AFUN008770 (Anopheles funestus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 AFUN008770 T148928_2.00 Vectorbase (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
klu
M03680_2.00 		Drosophila melanogaster
HCCRCCCACGCAH
DTGCGTGGGYGGD		 SELEX
Nitta et al.(2015)
klu_1 		0.771 0.902
klu
M03681_2.00 		Drosophila melanogaster
YMCGCCCMCGCAH
DTGCGKGGGCGKR		 SELEX
Nitta et al.(2015)
klu_2 		0.771 0.902
klu
M06114_2.00 		Drosophila melanogaster
MCACCCMCRCA
TGYGKGGGTGK		 B1H
Zhu et al.(2011)
klu_SANGER_10_FBgn0013469 		0.771 0.902
klu
M06115_2.00 		Drosophila melanogaster
NNNNMCACCCMCRCN
NGYGKGGGTGKNNNN		 B1H
Zhu et al.(2011)
klu_SOLEXA_5_FBgn0013469 		0.771 0.902
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AFUN008770-PA C2H2 ZF 407 430
AFUN008770-PA C2H2 ZF 443 465
AFUN008770-PA C2H2 ZF 471 493
AFUN008770-PA C2H2 ZF 499 521

Links

Other C2H2 ZF family TFs
Other Anopheles funestus TFs

52 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30106.m000672 Ricinus communis 30106.m000672 I
FAR1 Arabidopsis thaliana AT4G15090 D
Bo6g054750 Brassica oleracea Bo6g054750 I
Bostr.0597s0142 Boechera stricta Bostr.0597s0142 I
Bra040696 Brassica rapa Bra040696 I
Cagra.1850s0019 Capsella grandiflora Cagra.1850s0019 I
Carubv10012703m.g Capsella rubella Carubv10012703m.g I
cassava24584.valid.m1 Manihot esculenta cassava24584.valid.m1 I
Cucsa.180080 Cucumis sativus Cucsa.180080 I
Cucsa.180090 Cucumis sativus Cucsa.180090 I
Eucgr.C04090 Eucalyptus grandis Eucgr.C04090 I
gene24215-v1.0-hybrid Fragaria vesca gene24215-v1.0-hybrid I
GLYMA04G14850 Glycine max GLYMA04G14850 I
GLYMA06G47210 Glycine max GLYMA06G47210 I
GLYMA10G40510 Glycine max GLYMA10G40510 I
GLYMA20G26810 Glycine max GLYMA20G26810 I
Gorai.007G173400 Gossypium raimondii Gorai.007G173400 I
mgf008053m Mimulus guttatus mgf008053m I
PK04639.1 Cannabis sativa PK04639.1 I
Pm014858 Prunus mume Pm014858 I
POPTR_0006s02140 Populus trichocarpa POPTR_0006s02140 I
PRUPE_ppa001511mg Prunus persica PRUPE_ppa001511mg I
SapurV1A.0767s0090 Salix purpurea SapurV1A.0767s0090 I
SapurV1A.0767s0100 Salix purpurea SapurV1A.0767s0100 I
Solyc07g043270.2 Solanum lycopersicum Solyc07g043270.2 I
Solyc08g060840.1 Solanum lycopersicum Solyc08g060840.1 I
TCM_002030 Theobroma cacao TCM_002030 I
TCM_013043 Theobroma cacao TCM_013043 I
Thhalv10024410m.g Eutrema salsugineum Thhalv10024410m.g I
FAR1 Vitis vinifera VIT_03s0017g01810 I