ONIVA03G40710 (Oryza nivara)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ONIVA03G40710 T124953_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT5G04390
M01857_2.00 		Arabidopsis thaliana
NNHRSWN
NWSYDNN		 PBM
Weirauch et al.(2014)
pTH7158 		0.784 0.761
AT5G04390
M06819_2.00 		Arabidopsis thaliana
HHHHWHCACTN
NAGTGDWDDDD		 Dap-seq
OMalley et al.(2016)
At5g04390_col200_a 		0.784 0.761
AT5G03510
M00860_2.00 		Arabidopsis thaliana
NNHRSWN
NWSYDNN		 PBM
Franco-Zorrilla et al.(2014)
ZAT14 		0.783 0.696
ZAT7
M01855_2.00 		Arabidopsis thaliana
NVDBRCACTNNNN
NNNNAGTGYVHBN		 PBM
Weirauch et al.(2014)
pTH7540 		0.761 0.739
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ONIVA03G40710.1 C2H2 ZF 55 77
ONIVA03G40710.1 C2H2 ZF 109 131

Links

Other C2H2 ZF family TFs
Other Oryza nivara TFs

364 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30068.m002615 Ricinus communis 30068.m002615 I
30076.m004471 Ricinus communis 30076.m004471 I
AMTR_s00114p00142630 Amborella trichopoda AMTR_s00114p00142630 I
Aquca_037_00291 Aquilegia coerulea Aquca_037_00291 I
Aquca_072_00063 Aquilegia coerulea Aquca_072_00063 I
NGA3 Arabidopsis thaliana AT1G01030 N
NGA1 Arabidopsis thaliana AT2G46870 N
NGA2 Arabidopsis thaliana AT3G61970 N
BGIOSGA011738 Oryza indica BGIOSGA011738 N
BGIOSGA014498 Oryza indica BGIOSGA014498 I
Bo3g001110 Brassica oleracea Bo3g001110 N
Bo3g039420 Brassica oleracea Bo3g039420 N
Bo4g006900 Brassica oleracea Bo4g006900 N
Bo4g099000 Brassica oleracea Bo4g099000 N
Bo4g197410 Brassica oleracea Bo4g197410 I
Bo5g002790 Brassica oleracea Bo5g002790 N
Bo5g136360 Brassica oleracea Bo5g136360 N
Bo6g079210 Brassica oleracea Bo6g079210 N
Bo8g097490 Brassica oleracea Bo8g097490 N
Bostr.13158s0202 Boechera stricta Bostr.13158s0202 N
Bostr.25993s0080 Boechera stricta Bostr.25993s0080 N
Bostr.5325s0023 Boechera stricta Bostr.5325s0023 N
Bra000434 Brassica rapa Bra000434 N
Bra003482 Brassica rapa Bra003482 N
Bra004501 Brassica rapa Bra004501 N
Bra007646 Brassica rapa Bra007646 N
Bra014415 Brassica rapa Bra014415 N
Bra030497 Brassica rapa Bra030497 N
Bra033294 Brassica rapa Bra033294 N
Bra034828 Brassica rapa Bra034828 N
Bra040478 Brassica rapa Bra040478 I
BRADI5G19260 Brachypodium distachyon BRADI5G19260 I
Cagra.0050s0013 Capsella grandiflora Cagra.0050s0013 N
Cagra.0483s0046 Capsella grandiflora Cagra.0483s0046 I
Cagra.11546s0001 Capsella grandiflora Cagra.11546s0001 I
Cagra.1968s0048 Capsella grandiflora Cagra.1968s0048 N
Carubv10009540m.g Capsella rubella Carubv10009540m.g N
Carubv10010429m.g Capsella rubella Carubv10010429m.g I
Carubv10017696m.g Capsella rubella Carubv10017696m.g I
Carubv10023656m.g Capsella rubella Carubv10023656m.g N
cassava29779.valid.m1 Manihot esculenta cassava29779.valid.m1 I
cassava36125.valid.m1 Manihot esculenta cassava36125.valid.m1 I
cassava39049.m1 Manihot esculenta cassava39049.m1 I
Ca_01368 Cicer arietinum Ca_01368 I
chr1.CM0105.800.nc Lotus japonicus chr1.CM0105.800.nc I
Ciclev10020034m.g Citrus clementina Ciclev10020034m.g I
Ciclev10020450m.g Citrus clementina Ciclev10020450m.g I
Cla005055 Citrullus lanatus Cla005055 N
Cla006845 Citrullus lanatus Cla006845 I
Cla014858 Citrullus lanatus Cla014858 N
Cucsa.106780 Cucumis sativus Cucsa.106780 N
Cucsa.193290 Cucumis sativus Cucsa.193290 I
Cucsa.349830 Cucumis sativus Cucsa.349830 N
Eucgr.B03050 Eucalyptus grandis Eucgr.B03050 I
Eucgr.E01093 Eucalyptus grandis Eucgr.E01093 I
Eucgr.G02345 Eucalyptus grandis Eucgr.G02345 I
Eucgr.L00348 Eucalyptus grandis Eucgr.L00348 I
evm.TU.supercontig_37.108 Carica papaya evm.TU.supercontig_37.108 I
evm.TU.supercontig_57.71 Carica papaya evm.TU.supercontig_57.71 I
F775_20738 Aegilops tauschii F775_20738 I
F775_21292 Aegilops tauschii F775_21292 I
F775_21293 Aegilops tauschii F775_21293 I
F775_22332 Aegilops tauschii F775_22332 I
fgenesh2_kg.181__3__AT2G46870.1 Arabidopsis lyrata fgenesh2_kg.181__3__AT2G46870.1 N
NGA3 Arabidopsis lyrata fgenesh2_kg.1__134__AT1G01030.1 N
fgenesh2_kg.4__2914__AT2G46870.1 Arabidopsis lyrata fgenesh2_kg.4__2914__AT2G46870.1 N
NGA2 Arabidopsis lyrata fgenesh2_kg.5__2696__AT3G61970.1 N
gene01855-v1.0-hybrid Fragaria vesca gene01855-v1.0-hybrid I
gene18594-v1.0-hybrid Fragaria vesca gene18594-v1.0-hybrid I
GLYMA03G42301 Glycine max GLYMA03G42301 I
GLYMA07G05381 Glycine max GLYMA07G05381 I
GLYMA16G01951 Glycine max GLYMA16G01951 I
GLYMA19G45090 Glycine max GLYMA19G45090 I
Gorai.001G150200 Gossypium raimondii Gorai.001G150200 I
Gorai.003G073600 Gossypium raimondii Gorai.003G073600 I
Gorai.004G128200 Gossypium raimondii Gorai.004G128200 N
Gorai.007G114200 Gossypium raimondii Gorai.007G114200 I
Gorai.008G132400 Gossypium raimondii Gorai.008G132400 I
Gorai.008G261100 Gossypium raimondii Gorai.008G261100 I
GRMZM2G018336 Zea mays GRMZM2G018336 I
GRMZM2G065538 Zea mays GRMZM2G065538 I
GRMZM2G082227 Zea mays GRMZM2G082227 N
GRMZM2G102059 Zea mays GRMZM2G102059 N
GSMUA_Achr1G03600_001 Musa acuminata GSMUA_Achr1G03600_001 I
GSMUA_Achr4G26430_001 Musa acuminata GSMUA_Achr4G26430_001 I
LjSGA_031920.1 Lotus japonicus LjSGA_031920.1 I
LjT15D16.50.nc Lotus japonicus LjT15D16.50.nc I
LPERR02G22870 Leersia perrieri LPERR02G22870 I
LPERR03G01560 Leersia perrieri LPERR03G01560 N
LPERR04G18630 Leersia perrieri LPERR04G18630 N
Lus10021326.g Linum usitatissimum Lus10021326.g N
Lus10034276.g Linum usitatissimum Lus10034276.g I
MDP0000128295 Malus domestica MDP0000128295 N
MDP0000138163 Malus domestica MDP0000138163 N
mgf019085m Mimulus guttatus mgf019085m N
MLOC_38822 Hordeum vulgare MLOC_38822 I
MLOC_44012 Hordeum vulgare MLOC_44012 I
MLOC_48938 Hordeum vulgare MLOC_48938 N
MLOC_66387 Hordeum vulgare MLOC_66387 I
MTR_7g117455 Medicago truncatula MTR_7g117455 I
MTR_8g023990 Medicago truncatula MTR_8g023990 I
OB01G12610 Oryza brachyantha OB01G12610 I
OB01G36520 Oryza brachyantha OB01G36520 I
OB02G35380 Oryza brachyantha OB02G35380 I
OB03G11610 Oryza brachyantha OB03G11610 N
OB05G32250 Oryza brachyantha OB05G32250 I
OB10G24100 Oryza brachyantha OB10G24100 N
OBART01G02620 Oryza barthii OBART01G02620 I
OBART03G01650 Oryza barthii OBART03G01650 N
OBART04G22880 Oryza barthii OBART04G22880 I
OGLUM01G02860 Oryza glumaepatula OGLUM01G02860 I
OGLUM03G01630 Oryza glumaepatula OGLUM03G01630 N
OGLUM04G22780 Oryza glumaepatula OGLUM04G22780 I
OLONG_000415 Oryza longistaminata OLONG_000415 I
OLONG_010584 Oryza longistaminata OLONG_010584 I
OMERI03G01600 Oryza meridionalis OMERI03G01600 N
ONIVA02G30750 Oryza nivara ONIVA02G30750 N
ONIVA04G22030 Oryza nivara ONIVA04G22030 I
OPUNC03G01540 Oryza punctata OPUNC03G01540 N
OPUNC04G20430 Oryza punctata OPUNC04G20430 I
orange1.1g013565m.g Citrus sinensis orange1.1g013565m.g I
orange1.1g015743m.g Citrus sinensis orange1.1g015743m.g I
ORGLA03G0014300 Oryza glaberrima ORGLA03G0014300 N
ORGLA04G0198400 Oryza glaberrima ORGLA04G0198400 I
OS03G0120900 Oryza sativa OS03G0120900 N
OS04G0581400 Oryza sativa OS04G0581400 I
Pavir.Ab02711 Panicum virgatum Pavir.Ab02711 I
Pavir.Ea00485 Panicum virgatum Pavir.Ea00485 I
Pavir.Ga00960 Panicum virgatum Pavir.Ga00960 N
Pavir.J38226 Panicum virgatum Pavir.J38226 N
PGSC0003DMG400005856 Solanum tuberosum PGSC0003DMG400005856 I
PGSC0003DMG400005857 Solanum tuberosum PGSC0003DMG400005857 I
PGSC0003DMG400008936 Solanum tuberosum PGSC0003DMG400008936 N
PGSC0003DMG400012222 Solanum tuberosum PGSC0003DMG400012222 I
PK11025.1 Cannabis sativa PK11025.1 I
PK21157.1 Cannabis sativa PK21157.1 I
Pm024248 Prunus mume Pm024248 I
Pm028725 Prunus mume Pm028725 N
POPTR_0001s45650 Populus trichocarpa POPTR_0001s45650 I
POPTR_0002s18260 Populus trichocarpa POPTR_0002s18260 N
POPTR_0011s15270 Populus trichocarpa POPTR_0011s15270 I
POPTR_0014s10290 Populus trichocarpa POPTR_0014s10290 I
PRUPE_ppa015999mg Prunus persica PRUPE_ppa015999mg N
PRUPE_ppa019131mg Prunus persica PRUPE_ppa019131mg I
SapurV1A.0003s0340 Salix purpurea SapurV1A.0003s0340 I
SapurV1A.0162s0420 Salix purpurea SapurV1A.0162s0420 I
SapurV1A.0285s0040 Salix purpurea SapurV1A.0285s0040 I
SapurV1A.0666s0090 Salix purpurea SapurV1A.0666s0090 I
Sb01g030520 Sorghum bicolor Sb01g030520 N
Sb06g026370 Sorghum bicolor Sb06g026370 N
SELMODRAFT_59317 Selaginella moellendorffii SELMODRAFT_59317 N
Si011823m.g Setaria italica Si011823m.g N
Solyc08g013690.1 Solanum lycopersicum Solyc08g013690.1 I
Solyc08g013700.1 Solanum lycopersicum Solyc08g013700.1 I
Solyc08g083400.2 Solanum lycopersicum Solyc08g083400.2 I
Solyc09g010230.1 Solanum lycopersicum Solyc09g010230.1 N
TCM_005014 Theobroma cacao TCM_005014 I
TCM_015590 Theobroma cacao TCM_015590 I
TCM_022729 Theobroma cacao TCM_022729 N
Thhalv10001555m.g Eutrema salsugineum Thhalv10001555m.g N
Thhalv10006123m.g Eutrema salsugineum Thhalv10006123m.g I
Thhalv10008068m.g Eutrema salsugineum Thhalv10008068m.g N
Thhalv10015675m.g Eutrema salsugineum Thhalv10015675m.g I
Traes_1AL_29F610E15 Triticum aestivum Traes_1AL_29F610E15 N
Traes_1BL_53C31B54B Triticum aestivum Traes_1BL_53C31B54B I
Traes_1BL_60A56C455 Triticum aestivum Traes_1BL_60A56C455 I
Traes_1BL_B8B4C1FB6 Triticum aestivum Traes_1BL_B8B4C1FB6 I
Traes_1BL_F14523046 Triticum aestivum Traes_1BL_F14523046 I
Traes_2AL_41E2E66D9 Triticum aestivum Traes_2AL_41E2E66D9 I
Traes_2BL_439C794F5 Triticum aestivum Traes_2BL_439C794F5 N
Traes_2DL_896E50180 Triticum aestivum Traes_2DL_896E50180 I
Traes_3AS_2E5380A2A Triticum aestivum Traes_3AS_2E5380A2A I
Traes_4BL_D9784B20C1 Triticum aestivum Traes_4BL_D9784B20C1 N
Traes_4DL_59B1C9052 Triticum aestivum Traes_4DL_59B1C9052 I
Traes_4DL_872A1302F Triticum aestivum Traes_4DL_872A1302F I
Traes_4DL_A83084AC1 Triticum aestivum Traes_4DL_A83084AC1 N
Traes_6AL_44AA5642C Triticum aestivum Traes_6AL_44AA5642C I
Traes_6DL_359607E93 Triticum aestivum Traes_6DL_359607E93 I
TRIUR3_10777 Triticum urartu TRIUR3_10777 N
TRIUR3_10778 Triticum urartu TRIUR3_10778 N
TRIUR3_10779 Triticum urartu TRIUR3_10779 I
TRIUR3_24850 Triticum urartu TRIUR3_24850 I
TRIUR3_24950 Triticum urartu TRIUR3_24950 I
VIT_02s0025g03000 Vitis vinifera VIT_02s0025g03000 I
VIT_15s0048g02370 Vitis vinifera VIT_15s0048g02370 I