30099.m001672 (Ricinus communis)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 30099.m001672 T257158_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
30099.m001672 MADS box 15 62

Links

Other MADS box family TFs
Other Ricinus communis TFs

300 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Al_scaffold_0001_74 Arabidopsis lyrata Al_scaffold_0001_74 N 0.875
AGL71 Arabidopsis lyrata Al_scaffold_0008_1558 I 0.000
AT4G36590 Arabidopsis thaliana AT4G36590 N 0.854
AGL72 Arabidopsis thaliana AT5G51860 I 0.000
AGL71 Arabidopsis thaliana AT5G51870 I 0.000
Bo9g142570 Brassica oleracea Bo9g142570 N 0.854
Bostr.15774s0334 Boechera stricta Bostr.15774s0334 I 0.000
Bostr.26833s0197 Boechera stricta Bostr.26833s0197 N 0.938
Bostr.7867s1515 Boechera stricta Bostr.7867s1515 N 0.875
Bra002480 Brassica rapa Bra002480 N 0.875
Bra011938 Brassica rapa Bra011938 N 0.729
Bra022434 Brassica rapa Bra022434 N 0.854
Bra038225 Brassica rapa Bra038225 N 0.854
Cagra.2519s0016 Capsella grandiflora Cagra.2519s0016 N 0.938
Carubv10028580m.g Capsella rubella Carubv10028580m.g N 0.938
cassava33542.m1 Manihot esculenta cassava33542.m1 N 0.938
Ca_04659 Cicer arietinum Ca_04659 N 0.875
Ca_04660 Cicer arietinum Ca_04660 N 0.875
Ca_04662 Cicer arietinum Ca_04662 N 0.812
chr3.CM0279.290.nc Lotus japonicus chr3.CM0279.290.nc N 0.854
Ciclev10030142m.g Citrus clementina Ciclev10030142m.g N 0.938
evm.TU.contig_28241.1 Carica papaya evm.TU.contig_28241.1 N 0.917
evm.TU.contig_30005.4 Carica papaya evm.TU.contig_30005.4 N 0.896
evm.TU.contig_35157.2 Carica papaya evm.TU.contig_35157.2 N 0.792
evm.TU.contig_35713 Carica papaya evm.TU.contig_35713 N 0.938
evm.TU.contig_37718 Carica papaya evm.TU.contig_37718 N 0.000
evm.TU.contig_37906 Carica papaya evm.TU.contig_37906 N 0.000
evm.TU.supercontig_106.18 Carica papaya evm.TU.supercontig_106.18 N 0.896
evm.TU.supercontig_106.19 Carica papaya evm.TU.supercontig_106.19 N 0.854
evm.TU.supercontig_1259.1 Carica papaya evm.TU.supercontig_1259.1 N 0.875
evm.TU.supercontig_347.14 Carica papaya evm.TU.supercontig_347.14 N 0.000
evm.TU.supercontig_347.5 Carica papaya evm.TU.supercontig_347.5 N 0.000
evm.TU.supercontig_348.10 Carica papaya evm.TU.supercontig_348.10 N 0.000
evm.TU.supercontig_348.3 Carica papaya evm.TU.supercontig_348.3 N 0.875
evm.TU.supercontig_348.8 Carica papaya evm.TU.supercontig_348.8 N 0.917
evm.TU.supercontig_348.9 Carica papaya evm.TU.supercontig_348.9 N 0.792
evm.TU.supercontig_439.7 Carica papaya evm.TU.supercontig_439.7 N 0.896
evm.TU.supercontig_505.4 Carica papaya evm.TU.supercontig_505.4 N 0.917
evm.TU.supercontig_695.5 Carica papaya evm.TU.supercontig_695.5 N 0.896
evm.TU.supercontig_758.1 Carica papaya evm.TU.supercontig_758.1 N 0.833
evm.TU.supercontig_851.1 Carica papaya evm.TU.supercontig_851.1 N 0.854
evm.TU.supercontig_900.5 Carica papaya evm.TU.supercontig_900.5 N 0.000
GLYMA10G40080 Glycine max GLYMA10G40080 N 0.812
GLYMA20G27330 Glycine max GLYMA20G27330 N 0.854
Gorai.012G163200 Gossypium raimondii Gorai.012G163200 N 0.708
Gorai.N026300 Gossypium raimondii Gorai.N026300 N 0.708
MDP0000233925 Malus domestica MDP0000233925 N 0.875
MDP0000278770 Malus domestica MDP0000278770 N 0.875
mgf022790m Mimulus guttatus mgf022790m N 0.750
MTR_1g012570 Medicago truncatula MTR_1g012570 N 0.854
MTR_1g105905 Medicago truncatula MTR_1g105905 N 0.812
MTR_1g105910 Medicago truncatula MTR_1g105910 N 0.854
MTR_1g105920 Medicago truncatula MTR_1g105920 N 0.854
MTR_2g030740 Medicago truncatula MTR_2g030740 N 0.812
MTR_2g093190 Medicago truncatula MTR_2g093190 N 0.792
MTR_3g052870 Medicago truncatula MTR_3g052870 N 0.854
MTR_3g052920 Medicago truncatula MTR_3g052920 N 0.854
MTR_5g055100 Medicago truncatula MTR_5g055100 N 0.833
MTR_8g043650 Medicago truncatula MTR_8g043650 N 0.854
OPUNC12G11630 Oryza punctata OPUNC12G11630 I 0.000
orange1.1g039654m.g Citrus sinensis orange1.1g039654m.g N 0.938
Pm021017 Prunus mume Pm021017 N 0.812
Pm021018 Prunus mume Pm021018 N 0.896
Pm021071 Prunus mume Pm021071 N 0.917
POPTR_0009s08750 Populus trichocarpa POPTR_0009s08750 N 0.917
PRUPE_ppa022494mg Prunus persica PRUPE_ppa022494mg N 0.812
PRUPE_ppa026089mg Prunus persica PRUPE_ppa026089mg N 0.896
PRUPE_ppa026127mg Prunus persica PRUPE_ppa026127mg N 0.917
SapurV1A.0019s0690 Salix purpurea SapurV1A.0019s0690 N 0.938
scaffold_801621.1 Arabidopsis lyrata scaffold_801621.1 I 0.000
Thhalv10015908m.g Eutrema salsugineum Thhalv10015908m.g N 0.875
VIT_03s0088g00510 Vitis vinifera VIT_03s0088g00510 N 0.896
VIT_03s0088g00600 Vitis vinifera VIT_03s0088g00600 N 0.875