CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

Nfya *(Rattus norvegicus)* CBF/NF-Y
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF02045 (CBFB_NFYA)	IPR001289	ENSRNOG00000012702	T159948_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
NFYA M08104_2.00	Homo sapiens	NSTGATTGGYB	VRCCAATCASN	ChIP-seq Mathelier et al.(2014) MA0060.3	1.000	1.000
NFYA M09018_2.00	Homo sapiens	YKBYSATTGGYYRV	BYRRCCAATSRVMR	Misc Kulakovskiy et al.(2013) NFYA_HUMAN.H11MO.0.A	1.000	1.000
Nfya M09019_2.00	Mus musculus	YKBYSATTGGYYRV	BYRRCCAATSRVMR	Misc Kulakovskiy et al.(2013) NFYA_MOUSE.H11MO.0.A	1.000	1.000
NFYA M10403_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$NFYA_02	1.000	1.000
NFYA M10404_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$NFYA_Q5	1.000	1.000
NFYA M10405_2.00	Homo sapiens	NYTGATTGGYTAVH	DBTARCCAATCARN	Transfac Matys et al.(2006) V$NFY_C	1.000	1.000
HAP2 M08452_2.00	Saccharomyces cerevisiae	TTGGH	DCCAA	COMPILED Mathelier et al.(2014) MA0313.1	0.732	0.732
For this family, TFs with SR scores > 0.700* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
ENSRNOP00000017157	CBF/NF-Y	257	312	EPLYVNAKQYHRILKRRQARAKLEAEGKIPKERRKYLHESRHRHAMARKRGEGGRF
ENSRNOP00000075707	CBF/NF-Y	263	318	EPLYVNAKQYHRILKRRQARAKLEAEGKIPKERRKYLHESRHRHAMARKRGEGGRF

Links
Other CBF/NF-Y family TFs
Other *Rattus norvegicus* TFs