Gorai.002G096300 (Gossypium raimondii)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03514 (GRAS) IPR005202 Gorai.002G096300 T202605_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.002G096300.1 GRAS 167 537
Gorai.002G096300.2 GRAS 103 473

Links

Other GRAS family TFs
Other Gossypium raimondii TFs

75 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
27613.m000642 Ricinus communis 27613.m000642 N 0.799
AMTR_s00088p00161000 Amborella trichopoda AMTR_s00088p00161000 N 0.710
Aquca_005_00234 Aquilegia coerulea Aquca_005_00234 N 0.759
Aquca_028_00248 Aquilegia coerulea Aquca_028_00248 N 0.737
SCL5 Arabidopsis thaliana AT1G50600 N 0.740
PAT1 Arabidopsis thaliana AT5G48150 N 0.751
Bo2g149670 Brassica oleracea Bo2g149670 N 0.732
Bo6g022330 Brassica oleracea Bo6g022330 N 0.740
Bo7g089080 Brassica oleracea Bo7g089080 N 0.721
Bo9g009260 Brassica oleracea Bo9g009260 N 0.732
Bostr.26675s0117 Boechera stricta Bostr.26675s0117 N 0.740
Bostr.5224s0004 Boechera stricta Bostr.5224s0004 N 0.740
Bra018860 Brassica rapa Bra018860 N 0.740
Bra020715 Brassica rapa Bra020715 N 0.732
Bra036185 Brassica rapa Bra036185 N 0.729
Bra037509 Brassica rapa Bra037509 N 0.702
Cagra.2766s0005 Capsella grandiflora Cagra.2766s0005 N 0.745
Cagra.7055s0004 Capsella grandiflora Cagra.7055s0004 N 0.729
Carubv10008830m.g Capsella rubella Carubv10008830m.g N 0.729
Carubv10026289m.g Capsella rubella Carubv10026289m.g N 0.745
cassava10826.m1 Manihot esculenta cassava10826.m1 N 0.783
cassava34699.m1 Manihot esculenta cassava34699.m1 N 0.791
Ca_09786 Cicer arietinum Ca_09786 N 0.770
Ciclev10007927m.g Citrus clementina Ciclev10007927m.g N 0.797
Ciclev10014845m.g Citrus clementina Ciclev10014845m.g N 0.740
Cla001429 Citrullus lanatus Cla001429 N 0.751
Cla004565 Citrullus lanatus Cla004565 N 0.745
Cucsa.042310 Cucumis sativus Cucsa.042310 N 0.718
Cucsa.120390 Cucumis sativus Cucsa.120390 N 0.745
Eucgr.A01051 Eucalyptus grandis Eucgr.A01051 N 0.743
Eucgr.F03523 Eucalyptus grandis Eucgr.F03523 N 0.748
evm.TU.supercontig_12.194 Carica papaya evm.TU.supercontig_12.194 N 0.786
evm.TU.supercontig_136.17 Carica papaya evm.TU.supercontig_136.17 N 0.772
SCL5 Arabidopsis lyrata fgenesh2_kg.1__4145__AT1G50600.1 N 0.740
gene03551-v1.0-hybrid Fragaria vesca gene03551-v1.0-hybrid N 0.772
gene21592-v1.0-hybrid Fragaria vesca gene21592-v1.0-hybrid N 0.778
GLYMA02G46730 Glycine max GLYMA02G46730 N 0.732
GLYMA02G47640 Glycine max GLYMA02G47640 N 0.770
GLYMA14G01020 Glycine max GLYMA14G01020 N 0.772
GLYMA14G01960 Glycine max GLYMA14G01960 N 0.729
Gorai.001G192800 Gossypium raimondii Gorai.001G192800 N 0.775
Gorai.007G167000 Gossypium raimondii Gorai.007G167000 N 0.778
Gorai.009G446100 Gossypium raimondii Gorai.009G446100 N 0.867
Lus10012323.g Linum usitatissimum Lus10012323.g N 0.715
Lus10016596.g Linum usitatissimum Lus10016596.g N 0.767
MDP0000152670 Malus domestica MDP0000152670 N 0.775
MDP0000205236 Malus domestica MDP0000205236 N 0.794
MDP0000284679 Malus domestica MDP0000284679 N 0.794
MDP0000804652 Malus domestica MDP0000804652 N 0.770
MTR_5g097480 Medicago truncatula MTR_5g097480 N 0.775
orange1.1g009376m.g Citrus sinensis orange1.1g009376m.g N 0.743
Pavir.Ba00562 Panicum virgatum Pavir.Ba00562 N 0.702
PDK_20s1411471g003 Phoenix dactylifera PDK_20s1411471g003 N 0.734
PGSC0003DMG400006132 Solanum tuberosum PGSC0003DMG400006132 N 0.759
PGSC0003DMG400022187 Solanum tuberosum PGSC0003DMG400022187 N 0.721
PK09018.1 Cannabis sativa PK09018.1 N 0.732
PK15082.1 Cannabis sativa PK15082.1 N 0.756
Pm012019 Prunus mume Pm012019 N 0.813
Pm015021 Prunus mume Pm015021 N 0.772
SCL5 Populus trichocarpa POPTR_0001s37270 N 0.767
POPTR_0014s16230 Populus trichocarpa POPTR_0014s16230 N 0.770
PRUPE_ppa003702mg Prunus persica PRUPE_ppa003702mg N 0.775
PRUPE_ppa004136mg Prunus persica PRUPE_ppa004136mg N 0.780
SapurV1A.0030s0420 Salix purpurea SapurV1A.0030s0420 N 0.764
SapurV1A.0054s0160 Salix purpurea SapurV1A.0054s0160 N 0.770
PAT1 Arabidopsis lyrata scaffold_801100.1 N 0.737
Solyc07g047950.1 Solanum lycopersicum Solyc07g047950.1 N 0.759
Solyc07g065270.1 Solanum lycopersicum Solyc07g065270.1 N 0.718
TCM_002319 Theobroma cacao TCM_002319 N 0.778
TCM_030733 Theobroma cacao TCM_030733 N 0.897
Thhalv10004053m.g Eutrema salsugineum Thhalv10004053m.g N 0.715
Thhalv10011379m.g Eutrema salsugineum Thhalv10011379m.g N 0.732
VIT_12s0057g00560 Vitis vinifera VIT_12s0057g00560 N 0.783
SCL5 Vitis vinifera VIT_19s0090g01740 N 0.783