mgf008053m (Mimulus guttatus)
FAR1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03101 (FAR1) IPR004330 mgf008053m T181143_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
FAR1
M06880_2.00 		Arabidopsis thaliana
NNYHCACGCGCYDNH
DNHRGCGCGTGDRNN		 Dap-seq
OMalley et al.(2016)
FAR1_col_a 		0.875 0.875
FAR1
M06881_2.00 		Arabidopsis thaliana
NNNNBDNDNNYHCACGCGCYD
HRGCGCGTGDRNNHNHVNNNN		 Dap-seq
OMalley et al.(2016)
FAR1_colamp_a 		0.875 0.875
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
mgf008053m FAR1 65 152

Links

Other FAR1 family TFs
Other Mimulus guttatus TFs

37 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30106.m000672 Ricinus communis 30106.m000672 I 0.875
FAR1 Arabidopsis thaliana AT4G15090 D 0.875
Bo6g054750 Brassica oleracea Bo6g054750 I 0.833
Bostr.0597s0142 Boechera stricta Bostr.0597s0142 I 0.864
Bra040696 Brassica rapa Bra040696 I 0.833
Cagra.1850s0019 Capsella grandiflora Cagra.1850s0019 I 0.886
Carubv10004178m.g Capsella rubella Carubv10004178m.g I 0.886
Carubv10012703m.g Capsella rubella Carubv10012703m.g I 0.886
cassava24584.valid.m1 Manihot esculenta cassava24584.valid.m1 I 0.852
Cucsa.180080 Cucumis sativus Cucsa.180080 I 0.705
Cucsa.180090 Cucumis sativus Cucsa.180090 I 0.875
Eucgr.A00908 Eucalyptus grandis Eucgr.A00908 I 0.716
Eucgr.C04090 Eucalyptus grandis Eucgr.C04090 I 0.909
evm.TU.supercontig_8.288 Carica papaya evm.TU.supercontig_8.288 I 0.716
gene24215-v1.0-hybrid Fragaria vesca gene24215-v1.0-hybrid I 0.898
GLYMA04G14850 Glycine max GLYMA04G14850 I 0.705
GLYMA06G47210 Glycine max GLYMA06G47210 I 0.705
GLYMA10G40510 Glycine max GLYMA10G40510 I 0.909
GLYMA20G26810 Glycine max GLYMA20G26810 I 0.898
Gorai.005G134200 Gossypium raimondii Gorai.005G134200 I 0.705
Gorai.007G173400 Gossypium raimondii Gorai.007G173400 I 0.886
MDP0000286803 Malus domestica MDP0000286803 I 0.705
PK04639.1 Cannabis sativa PK04639.1 I 0.886
PK08903.1 Cannabis sativa PK08903.1 I 0.716
Pm014858 Prunus mume Pm014858 I 0.898
Pm014859 Prunus mume Pm014859 I 0.705
POPTR_0006s02140 Populus trichocarpa POPTR_0006s02140 I 0.898
POPTR_0006s02150 Populus trichocarpa POPTR_0006s02150 I 0.705
PRUPE_ppa001344mg Prunus persica PRUPE_ppa001344mg I 0.705
PRUPE_ppa001511mg Prunus persica PRUPE_ppa001511mg I 0.898
SapurV1A.0767s0090 Salix purpurea SapurV1A.0767s0090 I 0.898
SapurV1A.0767s0100 Salix purpurea SapurV1A.0767s0100 I 0.705
Solyc08g060840.1 Solanum lycopersicum Solyc08g060840.1 I 0.864
TCM_002030 Theobroma cacao TCM_002030 I 0.875
Thhalv10024410m.g Eutrema salsugineum Thhalv10024410m.g I 0.886
FHY3 Vitis vinifera VIT_03s0017g01780 I 0.705
FAR1 Vitis vinifera VIT_03s0017g01810 I 0.898