PGSC0003DMG400034832 (Solanum tuberosum)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 PGSC0003DMG400034832 T255661_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
PGSC0003DMT400085261 MADS box 16 36

Links

Other MADS box family TFs
Other Solanum tuberosum TFs

49 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Al_scaffold_0002_1221 Arabidopsis lyrata Al_scaffold_0002_1221 N 0.714
AGL62 Arabidopsis thaliana AT5G60440 I 0.714
Bo1g112460 Brassica oleracea Bo1g112460 N 0.714
Bo5g113750 Brassica oleracea Bo5g113750 N 0.714
Bostr.26833s0197 Boechera stricta Bostr.26833s0197 N 0.714
Bostr.7867s1515 Boechera stricta Bostr.7867s1515 N 0.714
Bra022434 Brassica rapa Bra022434 N 0.714
Cagra.2519s0016 Capsella grandiflora Cagra.2519s0016 N 0.714
Carubv10028580m.g Capsella rubella Carubv10028580m.g N 0.714
Ciclev10013802m.g Citrus clementina Ciclev10013802m.g N 0.714
evm.TU.contig_27313 Carica papaya evm.TU.contig_27313 N 0.714
evm.TU.contig_27553.5 Carica papaya evm.TU.contig_27553.5 N 0.714
evm.TU.contig_30005.4 Carica papaya evm.TU.contig_30005.4 N 0.714
evm.TU.contig_34259 Carica papaya evm.TU.contig_34259 N 0.714
evm.TU.contig_35751 Carica papaya evm.TU.contig_35751 N 0.714
evm.TU.contig_37271 Carica papaya evm.TU.contig_37271 N 0.714
evm.TU.contig_38122.1 Carica papaya evm.TU.contig_38122.1 N 0.714
evm.TU.contig_38329 Carica papaya evm.TU.contig_38329 N 0.714
evm.TU.contig_43014 Carica papaya evm.TU.contig_43014 N 0.714
evm.TU.contig_47064.2 Carica papaya evm.TU.contig_47064.2 N 0.714
evm.TU.supercontig_106.18 Carica papaya evm.TU.supercontig_106.18 N 0.714
evm.TU.supercontig_106.19 Carica papaya evm.TU.supercontig_106.19 N 0.714
evm.TU.supercontig_106.20 Carica papaya evm.TU.supercontig_106.20 N 0.762
evm.TU.supercontig_2423.2 Carica papaya evm.TU.supercontig_2423.2 N 0.714
evm.TU.supercontig_347.11 Carica papaya evm.TU.supercontig_347.11 N 0.714
evm.TU.supercontig_347.7 Carica papaya evm.TU.supercontig_347.7 N 0.714
evm.TU.supercontig_348.3 Carica papaya evm.TU.supercontig_348.3 N 0.714
evm.TU.supercontig_348.8 Carica papaya evm.TU.supercontig_348.8 N 0.714
evm.TU.supercontig_348.9 Carica papaya evm.TU.supercontig_348.9 N 0.714
evm.TU.supercontig_439.7 Carica papaya evm.TU.supercontig_439.7 N 0.714
evm.TU.supercontig_505.4 Carica papaya evm.TU.supercontig_505.4 N 0.714
evm.TU.supercontig_505.5 Carica papaya evm.TU.supercontig_505.5 N 0.714
evm.TU.supercontig_625.2 Carica papaya evm.TU.supercontig_625.2 N 0.714
evm.TU.supercontig_654.4 Carica papaya evm.TU.supercontig_654.4 N 0.714
evm.TU.supercontig_654.6 Carica papaya evm.TU.supercontig_654.6 N 0.714
evm.TU.supercontig_758.1 Carica papaya evm.TU.supercontig_758.1 N 0.714
orange1.1g045481m.g Citrus sinensis orange1.1g045481m.g N 0.714
PGSC0003DMG400036006 Solanum tuberosum PGSC0003DMG400036006 N 0.714
PGSC0003DMG400040127 Solanum tuberosum PGSC0003DMG400040127 N 0.810
PGSC0003DMG400040625 Solanum tuberosum PGSC0003DMG400040625 N 0.714
Pm021017 Prunus mume Pm021017 N 0.714
PRUPE_ppa022494mg Prunus persica PRUPE_ppa022494mg N 0.714
Solyc01g060310.1 Solanum lycopersicum Solyc01g060310.1 N 0.714
Solyc01g106730.1 Solanum lycopersicum Solyc01g106730.1 N 0.810
Solyc04g025030.1 Solanum lycopersicum Solyc04g025030.1 N 0.762
Solyc04g025110.1 Solanum lycopersicum Solyc04g025110.1 N 0.762
TCM_006323 Theobroma cacao TCM_006323 N 0.762
Thhalv10022102m.g Eutrema salsugineum Thhalv10022102m.g N 0.714
VIT_01s0010g01530 Vitis vinifera VIT_01s0010g01530 N 0.762