf5
M08965_2.00
Mus musculus
KCCMCDCCCHBBBCH
DGVVVDGGGHGKGGM
Misc
Kulakovskiy et al.(2013)
KLF5_MOUSE.H11MO.0.A
0.784
0.841
KLF5
M09502_2.00
Homo sapiens
GCCMCRCCCH
DGGGYGKGGC
Misc
Heinz et al.(2010)
LoVo-KLF5_GSE49402
0.784
0.841
KLF5
M10149_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$BTEB2_Q3_01
0.784
0.841
KLF5
M10150_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$BTEB2_Q3
0.784
0.841
KLF5
M04411_2.00
Homo sapiens
NMCACRCCYH
DRGGYGTGKN
SELEX
Yin et al.(2017)
KLF5_eDBD_Methyl-HT-SELEX
0.784
0.841
KLF3
M04418_2.00
Homo sapiens
RRCCRCGCCCH
DGGGCGYGGYY
SELEX
Yin et al.(2017)
KLF3_FL_HT-SELEX
0.784
0.826
KLF3
M08876_2.00
Homo sapiens
NSNNVCCMCRCCCHBBBBN
NVVVVDGGGYGKGGBNNSN
Misc
Kulakovskiy et al.(2013)
KLF3_HUMAN.H11MO.0.B
0.784
0.826
Klf3
M08982_2.00
Mus musculus
NSNNVCCMCRCCCHBBBBN
NVVVVDGGGYGKGGBNNSN
Misc
Kulakovskiy et al.(2013)
KLF3_MOUSE.H11MO.0.A
0.784
0.826
KLF3
M10172_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$KLF3_Q3_01
0.784
0.826
KLF3
M10173_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$KLF3_Q3
0.784
0.826
KLF3
M04419_2.00
Homo sapiens
DRCCACGCCCH
DGGGCGTGGYH
SELEX
Yin et al.(2017)
KLF3_FL_Methyl-HT-SELEX_1
0.784
0.826
KLF3
M04420_2.00
Homo sapiens
RRSCGCARCCCN
NGGGYTGCGSYY
SELEX
Yin et al.(2017)
KLF3_FL_Methyl-HT-SELEX_2
0.784
0.826
Klf1
M08099_2.00
Mus musculus
NRCCACACCCW
WGGGTGTGGYN
ChIP-seq
Mathelier et al.(2014)
MA0493.1
0.781
0.855
Klf1
M09008_2.00
Mus musculus
MVMNSCCMCRCCCH
DGGGYGKGGSNKBK
Misc
Kulakovskiy et al.(2013)
KLF1_MOUSE.H11MO.0.A
0.781
0.855
Klf1
M09516_2.00
Mus musculus
DRCCACACCCWN
NWGGGTGTGGYH
Misc
Heinz et al.(2010)
Erythrocyte-Klf1_GSE20478
0.781
0.855
Klf7
M00134_2.00
Mus musculus
NHHMCRCCCH
DGGGYGKDDN
PBM
Badis et al.(2009)
Klf7_0974
0.765
0.812
luna
M03704_2.00
Drosophila melanogaster
RCCACRCCCH
DGGGYGTGGY
SELEX
Nitta et al.(2015)
luna_1
0.765
0.812
luna
M06163_2.00
Drosophila melanogaster
RRMHMCRCCC
GGGYGKDKYY
B1H
Zhu et al.(2011)
luna_SANGER_5_FBgn0040765
0.765
0.812
luna
M06164_2.00
Drosophila melanogaster
DRCCMCGCCCHNNN
NNNDGGGCGKGGYH
B1H
Zhu et al.(2011)
luna_SOLEXA_5_FBgn0040765
0.765
0.812
KLF7
M08298_2.00
Homo sapiens
VVCHMCGCCCH
DGGGCGKDGBB
ChIP-seq
Schmitges et al.(2016)
O75840.MEME
0.765
0.812
KLF6
M04400_2.00
Homo sapiens
NVMCACRCCCH
DGGGYGTGKBN
SELEX
Yin et al.(2017)
KLF6_eDBD_HT-SELEX
0.765
0.797
KLF6
M08857_2.00
Homo sapiens
BYBYVNBCYMCDCCCYBBN
NVVRGGGHGKRGVNBRVRV
Misc
Kulakovskiy et al.(2013)
KLF6_HUMAN.H11MO.0.A
0.765
0.797
Klf6
M08962_2.00
Mus musculus
BYBYVNBCYMCDCCCYBBN
NVVRGGGHGKRGVNBRVRV
Misc
Kulakovskiy et al.(2013)
KLF6_MOUSE.H11MO.0.B
0.765
0.797
KLF6
M10113_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CPBP_Q6
0.765
0.797
KLF6
M04401_2.00
Homo sapiens
NRCCACGCCCH
DGGGCGTGGYN
SELEX
Yin et al.(2017)
KLF6_eDBD_Methyl-HT-SELEX
0.765
0.797
Klf12
M00787_2.00
Mus musculus
NNHMCRCCCH
DGGGYGKDNN
PBM
Weirauch et al.(2013)
pTH0977
0.762
0.812
Klf12
M02937_2.00
Mus musculus
GRCCACGCCCWHHHN
NDDDWGGGCGTGGYC
SELEX
Jolma et al.(2013)
Klf12_1
0.762
0.812
KLF12
M04430_2.00
Homo sapiens
DRCCACGCCCH
DGGGCGTGGYH
SELEX
Yin et al.(2017)
KLF12_FL_HT-SELEX
0.762
0.812
KLF12
M08299_2.00
Homo sapiens
SBNVGCCMCGCCCHB
VDGGGCGKGGCBNVS
ChIP-seq
Schmitges et al.(2016)
Q9Y4X4.MEME
0.762
0.812
KLF12
M08879_2.00
Homo sapiens
GCCCCGCCCYB
VRGGGCGGGGC
Misc
Kulakovskiy et al.(2013)
KLF12_HUMAN.H11MO.0.C
0.762
0.812
KLF12
M10186_2.00
Homo sapiens
HMYACDG
CHGTRKD
Transfac
Matys et al.(2006)
V$AP2REP_01
0.762
0.812
KLF12
M04431_2.00
Homo sapiens
RGSCGACGCCCN
NGGGCGTCGSCY
SELEX
Yin et al.(2017)
KLF12_FL_Methyl-HT-SELEX_1
0.762
0.812
KLF12
M04432_2.00
Homo sapiens
NRCCACGCCCH
DGGGCGTGGYN
SELEX
Yin et al.(2017)
KLF12_FL_Methyl-HT-SELEX_2
0.762
0.812
dar1
M06171_2.00
Drosophila melanogaster
RMCACACCCWH
DWGGGTGTGKY
B1H
Zhu et al.(2011)
CG12029_SANGER_10_FBgn0035454
0.758
0.768
dar1
M06172_2.00
Drosophila melanogaster
NNNRCCACRCCCHNN
NNDGGGYGTGGYNNN
B1H
Zhu et al.(2011)
CG12029_SOLEXA_5_FBgn0035454
0.758
0.768
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSOGAP00000021472
C2H2 ZF
404
428
HTCDYAGCGKTYTKSSHLKAHLRTH
ENSOGAP00000021472
C2H2 ZF
434
458
YHCDWDGCGWKFARSDELTRHYRKH
ENSOGAP00000021472
C2H2 ZF
464
486
FQCQKCDRAFSRSDHLALHMKRH
Links
Other
C2H2 ZF
family TFs
Other
Otolemur garnettii
TFs
668 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ANCCEY_07914
Ancylostoma ceylanicum
ANCCEY_07914
I
CBG09320
Caenorhabditis briggsae
CBG09320
I
CBN21486
Caenorhabditis brenneri
CBN21486
I
CBN28290
Caenorhabditis brenneri
CBN28290
I
CJA28065
Caenorhabditis japonica
CJA28065
I
CRE31070
Caenorhabditis remanei
CRE31070
I
HCOI01190000
Haemonchus contortus
HCOI01190000
I
HPBE_0001646201
Heligmosomoides bakeri
HPBE_0001646201
I
HPLM_0000974301
Haemonchus placei
HPLM_0000974301
I
HPLM_0000974401
Haemonchus placei
HPLM_0000974401
I
L596_g14532
Steinernema carpocapsae
L596_g14532
I
L596_g14533
Steinernema carpocapsae
L596_g14533
I
L596_g14536
Steinernema carpocapsae
L596_g14536
I
L596_g14537
Steinernema carpocapsae
L596_g14537
I
L596_g14541
Steinernema carpocapsae
L596_g14541
N
L596_g14578
Steinernema carpocapsae
L596_g14578
N
L596_g14588
Steinernema carpocapsae
L596_g14588
I
L596_g14589
Steinernema carpocapsae
L596_g14589
I
L596_g14590
Steinernema carpocapsae
L596_g14590
I
L596_g14596
Steinernema carpocapsae
L596_g14596
I
L889_g6692
Steinernema feltiae
L889_g6692
I
L889_g6694
Steinernema feltiae
L889_g6694
I
L889_g6695
Steinernema feltiae
L889_g6695
I
L889_g6696
Steinernema feltiae
L889_g6696
I
L889_g6792
Steinernema feltiae
L889_g6792
I
L889_g6798
Steinernema feltiae
L889_g6798
I
L889_g6799
Steinernema feltiae
L889_g6799
I
L889_g6803
Steinernema feltiae
L889_g6803
N
L889_g6804
Steinernema feltiae
L889_g6804
I
L889_g6806
Steinernema feltiae
L889_g6806
N
L889_g8185
Steinernema feltiae
L889_g8185
I
L889_g8187
Steinernema feltiae
L889_g8187
I
L892_g10840
Steinernema scapterisci
L892_g10840
N
L892_g10842
Steinernema scapterisci
L892_g10842
I
L892_g10843
Steinernema scapterisci
L892_g10843
I
L892_g14817
Steinernema scapterisci
L892_g14817
I
L892_g14818
Steinernema scapterisci
L892_g14818
I
L892_g2780
Steinernema scapterisci
L892_g2780
I
L892_g2781
Steinernema scapterisci
L892_g2781
I
L892_g2782
Steinernema scapterisci
L892_g2782
I
L893_g18992
Steinernema glaseri
L893_g18992
I
L893_g18993
Steinernema glaseri
L893_g18993
I
L893_g27935
Steinernema glaseri
L893_g27935
N
L893_g27943
Steinernema glaseri
L893_g27943
N
L898_g12799
Steinernema monticolum
L898_g12799
I
L898_g19012
Steinernema monticolum
L898_g19012
I
L898_g19014
Steinernema monticolum
L898_g19014
I
L898_g19019
Steinernema monticolum
L898_g19019
I
L898_g21763
Steinernema monticolum
L898_g21763
I
L898_g2943
Steinernema monticolum
L898_g2943
N
L898_g2944
Steinernema monticolum
L898_g2944
N
L898_g3512
Steinernema monticolum
L898_g3512
I
L898_g3514
Steinernema monticolum
L898_g3514
I
L898_g3515
Steinernema monticolum
L898_g3515
I
L898_g4012
Steinernema monticolum
L898_g4012
I
L898_g4015
Steinernema monticolum
L898_g4015
N
L898_g4016
Steinernema monticolum
L898_g4016
N
L898_g4018
Steinernema monticolum
L898_g4018
N
NBR_0001834701
Nippostrongylus brasiliensis
NBR_0001834701
I
NBR_0001834801
Nippostrongylus brasiliensis
NBR_0001834801
I
scaffold31-EXSNAP2012.20
Pristionchus exspectatus
scaffold31-EXSNAP2012.20
I
nhr-142
Caenorhabditis elegans
WBGene00018430
D