LjSGA_018703.2 (Lotus japonicus)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03514 (GRAS) IPR005202 LjSGA_018703.2 T203297_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
LjSGA_018703.2 GRAS 1 143

Links

Other GRAS family TFs
Other Lotus japonicus TFs

64 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
27613.m000642 Ricinus communis 27613.m000642 N 0.769
Aquca_005_00234 Aquilegia coerulea Aquca_005_00234 N 0.748
Aquca_028_00248 Aquilegia coerulea Aquca_028_00248 N 0.720
SCL5 Arabidopsis thaliana AT1G50600 N 0.762
PAT1 Arabidopsis thaliana AT5G48150 N 0.727
Bo6g022330 Brassica oleracea Bo6g022330 N 0.762
Bo7g089080 Brassica oleracea Bo7g089080 N 0.713
Bo9g009260 Brassica oleracea Bo9g009260 N 0.713
Bostr.26675s0117 Boechera stricta Bostr.26675s0117 N 0.762
Bostr.5224s0004 Boechera stricta Bostr.5224s0004 N 0.734
Bra018860 Brassica rapa Bra018860 N 0.762
Bra020715 Brassica rapa Bra020715 N 0.713
Bra026077 Brassica rapa Bra026077 N 0.755
Bra036185 Brassica rapa Bra036185 N 0.713
Cagra.2766s0005 Capsella grandiflora Cagra.2766s0005 N 0.734
Cagra.7055s0004 Capsella grandiflora Cagra.7055s0004 N 0.755
Carubv10008830m.g Capsella rubella Carubv10008830m.g N 0.755
Carubv10026289m.g Capsella rubella Carubv10026289m.g N 0.734
cassava10826.m1 Manihot esculenta cassava10826.m1 N 0.790
cassava34699.m1 Manihot esculenta cassava34699.m1 N 0.797
Ca_09696 Cicer arietinum Ca_09696 N 0.860
Ca_13855 Cicer arietinum Ca_13855 N 0.811
chr6.LjT11E14.20.nc Lotus japonicus chr6.LjT11E14.20.nc N 0.853
Ciclev10007927m.g Citrus clementina Ciclev10007927m.g N 0.713
Cucsa.120390 Cucumis sativus Cucsa.120390 N 0.727
Eucgr.A01051 Eucalyptus grandis Eucgr.A01051 N 0.748
evm.TU.supercontig_12.194 Carica papaya evm.TU.supercontig_12.194 N 0.706
SCL5 Arabidopsis lyrata fgenesh2_kg.1__4145__AT1G50600.1 N 0.762
gene03551-v1.0-hybrid Fragaria vesca gene03551-v1.0-hybrid N 0.741
gene21592-v1.0-hybrid Fragaria vesca gene21592-v1.0-hybrid N 0.748
GLYMA02G46730 Glycine max GLYMA02G46730 N 0.874
GLYMA02G47640 Glycine max GLYMA02G47640 N 0.720
GLYMA14G01020 Glycine max GLYMA14G01020 N 0.741
GLYMA14G01960 Glycine max GLYMA14G01960 N 0.888
GLYMA18G09030 Glycine max GLYMA18G09030 N 0.811
Gorai.007G167000 Gossypium raimondii Gorai.007G167000 N 0.762
Gorai.009G446100 Gossypium raimondii Gorai.009G446100 N 0.720
Lus10003772.g Linum usitatissimum Lus10003772.g N 0.748
Lus10016596.g Linum usitatissimum Lus10016596.g N 0.741
MDP0000152670 Malus domestica MDP0000152670 N 0.762
MDP0000205236 Malus domestica MDP0000205236 N 0.755
MDP0000284679 Malus domestica MDP0000284679 N 0.755
MDP0000804652 Malus domestica MDP0000804652 N 0.755
MTR_3g056110 Medicago truncatula MTR_3g056110 N 0.825
MTR_5g094450 Medicago truncatula MTR_5g094450 N 0.846
MTR_5g097480 Medicago truncatula MTR_5g097480 N 0.748
orange1.1g009376m.g Citrus sinensis orange1.1g009376m.g N 0.713
PGSC0003DMG400022187 Solanum tuberosum PGSC0003DMG400022187 N 0.727
PK09018.1 Cannabis sativa PK09018.1 N 0.741
Pm012019 Prunus mume Pm012019 N 0.755
Pm015021 Prunus mume Pm015021 N 0.748
SCL5 Populus trichocarpa POPTR_0001s37270 N 0.783
PRUPE_ppa003702mg Prunus persica PRUPE_ppa003702mg N 0.748
PRUPE_ppa004136mg Prunus persica PRUPE_ppa004136mg N 0.762
SapurV1A.0054s0160 Salix purpurea SapurV1A.0054s0160 N 0.741
PAT1 Arabidopsis lyrata scaffold_801100.1 N 0.727
Solyc07g047950.1 Solanum lycopersicum Solyc07g047950.1 N 0.727
Solyc07g065270.1 Solanum lycopersicum Solyc07g065270.1 N 0.734
TCM_030733 Theobroma cacao TCM_030733 N 0.755
Thhalv10002541m.g Eutrema salsugineum Thhalv10002541m.g N 0.706
Thhalv10004053m.g Eutrema salsugineum Thhalv10004053m.g N 0.734
Thhalv10011379m.g Eutrema salsugineum Thhalv10011379m.g N 0.762
VIT_12s0057g00560 Vitis vinifera VIT_12s0057g00560 N 0.727
SCL5 Vitis vinifera VIT_19s0090g01740 N 0.734